Clone BO06326 Report

Search the DGRC for BO06326

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:63
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG5107-RA
Protein status:BO06326.pep: validated full length
Sequenced Size:673

Clone Sequence Records

BO06326.3prime Sequence

671 bp (670 high quality bases) assembled on 2005-12-03

> BO06326.3prime
ATGGTCTAGAAAGCTTGCCATAGACTCGATGCAGACATCAATGTTGGGCA
GAAAAGAGTTAAAGGACGCTGTAACTTTATTGGTGGCATTTACGAAGCAG
GAACTGGTATCGGCTGGCAATTTGGCAATCAGTTTTAGGGTTTTATTGAT
CTTTCGGGTCAGCCTCATGGATGCCTTGAACAATTTCCAGAAGCATTTGG
CCGAGTTTTTGATGGACGAGCCCACGGACTTATCCGTGGCACAAAGTTTC
GAATGCAGATGCAAAATATCGTCGCAGATTTTGATAATCTCCTTAACGGA
GTCCACAATCTTGGCCACATCCTTGGGAATGGCAGTGCCACAGGCATCAA
TAGCATCCACATAGCTGGTGCATGAACTAAGGATGTTTGTCACCTCCTTG
ATAATACAGTTGGTGCCTCGAACCGTTTTCAATGCCTTGCGAAGGATTTT
AAGGCATGTTCTAATAAAGCCCTGTGCCTCCACATCCATGTAGTCAGTGT
CATTGTCCAGTTCATCCAGCAACTGCTCCAATTCCGATTCAAAGTCGAAA
TCATAGTCGAAGTTCTCGTTCTCCAGCAATTCTATTGCATTGGCCCGCGT
GGTCAGCAGACAGGTGGCCGAAACCAGAACCAAAAGGCAAACGGTGATGG
CTTTCATGTCGACTGATAACT

BO06326.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-PA 642 CG5107-RA 1..639 657..19 3195 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:21:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-RA 681 CG5107-RA 27..665 657..19 3195 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:21:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25505339..25505915 595..19 2885 100 Minus
3R 32079331 3R 25505217..25505280 657..594 320 100 Minus
Blast to na_te.dros performed on 2015-02-12 16:21:19 has no hits.

BO06326.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:28 Download gff for BO06326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-PA 1..642 15..657 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:17:59 Download gff for BO06326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-PA 1..642 15..657 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:12:55 Download gff for BO06326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 3..646 15..659 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:41:10 Download gff for BO06326.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 20..668 15..665 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:41:10 Download gff for BO06326.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25505210..25505279 595..665 95 -> Minus
3R 25505340..25505918 15..594 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:12:55 Download gff for BO06326.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21330932..21331001 595..665 95 -> Minus
arm_3R 21331062..21331640 15..594 99   Minus

BO06326.5prime Sequence

671 bp (670 high quality bases) assembled on 2005-12-03

> BO06326.5prime
GAAGTTATCAGTCGACATGAAAGCCATCACCGTTTGCCTTTTGGTTCTGG
TTTCGGCCACCTGTCTGCTGACCACGCGGGCCAATGCAATAGAATTGCTG
GAGAACGAGAACTTCGACTATGATTTCGACTTTGAATCGGAATTGGAGCA
GTTGCTGGATGAACTGGACAATGACACTGACTACATGGATGTGGAGGCAC
AGGGCTTTATTAGAACATGCCTTAAAATCCTTCGCAAGGCATTGAAAACG
GTTCGAGGCACCAACTGTATTATCAAGGAGGTGACAAACATCCTTAGTTC
ATGCACCAGCTATGTGGATGCTATTGATGCCTGTGGCACTGCCATTCCCA
AGGATGTGGCCAAGATTGTGGACTCCGTTAAGGAGATTATCAAAATCTGC
GACGATATTTTGCATCTGCATTCGAAACTTTGTGCCACGGATAAGTCCGT
GGGCTCGTCCATCAAAAACTCGGCCAAATGCTTCTGGAAATTGTTCAAGG
CATCCATGAGGCTGACCCGAAAGATCAATAAAACCCTAAAACTGATTGCC
AAATTGCCAGCCGATACCAGTTCCTGCTTCGTAAATGCCACCAATAAAGT
TACAGCGTCCTTTAACTCTTTTCTGCCCAACATTGATGTCTGCATCGAGT
CTATGGCAAGCTTTCTAGACC

BO06326.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-PA 642 CG5107-RA 1..639 17..655 3195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-RA 681 CG5107-RA 27..665 17..655 3195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25505339..25505915 79..655 2885 100 Plus
3R 32079331 3R 25505217..25505280 17..80 320 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:31:58 has no hits.

