Clone Sequence Records
BO06350.3prime Sequence
737 bp (736 high quality bases) assembled on 2005-12-03
> BO06350.3prime
ATGGTCTAGAAAGCTTGCCTGATGACCGATGGGATGGGGTATGCCCACAC
TTAGACGCTTCTTGGGCTGCTTTGCCGGCGGCTGCGAGGGTCGCGCCACA
TCGCCCACCTGCTCCCGATCCCGGTCCTGTTCCTTTCGCTCACCCGGTGT
CTCCGGCATGGCGGACTCCATTGCAAACTGGGGCGATGTCCTGTCCCCGG
GCGCACCATTTGCACTGGGCACAAGCACGGGCGTTAGATTCTGTCTCATC
ATGGGCGAGGGATTGACGAATATCATCTTGTCGAGCATCTCCTCGCAAAT
ACCGGCGTGACCCTCGCGCACCACGCGCGGCCGGAAGATGTACGAGGTGG
CCGACATGCGGGCATCCATATACTGCACCTGCACCTCCACGGGAAAGTCG
CTGCCCAGTACCTCGCCAATCTCAAACGGAGCGCTGTCCGCCACGTGCAG
TCGCAGCGGCAGGCGCGGCGACATCTTGAAGGTGACGCGCCGCACGAACC
GCGACAGGTCGCCGCCATCGCGACCTGGGCGCAGGTAGACGCCCCACGTC
GGCTCCAGCATGTAGGGCATGTCCGGATCGCACTGTTCCATGCGGCAGCC
GATCACGATGTCCCGACTGATCACACAGCGCCCGGTGACAGTGATCGGCG
GAGTGCGGTTGCAGCTCACCCGCTGGCAGTCATCGACCACATTCTGATGG
CGCAGGAGATTTGTGTAGCTCATGTCGACTGATAACT
BO06350.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-PA | 708 | CG2652-RA | 1..705 | 723..19 | 3525 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 946 | CG2652-RA | 109..813 | 723..19 | 3525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:57:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2682120..2682824 | 19..723 | 3525 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 15:57:24 has no hits.
BO06350.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:05 Download gff for
BO06350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..708 | 18..723 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:53 Download gff for
BO06350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..708 | 18..723 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:07:20 Download gff for
BO06350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..813 | 19..733 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:24:53 Download gff for
BO06350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..813 | 19..733 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:24:53 Download gff for
BO06350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2682120..2682830 | 19..733 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:07:20 Download gff for
BO06350.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2576153..2576863 | 19..733 | 99 | | Plus |
BO06350.5prime Sequence
737 bp (736 high quality bases) assembled on 2005-12-03
> BO06350.5prime
GAAGTTATCAGTCGACATGAGCTACACAAATCTCCTGCGCCATCAGAATG
TGGTCGATGACTGCCAGCGGGTGAGCTGCAACCGCACTCCGCCGATCACT
GTCACCGGGCGCTGTGTGATCAGTCGGGACATCGTGATCGGCTGCCGCAT
GGAACAGTGCGATCCGGACATGCCCTACATGCTGGAGCCGACGTGGGGCG
TCTACCTGCGCCCAGGTCGCGATGGCGGCGACCTGTCGCGGTTCGTGCGG
CGCGTCACCTTCAAGATGTCGCCGCGCCTGCCGCTGCGACTGCACGTGGC
GGACAGCGCTCCGTTTGAGATTGGCGAGGTACTGGGCAGCGACTTTCCCG
TGGAGGTGCAGGTGCAGTATATGGATGCCCGCATGTCGGCCACCTCGTAC
ATCTTCCGGCCGCGCGTGGTGCGCGAGGGTCACGCCGGTATTTGCGAGGA
GATGCTCGACAAGATGATATTCGTCAATCCCTCGCCCATGATGAGACAGA
ATCTAACGCCCGTGCTTGTGCCCAGTGCAAATGGTGCGCCCGGGGACAGG
ACATCGCCCCAGTTTGCAATGGAGTCCGCCATGCCGGAGACACCGGGTGA
GCGAAAGGAACAGGACCGGGATCGGGAGCAGGTGGGCGATGTGGCGCGAC
CCTCGCAGCCGCCGGCAAAGCAGCCCAAGAAGCGTCTAAGTGTGGGCATA
CCCCATCCCATCGGTCATCAGGCAAGCTTTCTAGACC
BO06350.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-PA | 708 | CG2652-RA | 1..705 | 17..721 | 3525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 946 | CG2652-RA | 109..813 | 17..721 | 3525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2682120..2682824 | 721..17 | 3525 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:08:26 has no hits.
