Clone Sequence Records
BO06331.3prime Sequence
677 bp (676 high quality bases) assembled on 2005-12-03
> BO06331.3prime
ATGGTCTAGAAAGCTTGCCGCCGTGGAGTTGGCCGTTTCGGTGATCTTCT
GGCGCACCTGCTGCACCACATCCGCTACGTTGTTCACAAACGAAAGCCAC
ATGGCCTTGATTCTGGTGCCCAGGCCCAAGGGATCCGCTCCGTCCATATT
CTGTGTCACTTCCATGCCCTTCTCCTCCTGCCGTCGTCGTCGCACCAACT
TCTTGTTCTTTTTGCCAGTGGTCTTGGGACTCACTCGGGATCGGGAGGCA
TTGTTGGCGGCCCGCTTTTGAGCTCGTCTCCGTCTGGCCTCCACGTCATC
GTCGGCGGACGCCGCTGTGGTGGCGGCAGCGCTCATTTTCCAGAAGCAAG
GAGCGCGTTTGAGGCGATGCAGGCTCCGCCGCCTTCGCTTCCGACGACGA
TCCTCCTCGGATGAATCGGTGGCAATGGGACGTATGGCATCTCCATAGCC
AACGGCCGTTTTCGAGTGCACGGACATCAGGGGATTGTCAATGTCGACGT
CGCGGGAGATGGCGGCGCCACTCTGAACTGCCTCCGCTATATTTCCGGCC
AGAGACATGGCGCCCATGCCCAGCGACTCTAGCGGATTCTGTGGACCTGG
CCTGGCCGCAATCATGGCCAGACCCGCGACAACCAGGAGAAGTGCCAGCT
GATGGCGATTCATGTCGACTGATAACT
BO06331.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-PA | 648 | CG6290-RA | 1..645 | 663..19 | 3225 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:11:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..659 | 663..19 | 3225 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:11:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438148 | 663..19 | 3225 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-09 19:11:51 has no hits.
BO06331.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:36 Download gff for
BO06331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 18..663 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:11 Download gff for
BO06331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 18..663 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:32 Download gff for
BO06331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 19..663 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:17:52 Download gff for
BO06331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..659 | 19..663 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:17:52 Download gff for
BO06331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438148 | 19..663 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:32 Download gff for
BO06331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332181 | 19..663 | 100 | | Minus |
BO06331.5prime Sequence
677 bp (676 high quality bases) assembled on 2005-12-03
> BO06331.5prime
GAAGTTATCAGTCGACATGAATCGCCATCAGCTGGCACTTCTCCTGGTTG
TCGCGGGTCTGGCCATGATTGCGGCCAGGCCAGGTCCACAGAATCCGCTA
GAGTCGCTGGGCATGGGCGCCATGTCTCTGGCCGGAAATATAGCGGAGGC
AGTTCAGAGTGGCGCCGCCATCTCCCGCGACGTCGACATTGACAATCCCC
TGATGTCCGTGCACTCGAAAACGGCCGTTGGCTATGGAGATGCCATACGT
CCCATTGCCACCGATTCATCCGAGGAGGATCGTCGTCGGAAGCGAAGGCG
GCGGAGCCTGCATCGCCTCAAACGCGCTCCTTGCTTCTGGAAAATGAGCG
CTGCCGCCACCACAGCGGCGTCCGCCGACGATGACGTGGAGGCCAGACGG
AGACGAGCTCAAAAGCGGGCCGCCAACAATGCCTCCCGATCCCGAGTGAG
TCCCAAGACCACTGGCAAAAAGAACAAGAAGTTGGTGCGACGACGACGGC
AGGAGGAGAAGGGCATGGAAGTGACACAGAATATGGACGGAGCGGATCCC
TTGGGCCTGGGCACCAGAATCAAGGCCATGTGGCTTTCGTTTGTGAACAA
CGTAGCGGATGTGGTGCAGCAGGTGCGCCAGAAGATCACCGAAACGGCCA
ACTCCACGGCGGCAAGCTTTCTAGACC
BO06331.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-PA | 648 | CG6290-RA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:56:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..659 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:56:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438148 | 17..661 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:56:49 has no hits.
BO06331.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:37 Download gff for
BO06331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:13 Download gff for
BO06331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-PA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:07:16 Download gff for
BO06331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:22:19 Download gff for
BO06331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..659 | 17..661 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:22:19 Download gff for
BO06331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438148 | 17..661 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:07:16 Download gff for
BO06331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332181 | 17..661 | 100 | | Plus |
BO06331.complete Sequence
679 bp (679 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630351
> BO06331.complete
GAAGTTATCAGTCGACATGAATCGCCATCAGCTGGCACTTCTCCTGGTTG
TCGCGGGTCTGGCCATGATTGCGGCCAGGCCAGGTCCACAGAATCCGCTA
GAGTCGCTGGGCATGGGCGCCATGTCTCTGGCCGGAAATATAGCGGAGGC
AGTTCAGAGTGGCGCCGCCATCTCCCGCGACGTCGACATTGACAATCCCC
TGATGTCCGTGCACTCGAAAACGGCCGTTGGCTATGGAGATGCCATACGT
CCCATTGCCACCGATTCATCCGAGGAGGATCGTCGTCGGAAGCGAAGGCG
GCGGAGCCTGCATCGCCTCAAACGCGCTCCTTGCTTCTGGAAAATGAGCG
CTGCCGCCACCACAGCGGCGTCCGCCGACGATGACGTGGAGGCCAGACGG
AGACGAGCTCAAAAGCGGGCCGCCAACAATGCCTCCCGATCCCGAGTGAG
TCCCAAGACCACTGGCAAAAAGAACAAGAAGTTGGTGCGACGACGACGGC
AGGAGGAGAAGGGCATGGAAGTGACACAGAATATGGACGGAGCGGATCCC
TTGGGCCTGGGCACCAGAATCAAGGCCATGTGGCTTTCGTTTGTGAACAA
CGTAGCGGATGTGGTGCAGCAGGTGCGCCAGAAGATCACCGAAACGGCCA
ACTCCACGGCGGCAAGCTTTCTAGACCAT
BO06331.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:20:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 648 | CG6290-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:20:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-RA | 744 | CG6290-RA | 15..659 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:20:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18437504..18438148 | 17..661 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:20:15 has no hits.
BO06331.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:35 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:55 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:12:22 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:35 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 1..645 | 17..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:08:30 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6290-RA | 15..659 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:08:30 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18437504..18438148 | 17..663 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:12:22 Download gff for
BO06331.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18331537..18332181 | 17..663 | 99 | | Plus |
BO06331.pep Sequence
Translation from 16 to 679
> BO06331.pep
MNRHQLALLLVVAGLAMIAARPGPQNPLESLGMGAMSLAGNIAEAVQSGA
AISRDVDIDNPLMSVHSKTAVGYGDAIRPIATDSSEEDRRRKRRRRSLHR
LKRAPCFWKMSAAATTAASADDDVEARRRRAQKRAANNASRSRVSPKTTG
KKNKKLVRRRRQEEKGMEVTQNMDGADPLGLGTRIKAMWLSFVNNVADVV
QQVRQKITETANSTAASFLDH
BO06331.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6290-PA | 215 | CG6290-PA | 1..215 | 1..215 | 1071 | 100 | Plus |
