Clone Sequence Records
BO06364.3prime Sequence
587 bp (586 high quality bases) assembled on 2005-12-03
> BO06364.3prime
ATGGTCTTGAAAGCTTGCCCACAGGCCCGACGAGTAGCCGCCTGGGGGAA
TGCGGTTCTTGTTGATCACCGGAGTGCCGCCATTGGACGACTCCTGGCGC
TGGGAATACTCGTTGGCTACGACCTTGTAGCCCTCGCCTGTGACGGGGTT
GCCCTCTCGGATCTTTAGCTTCTTGGGCTTGAGGCCGCCAACACCATCTC
CGTTGAGGCCGAGGCCCGTGATCGGATTGCGTGAATCGAGTTTGGAGCAC
GCCTGCTGCTCCTCCTTAATCTCGTTTGGACAGAGCCCAAGGGGCTCCTT
TACATTGCTCACGCCTGCCATCTTGTTCAGCGAGTATGGCTGTTCGGGAT
TATTTCCAGAGTCTCGCCGAGTTTGACAGCCCTCGTTCACCTGATCGGAC
TTTGTGACTGTGCTGTTATCTGCCGGCACGTCTCCAACTTCGCTATCTCG
GCACGAGTTATCAATGGATAGGGCGTCGTCAGCCGGTGGAATTGGCGTTT
CGGTTCGAGCCGGTTCTGGGGGACACAAGGATACGCGTGGGGATGTTTCT
TTGGTGTCTGGTCTTGTGCTCATGTCGACTGATAACT
BO06364.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31363-PB | 558 | Jupiter-RB | 1..555 | 573..19 | 2775 | 100 | Minus |
CG31363-PD | 576 | Jupiter-RD | 435..573 | 157..19 | 695 | 100 | Minus |
CG31363-PH | 609 | Jupiter-RH | 468..606 | 157..19 | 695 | 100 | Minus |
CG31363-PE | 627 | Jupiter-RE | 486..624 | 157..19 | 695 | 100 | Minus |
CG31363-PC | 594 | Jupiter-RC | 453..591 | 157..19 | 695 | 100 | Minus |
CG31363-PA | 594 | Jupiter-RA | 455..591 | 155..19 | 685 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:08:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jupiter-RB | 1583 | CG31363-RB | 244..798 | 573..19 | 2775 | 100 | Minus |
Jupiter-RC | 1581 | CG31363-RC | 658..796 | 157..19 | 695 | 100 | Minus |
Jupiter-RE | 1658 | CG31363-RE | 735..873 | 157..19 | 695 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:08:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11591501..11591911 | 156..566 | 2055 | 100 | Plus |
3R | 32079331 | 3R | 11591171..11591309 | 19..157 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:08:45 has no hits.
BO06364.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:25 Download gff for
BO06364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31363-PB | 1..558 | 15..573 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:19:20 Download gff for
BO06364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31363-PB | 1..558 | 15..573 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:59:45 Download gff for
BO06364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 236..801 | 15..582 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:08:57 Download gff for
BO06364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 236..801 | 15..582 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:08:57 Download gff for
BO06364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11591168..11591307 | 15..155 | 98 | <- | Plus |
3R | 11591501..11591917 | 156..574 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:59:45 Download gff for
BO06364.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7416890..7417029 | 15..155 | 98 | <- | Plus |
arm_3R | 7417223..7417639 | 156..574 | 99 | | Plus |
BO06364.5prime Sequence
587 bp (586 high quality bases) assembled on 2005-12-03
> BO06364.5prime
GAAGTTATCAGTCGACATGAGCACAAGACCAGACACCAAAGAAACATCCC
CACGCGTATCCTTGTGTCCCCCAGAACCGGCTCGAACCGAAACGCCAATT
CCACCGGCTGACGACGCCCTATCCATTGATAACTCGTGCCGAGATAGCGA
AGTTGGAGACGTGCCGGCAGATAACAGCACAGTCACAAAGTCCGATCAGG
TGAACGAGGGCTGTCAAACTCGGCGAGACTCTGGAAATAATCCCGAACAG
CCATACTCGCTGAACAAGATGGCAGGCGTGAGCAATGTAAAGGAGCCCCT
TGGGCTCTGTCCAAACGAGATTAAGGAGGAGCAGCAGGCGTGCTCCAAAC
TCGATTCACGCAATCCGATCACGGGCCTCGGCCTCAACGGAGATGGTGTT
GGCGGCCTCAAGCCCAAGAAGCTAAAGATCCGAGAGGGCAACCCCGTCAC
AGGCGAGGGCTACAAGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGT
CGTCCAATGGCGGCACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGC
GGCTACTCGTCGGGCCTGTGGGCAAGCTTTCAAGACC
BO06364.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31363-PB | 558 | Jupiter-RB | 1..555 | 17..571 | 2775 | 100 | Plus |
CG31363-PD | 576 | Jupiter-RD | 435..573 | 433..571 | 695 | 100 | Plus |
CG31363-PH | 609 | Jupiter-RH | 468..606 | 433..571 | 695 | 100 | Plus |
CG31363-PE | 627 | Jupiter-RE | 486..624 | 433..571 | 695 | 100 | Plus |
CG31363-PC | 594 | Jupiter-RC | 453..591 | 433..571 | 695 | 100 | Plus |
CG31363-PA | 594 | Jupiter-RA | 455..591 | 435..571 | 685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:06:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jupiter-RB | 1583 | CG31363-RB | 244..798 | 17..571 | 2775 | 100 | Plus |
Jupiter-RC | 1581 | CG31363-RC | 658..796 | 433..571 | 695 | 100 | Plus |
Jupiter-RE | 1658 | CG31363-RE | 735..873 | 433..571 | 695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:06:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11591501..11591911 | 434..24 | 2055 | 100 | Minus |
3R | 32079331 | 3R | 11591171..11591309 | 571..433 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:06:57 has no hits.