BO06350.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:05 Download gff for
BO06350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..708 | 17..722 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:55 Download gff for
BO06350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-PA | 1..708 | 17..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:59:42 Download gff for
BO06350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..813 | 7..721 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:08:25 Download gff for
BO06350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..813 | 7..721 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:08:25 Download gff for
BO06350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2682120..2682830 | 7..721 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:59:42 Download gff for
BO06350.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2576153..2576863 | 7..721 | 99 | | Minus |
BO06350.complete Sequence
739 bp (739 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630358
> BO06350.complete
GAAGTTATCAGTCGACATGAGCTACACAAATCTCCTGCGCCATCAGAATG
TGGTCGATGACTGCCAGCGGGTGAGCTGCAACCGCACTCCGCCGATCACT
GTCACCGGGCGCTGTGTGATCAGTCGGGACATCGTGATCGGCTGCCGCAT
GGAACAGTGCGATCCGGACATGCCCTACATGCTGGAGCCGACGTGGGGCG
TCTACCTGCGCCCAGGTCGCGATGGCGGCGACCTGTCGCGGTTCGTGCGG
CGCGTCACCTTCAAGATGTCGCCGCGCCTGCCGCTGCGACTGCACGTGGC
GGACAGCGCTCCGTTTGAGATTGGCGAGGTACTGGGCAGCGACTTTCCCG
TGGAGGTGCAGGTGCAGTATATGGATGCCCGCATGTCGGCCACCTCGTAC
ATCTTCCGGCCGCGCGTGGTGCGCGAGGGTCACGCCGGTATTTGCGAGGA
GATGCTCGACAAGATGATATTCGTCAATCCCTCGCCCATGATGAGACAGA
ATCTAACGCCCGTGCTTGTGCCCAGTGCAAATGGTGCGCCCGGGGACAGG
ACATCGCCCCAGTTTGCAATGGAGTCCGCCATGCCGGAGACACCGGGTGA
GCGAAAGGAACAGGACCGGGATCGGGAGCAGGTGGGCGATGTGGCGCGAC
CCTCGCAGCCGCCGGCAAAGCAGCCCAAGAAGCGTCTAAGTGTGGGCATA
CCCCATCCCATCGGTCATCAGGCAAGCTTTCTAGACCAT
BO06350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:35:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 708 | CG2652-PA | 1..705 | 17..721 | 3525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:35:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-RA | 946 | CG2652-RA | 109..813 | 17..721 | 3525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:35:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2682120..2682824 | 721..17 | 3525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:35:12 has no hits.
BO06350.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:33:03 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 1..708 | 17..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:55:56 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..813 | 7..721 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:19 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 109..813 | 17..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:33:03 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 103..813 | 7..721 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:11:30 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2652-RA | 109..813 | 17..723 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:11:30 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2682118..2682824 | 17..723 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:19 Download gff for
BO06350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2576151..2576857 | 17..723 | 99 | | Minus |
BO06350.pep Sequence
Translation from 16 to 739
> BO06350.pep
MSYTNLLRHQNVVDDCQRVSCNRTPPITVTGRCVISRDIVIGCRMEQCDP
DMPYMLEPTWGVYLRPGRDGGDLSRFVRRVTFKMSPRLPLRLHVADSAPF
EIGEVLGSDFPVEVQVQYMDARMSATSYIFRPRVVREGHAGICEEMLDKM
IFVNPSPMMRQNLTPVLVPSANGAPGDRTSPQFAMESAMPETPGERKEQD
RDREQVGDVARPSQPPAKQPKKRLSVGIPHPIGHQASFLDH
BO06350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2652-PA | 235 | CG2652-PA | 1..235 | 1..235 | 1253 | 100 | Plus |
