Clone Sequence Records
BO06337.5prime Sequence
626 bp (625 high quality bases) assembled on 2005-12-03
> BO06337.5prime
GAAGTTATCAGTCGACATGGCAAGTCACAGCTTTTTGTGTTTACAGGAGA
ACGAGTACTTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCTGAAA
GTTTCCCGGGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAA
GCCGGCCAAGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGATTCGG
AGCCAGCTTCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGAC
GCCATTCGGCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGT
GCCTCCGCACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAA
TCCTAACCGGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCG
AAAAAACAACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACT
ACAGACTGCTCCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTG
CCCGCCAGCTGCAGGAGCGACGACCGACGCCGTTGGAGCTATTGAGTCCG
GAATGCACTTCGGCCACCGTGCCCACAACGATGCTCAGCGATGAAAGCCC
CTCTAAGTGGGCAAGCTTTCTAGACC
BO06337.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-PC | 597 | CG18004-RC | 1..594 | 17..610 | 2970 | 100 | Plus |
CG18004-PB | 876 | CG18004-RB | 217..779 | 47..609 | 2815 | 100 | Plus |
CG18004-PA | 894 | CG18004-RA | 235..797 | 47..609 | 2815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:08:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-RA | 1044 | CG18004-RA | 317..879 | 47..609 | 2815 | 100 | Plus |
CG18004-RB | 1168 | CG18004-RB | 441..1003 | 47..609 | 2815 | 100 | Plus |
CG18004-RD | 1026 | CG18004-RD | 317..861 | 65..609 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10885560..10886153 | 17..610 | 2970 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:08:07 has no hits.
BO06337.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:45 Download gff for
BO06337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-PC | 1..597 | 17..614 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:24 Download gff for
BO06337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-PC | 1..597 | 17..614 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:59:39 Download gff for
BO06337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 441..1003 | 47..609 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:07:45 Download gff for
BO06337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 441..1003 | 47..609 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:07:45 Download gff for
BO06337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10885560..10886156 | 17..614 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:59:39 Download gff for
BO06337.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6773065..6773661 | 17..614 | 99 | | Plus |
BO06337.3prime Sequence
626 bp (625 high quality bases) assembled on 2005-12-03
> BO06337.3prime
ATGGTCTAGAAAGCTTGCCCACTTAGAGGGGCTTTCATCGCTGAGCATCG
TTGTGGGCACGGTGGCCGAAGTGCATTCCGGACTCAATAGCTCCAACGGC
GTCGGTCGTCGCTCCTGCAGCTGGCGGGCAATCTCCGCTTGGCTGAGGCC
GGGCGACACATCCTTCGGAGCAGTCTGTAGTTGCGGTGGCTGCTGCGAAG
GTGACACCGTGGCGGTAAGTTGTTTTTTCGCAGCAATTGCTGGGATTCCA
TGGTTCGCGGGCAACATTCCGGTTAGGATTTTTCGTCTTCGACCTCGTGG
GGCGCCCACTGTGGGCATGTGCGGAGGCACACCTGGAATTCCTGGTGCCC
CCTTGTCTTTGTGCTTGCGCCGAATGGCGTCCTTGGATGTTTGCGATCCG
CCGGCAACGCCGGACGTAGAAGCTGGCTCCGAATCGGAGCTGTCGGTGGC
ATCCGAGTCGCTAGAGTCCTTGGCCGGCTTCTCGTACACCAGCAGACGGT
CCAGCAGGAAGGTACGATCCCGGGAAACTTTCAGCAGACGCCGCTGGTTG
GTGTGCAATAGATCCTGGAAGTACTCGTTCTCCTGTAAACACAAAAAGCT
GTGACTTGCCATGTCGACTGATAACT
BO06337.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-PC | 597 | CG18004-RC | 1..594 | 612..19 | 2970 | 100 | Minus |
CG18004-PB | 876 | CG18004-RB | 217..779 | 582..20 | 2815 | 100 | Minus |
CG18004-PA | 894 | CG18004-RA | 235..797 | 582..20 | 2815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:06:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-RA | 1044 | CG18004-RA | 317..879 | 582..20 | 2815 | 100 | Minus |
CG18004-RB | 1168 | CG18004-RB | 441..1003 | 582..20 | 2815 | 100 | Minus |
CG18004-RD | 1026 | CG18004-RD | 317..861 | 564..20 | 2725 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:06:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10885560..10886153 | 612..19 | 2970 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:06:56 has no hits.
