Clone Sequence Records
BO06352.3prime Sequence
662 bp (661 high quality bases) assembled on 2005-12-03
> BO06352.3prime
ATGGTCTAGAAAGCTTGCCCAACTCAGGCTTATCGACTCCTTGTTTAGGG
ATCCTGGATTGATGGCCTCCATCTTGCGCATTCCCTTGCTGTCCACTACA
TACACCTCAAAGTTCCGCTGGTTGATGATCAGTCGCCTTTGGATCTCCAG
GACGCACTTCTTCATCAGCGAGTAGGCATCCTCTTGGCTGAGCTTCGAGT
TCCAATATCTCTGCAGAATGCTGCCACAGAACATGCTGCCCCAACCATGA
CCTGCATGATTGATTGACTGAGCAGCGCCATAGGAGTCGATGTAGTGGAG
GTCAGGTCCCTCAACCGCATCGTATCCTGCCAGGAGCATTGCCACCTGGT
ATCTGGTGTTGGTCCTTATATAATCCGCCAGTGTTTTCCTGGTAAAATGG
GCAGCTGACTTCGCACTTAGATGGTATCCGTGGGAAATCTTGTACAGATG
CAAATTTTTGGATATGAAGTCGGTGAACTGAATGGTATCGCCACCATCAC
CCACCGTGGCCATCATATTGAAGTCTGATAGTCGGTGGATTTTTGATTGG
TCATCTTTCATGAAGACCAGCGATTTGGCCTGCATTGTATCTGATGCTAG
CATCACAAAGTCTGGTCCCTTGATCCCCAAAATAGTTTCCATCGCCATGT
CGACTGATAACT
BO06352.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17302-PA | 633 | CG17302-RA | 1..630 | 648..19 | 3150 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:41:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta4R2-RB | 1647 | CG17302-RB | 66..696 | 649..19 | 3155 | 100 | Minus |
Prosbeta4R2-RA | 757 | CG17302-RA | 66..696 | 649..19 | 3155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:41:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2655618..2656151 | 552..19 | 2670 | 100 | Minus |
2L | 23513712 | 2L | 2655459..2655556 | 649..552 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:41:13 has no hits.
BO06352.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:08 Download gff for
BO06352.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-PA | 1..633 | 15..648 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:58 Download gff for
BO06352.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-PA | 1..633 | 15..648 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:41:40 Download gff for
BO06352.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta4R2-RA | 66..702 | 13..649 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:23:16 Download gff for
BO06352.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta4R2-RA | 66..702 | 13..649 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:23:16 Download gff for
BO06352.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2655459..2655556 | 552..649 | 100 | -> | Minus |
2L | 2655619..2656157 | 13..551 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:41:40 Download gff for
BO06352.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2655459..2655556 | 552..649 | 100 | -> | Minus |
arm_2L | 2655619..2656157 | 13..551 | 99 | | Minus |
BO06352.5prime Sequence
662 bp (661 high quality bases) assembled on 2005-12-03
> BO06352.5prime
GAAGTTATCAGTCGACATGGCGATGGAAACTATTTTGGGGATCAAGGGAC
CAGACTTTGTGATGCTAGCATCAGATACAATGCAGGCCAAATCGCTGGTC
TTCATGAAAGATGACCAATCAAAAATCCACCGACTATCAGACTTCAATAT
GATGGCCACGGTGGGTGATGGTGGCGATACCATTCAGTTCACCGACTTCA
TATCCAAAAATTTGCATCTGTACAAGATTTCCCACGGATACCATCTAAGT
GCGAAGTCAGCTGCCCATTTTACCAGGAAAACACTGGCGGATTATATAAG
GACCAACACCAGATACCAGGTGGCAATGCTCCTGGCAGGATACGATGCGG
TTGAGGGACCTGACCTCCACTACATCGACTCCTATGGCGCTGCTCAGTCA
ATCAATCATGCAGGTCATGGTTGGGGCAGCATGTTCTGTGGCAGCATTCT
GCAGAGATATTGGAACTCGAAGCTCAGCCAAGAGGATGCCTACTCGCTGA
TGAAGAAGTGCGTCCTGGAGATCCAAAGGCGACTGATCATCAACCAGCGG
AACTTTGAGGTGTATGTAGTGGACAGCAAGGGAATGCGCAAGATGGAGGC
CATCAATCCAGGATCCCTAAACAAGGAGTCGATAAGCCTGAGTTGGGCAA
GCTTTCTAGACC
BO06352.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:39:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17302-PA | 633 | CG17302-RA | 1..630 | 17..646 | 3150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:23:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta4R2-RB | 1647 | CG17302-RB | 66..696 | 16..646 | 3155 | 100 | Plus |
Prosbeta4R2-RA | 757 | CG17302-RA | 66..696 | 16..646 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:23:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2655618..2656151 | 113..646 | 2670 | 100 | Plus |
2L | 23513712 | 2L | 2655459..2655556 | 16..113 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:23:13 has no hits.