BO06364.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:26 Download gff for
BO06364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31363-PB | 1..558 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:19:22 Download gff for
BO06364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31363-PB | 1..558 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:52:48 Download gff for
BO06364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 236..801 | 8..575 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:54:25 Download gff for
BO06364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 236..801 | 8..575 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:54:25 Download gff for
BO06364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11591168..11591307 | 435..575 | 98 | <- | Minus |
3R | 11591501..11591917 | 16..434 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:52:48 Download gff for
BO06364.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7416890..7417029 | 435..575 | 98 | <- | Minus |
arm_3R | 7417223..7417639 | 16..434 | 99 | | Minus |
BO06364.complete Sequence
589 bp assembled on 2008-08-15
> BO06364.complete
GAAGTTATCAGTCGACATGAGCACAAGACCAGACACCAAAGAAACATCCC
CACGCGTATCCTTGTGTCCCCCAGAACCGGCTCGAACCGAAACGCCAATT
CCACCGGCTGACGACGCCCTATCCATTGATAACTCGTGCCGAGATAGCGA
AGTTGGAGACGTGCCGGCAGATAACAGCACAGTCACAAAGTCCGATCAGG
TGAACGAGGGCTGTCAAACTCGGCGAGACTCTGGAAATAATCCCGAACAG
CCATACTCGCTGAACAAGATGGCAGGCGTGAGCAATGTAAAGGAGCCCCT
TGGGCTCTGTCCAAACGAGATTAAGGAGGAGCAGCAGGCGTGCTCCAAAC
TCGATTCACGCAATCCGATCACGGGCCTCGGCCTCAACGGAGATGGTGTT
GGCGGCCTCAAGCCCAAGAAGCTAAAGATCCGAGAGGGCAACCCCGTCAC
AGGCGAGGGCTACAAGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGT
CGTCCAATGGCGGCACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGC
GGCTACTCGTCGGGCCTGTGGGCAAGCTTTCAAGACCAT
BO06364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jupiter-RB | 558 | CG31363-PB | 1..555 | 17..571 | 2775 | 100 | Plus |
Jupiter-RC | 594 | CG31363-PC | 453..591 | 433..571 | 695 | 100 | Plus |
Jupiter-RE | 627 | CG31363-PE | 486..624 | 433..571 | 695 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jupiter-RB | 1583 | CG31363-RB | 244..798 | 17..571 | 2775 | 100 | Plus |
Jupiter-RC | 1581 | CG31363-RC | 658..796 | 433..571 | 695 | 100 | Plus |
Jupiter-RE | 1658 | CG31363-RE | 735..873 | 433..571 | 695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11591501..11591911 | 434..24 | 2055 | 100 | Minus |
3R | 32079331 | 3R | 11591171..11591309 | 571..433 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:50:10 has no hits.
BO06364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:36:12 Download gff for
BO06364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 236..801 | 8..575 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:55:07 Download gff for
BO06364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 244..798 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:05:40 Download gff for
BO06364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 244..798 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:35 Download gff for
BO06364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Jupiter-RB | 244..798 | 17..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:35 Download gff for
BO06364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11591169..11591307 | 435..573 | 98 | <- | Minus |
3R | 11591501..11591915 | 17..434 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:55:07 Download gff for
BO06364.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7416891..7417029 | 435..573 | 98 | <- | Minus |
arm_3R | 7417223..7417637 | 17..434 | 99 | | Minus |
BO06364.pep Sequence
Translation from 16 to 589
> BO06364.pep
MSTRPDTKETSPRVSLCPPEPARTETPIPPADDALSIDNSCRDSEVGDVP
ADNSTVTKSDQVNEGCQTRRDSGNNPEQPYSLNKMAGVSNVKEPLGLCPN
EIKEEQQACSKLDSRNPITGLGLNGDGVGGLKPKKLKIREGNPVTGEGYK
VVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLWASFQDH
BO06364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Jupiter-PB | 185 | CG31363-PB | 1..185 | 1..185 | 987 | 100 | Plus |
Jupiter-PI | 105 | CG31363-PI | 52..105 | 132..185 | 255 | 88.9 | Plus |
Jupiter-PD | 191 | CG31363-PD | 146..191 | 140..185 | 250 | 100 | Plus |
Jupiter-PC | 197 | CG31363-PC | 152..197 | 140..185 | 250 | 100 | Plus |
Jupiter-PH | 202 | CG31363-PH | 157..202 | 140..185 | 250 | 100 | Plus |