BO06337.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:46:43 Download gff for
BO06337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-PC | 1..597 | 15..612 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:22 Download gff for
BO06337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-PC | 1..597 | 15..612 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:58:04 Download gff for
BO06337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 441..1003 | 20..582 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:26:00 Download gff for
BO06337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 441..1003 | 20..582 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:26:00 Download gff for
BO06337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10885560..10886156 | 15..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:58:04 Download gff for
BO06337.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6773065..6773661 | 15..612 | 99 | | Minus |
BO06337.complete Sequence
628 bp (628 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630354
> BO06337.complete
GAAGTTATCAGTCGACATGGCAAGTCACAGCTTTTTGTGTTTACAGGAGA
ACGAGTACTTCCAGGATCTATTGCACACCAACCAGCGGCGTCTGCTGAAA
GTTTCCCGGGATCGTACCTTCCTGCTGGACCGTCTGCTGGTGTACGAGAA
GCCGGCCAAGGACTCTAGCGACTCGGATGCCACCGACAGCTCCGATTCGG
AGCCAGCTTCTACGTCCGGCGTTGCCGGCGGATCGCAAACATCCAAGGAC
GCCATTCGGCGCAAGCACAAAGACAAGGGGGCACCAGGAATTCCAGGTGT
GCCTCCGCACATGCCCACAGTGGGCGCCCCACGAGGTCGAAGACGAAAAA
TCCTAACCGGAATGTTGCCCGCGAACCATGGAATCCCAGCAATTGCTGCG
AAAAAACAACTTACCGCCACGGTGTCACCTTCGCAGCAGCCACCGCAACT
ACAGACTGCTCCGAAGGATGTGTCGCCCGGCCTCAGCCAAGCGGAGATTG
CCCGCCAGCTGCAGGAGCGACGACCGACGCCGTTGGAGCTATTGAGTCCG
GAATGCACTTCGGCCACCGTGCCCACAACGATGCTCAGCGATGAAAGCCC
CTCTAAGTGGGCAAGCTTTCTAGACCAT
BO06337.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:18:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-RA | 894 | CG18004-PA | 235..797 | 47..609 | 2815 | 100 | Plus |
CG18004-RB | 876 | CG18004-PB | 217..779 | 47..609 | 2815 | 100 | Plus |
CG18004-RD | 876 | CG18004-PD | 235..779 | 65..609 | 2725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:18:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-RA | 1044 | CG18004-RA | 317..879 | 47..609 | 2815 | 100 | Plus |
CG18004-RB | 1168 | CG18004-RB | 441..1003 | 47..609 | 2815 | 100 | Plus |
CG18004-RD | 1026 | CG18004-RD | 317..861 | 65..609 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:18:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10885560..10886153 | 17..610 | 2970 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:18:41 has no hits.
BO06337.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:38 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RC | 1..597 | 17..614 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:59 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RC | 237..833 | 17..614 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:45:53 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 441..1003 | 47..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:38 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RC | 237..833 | 17..614 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:50:34 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18004-RB | 441..1003 | 47..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:50:34 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10885560..10886153 | 17..612 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:45:53 Download gff for
BO06337.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6773065..6773658 | 17..612 | 99 | | Plus |
BO06337.pep Sequence
Translation from 16 to 628
> BO06337.pep
MASHSFLCLQENEYFQDLLHTNQRRLLKVSRDRTFLLDRLLVYEKPAKDS
SDSDATDSSDSEPASTSGVAGGSQTSKDAIRRKHKDKGAPGIPGVPPHMP
TVGAPRGRRRKILTGMLPANHGIPAIAAKKQLTATVSPSQQPPQLQTAPK
DVSPGLSQAEIARQLQERRPTPLELLSPECTSATVPTTMLSDESPSKWAS
FLDH
BO06337.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:23:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18004-PB | 291 | CG18004-PB | 71..259 | 9..197 | 956 | 98.9 | Plus |
CG18004-PA | 297 | CG18004-PA | 77..265 | 9..197 | 956 | 98.9 | Plus |
CG18004-PD | 291 | CG18004-PD | 79..259 | 17..197 | 921 | 100 | Plus |