BO06326.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:29 Download gff for BO06326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-PA 1..642 17..659 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:01 Download gff for BO06326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-PA 1..642 17..659 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:58:29 Download gff for BO06326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 3..646 15..659 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:16:27 Download gff for BO06326.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 20..668 9..659 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:16:27 Download gff for BO06326.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25505210..25505279 9..79 95 -> Plus
3R 25505340..25505918 80..659 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:58:29 Download gff for BO06326.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21330932..21331001 9..79 95 -> Plus
arm_3R 21331062..21331640 80..659 99   Plus

BO06326.complete Sequence

673 bp (673 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630349

> BO06326.complete
GAAGTTATCAGTCGACATGAAAGCCATCACCGTTTGCCTTTTGGTTCTGG
TTTCGGCCACCTGTCTGCTGACCACGCGGGCCAATGCAATAGAATTGCTG
GAGAACGAGAACTTCGACTATGATTTCGACTTTGAATCGGAATTGGAGCA
GTTGCTGGATGAACTGGACAATGACACTGACTACATGGATGTGGAGGCAC
AGGGCTTTATTAGAACATGCCTTAAAATCCTTCGCAAGGCATTGAAAACG
GTTCGAGGCACCAACTGTATTATCAAGGAGGTGACAAACATCCTTAGTTC
ATGCACCAGCTATGTGGATGCTATTGATGCCTGTGGCACTGCCATTCCCA
AGGATGTGGCCAAGATTGTGGACTCCGTTAAGGAGATTATCAAAATCTGC
GACGATATTTTGCATCTGCATTCGAAACTTTGTGCCACGGATAAGTCCGT
GGGCTCGTCCATCAAAAACTCGGCCAAATGCTTCTGGAAATTGTTCAAGG
CATCCATGAGGCTGACCCGAAAGATCAATAAAACCCTAAAACTGATTGCC
AAATTGCCAGCCGATACCAGTTCCTGCTTCGTAAATGCCACCAATAAAGT
TACAGCGTCCTTTAACTCTTTTCTGCCCAACATTGATGTCTGCATCGAGT
CTATGGCAAGCTTTCTAGACCAT

BO06326.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-RA 642 CG5107-PA 1..639 17..655 3195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-RA 681 CG5107-RA 27..665 17..655 3195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25505339..25505915 79..655 2885 100 Plus
3R 32079331 3R 25505217..25505280 17..80 320 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:36:07 has no hits.

BO06326.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:18 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 1..642 17..659 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:30 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 3..646 15..659 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:27:50 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 5..643 17..657 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:18 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 3..646 15..659 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:34:41 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
CG5107-RA 27..665 17..657 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:34:41 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25505217..25505279 17..79 100 -> Plus
3R 25505340..25505915 80..657 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:27:50 Download gff for BO06326.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21330939..21331001 17..79 100 -> Plus
arm_3R 21331062..21331637 80..657 99   Plus

BO06326.pep Sequence

Translation from 16 to 673

> BO06326.pep
MKAITVCLLVLVSATCLLTTRANAIELLENENFDYDFDFESELEQLLDEL
DNDTDYMDVEAQGFIRTCLKILRKALKTVRGTNCIIKEVTNILSSCTSYV
DAIDACGTAIPKDVAKIVDSVKEIIKICDDILHLHSKLCATDKSVGSSIK
NSAKCFWKLFKASMRLTRKINKTLKLIAKLPADTSSCFVNATNKVTASFN
SFLPNIDVCIESMASFLDH

BO06326.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG5107-PA 213 CG5107-PA 1..213 1..213 1084 100 Plus
CG8664-PB 214 CG8664-PB 1..213 1..213 415 43 Plus
CG8664-PA 214 CG8664-PA 1..213 1..213 415 43 Plus
CG8661-PA 198 CG8661-PA 31..193 49..209 231 32.1 Plus