BO06352.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:09 Download gff for
BO06352.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-PA | 1..633 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:18:59 Download gff for
BO06352.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-PA | 1..633 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:39:12 Download gff for
BO06352.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta4R2-RA | 66..702 | 16..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:40:15 Download gff for
BO06352.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta4R2-RA | 66..702 | 16..652 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:40:15 Download gff for
BO06352.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2655459..2655556 | 16..113 | 100 | -> | Plus |
2L | 2655619..2656157 | 114..652 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:39:12 Download gff for
BO06352.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2655459..2655556 | 16..113 | 100 | -> | Plus |
arm_2L | 2655619..2656157 | 114..652 | 99 | | Plus |
BO06352.complete Sequence
664 bp (664 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630360
> BO06352.complete
GAAGTTATCAGTCGACATGGCGATGGAAACTATTTTGGGGATCAAGGGAC
CAGACTTTGTGATGCTAGCATCAGATACAATGCAGGCCAAATCGCTGGTC
TTCATGAAAGATGACCAATCAAAAATCCACCGACTATCAGACTTCAATAT
GATGGCCACGGTGGGTGATGGTGGCGATACCATTCAGTTCACCGACTTCA
TATCCAAAAATTTGCATCTGTACAAGATTTCCCACGGATACCATCTAAGT
GCGAAGTCAGCTGCCCATTTTACCAGGAAAACACTGGCGGATTATATAAG
GACCAACACCAGATACCAGGTGGCAATGCTCCTGGCAGGATACGATGCGG
TTGAGGGACCTGACCTCCACTACATCGACTCCTATGGCGCTGCTCAGTCA
ATCAATCATGCAGGTCATGGTTGGGGCAGCATGTTCTGTGGCAGCATTCT
GCAGAGATATTGGAACTCGAAGCTCAGCCAAGAGGATGCCTACTCGCTGA
TGAAGAAGTGCGTCCTGGAGATCCAAAGGCGACTGATCATCAACCAGCGG
AACTTTGAGGTGTATGTAGTGGACAGCAAGGGAATGCGCAAGATGGAGGC
CATCAATCCAGGATCCCTAAACAAGGAGTCGATAAGCCTGAGTTGGGCAA
GCTTTCTAGACCAT
BO06352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta4R2-RB | 633 | CG17302-PB | 1..630 | 17..646 | 3150 | 100 | Plus |
Prosbeta4R2-RA | 633 | CG17302-PA | 1..630 | 17..646 | 3150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:01:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta4R2-RB | 1647 | CG17302-RB | 66..696 | 16..646 | 3155 | 100 | Plus |
Prosbeta4R2-RA | 757 | CG17302-RA | 66..696 | 16..646 | 3155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:01:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2655618..2656151 | 113..646 | 2670 | 100 | Plus |
2L | 23513712 | 2L | 2655459..2655556 | 16..113 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:01:43 has no hits.
BO06352.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:34:51 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-RA | 1..633 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:55:57 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-RA | 66..702 | 16..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:04:57 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta4R2-RA | 67..696 | 17..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:34:52 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17302-RA | 66..702 | 16..652 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:18 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosbeta4R2-RA | 67..696 | 17..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:18 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2655460..2655556 | 17..113 | 100 | -> | Plus |
2L | 2655619..2656151 | 114..648 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:04:57 Download gff for
BO06352.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2655460..2655556 | 17..113 | 100 | -> | Plus |
arm_2L | 2655619..2656151 | 114..648 | 99 | | Plus |
BO06352.pep Sequence
Translation from 16 to 664
> BO06352.pep
MAMETILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVG
DGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRY
QVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWN
SKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRKMEAINPGS
LNKESISLSWASFLDH
BO06352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:38:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosbeta4R2-PB | 210 | CG17302-PB | 1..210 | 1..210 | 1094 | 100 | Plus |
Prosbeta4R2-PA | 210 | CG17302-PA | 1..210 | 1..210 | 1094 | 100 | Plus |
Prosbeta4-PB | 201 | CG17331-PB | 1..199 | 3..201 | 609 | 55.3 | Plus |
Prosbeta4-PA | 201 | CG17331-PA | 1..199 | 3..201 | 609 | 55.3 | Plus |
Prosbeta4R1-PA | 215 | CG17301-PA | 1..205 | 3..207 | 525 | 43.9 | Plus |