Clone BO06364 Report

Search the DGRC for BO06364

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:63
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptJupiter-RB
Protein status:BO06364.pep: Imported from assembly
Sequenced Size:589

Clone Sequence Records

BO06364.3prime Sequence

587 bp (586 high quality bases) assembled on 2005-12-03

> BO06364.3prime
ATGGTCTTGAAAGCTTGCCCACAGGCCCGACGAGTAGCCGCCTGGGGGAA
TGCGGTTCTTGTTGATCACCGGAGTGCCGCCATTGGACGACTCCTGGCGC
TGGGAATACTCGTTGGCTACGACCTTGTAGCCCTCGCCTGTGACGGGGTT
GCCCTCTCGGATCTTTAGCTTCTTGGGCTTGAGGCCGCCAACACCATCTC
CGTTGAGGCCGAGGCCCGTGATCGGATTGCGTGAATCGAGTTTGGAGCAC
GCCTGCTGCTCCTCCTTAATCTCGTTTGGACAGAGCCCAAGGGGCTCCTT
TACATTGCTCACGCCTGCCATCTTGTTCAGCGAGTATGGCTGTTCGGGAT
TATTTCCAGAGTCTCGCCGAGTTTGACAGCCCTCGTTCACCTGATCGGAC
TTTGTGACTGTGCTGTTATCTGCCGGCACGTCTCCAACTTCGCTATCTCG
GCACGAGTTATCAATGGATAGGGCGTCGTCAGCCGGTGGAATTGGCGTTT
CGGTTCGAGCCGGTTCTGGGGGACACAAGGATACGCGTGGGGATGTTTCT
TTGGTGTCTGGTCTTGTGCTCATGTCGACTGATAACT

BO06364.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31363-PB 558 Jupiter-RB 1..555 573..19 2775 100 Minus
CG31363-PD 576 Jupiter-RD 435..573 157..19 695 100 Minus
CG31363-PH 609 Jupiter-RH 468..606 157..19 695 100 Minus
CG31363-PE 627 Jupiter-RE 486..624 157..19 695 100 Minus
CG31363-PC 594 Jupiter-RC 453..591 157..19 695 100 Minus
CG31363-PA 594 Jupiter-RA 455..591 155..19 685 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:08:46
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RB 1583 CG31363-RB 244..798 573..19 2775 100 Minus
Jupiter-RC 1581 CG31363-RC 658..796 157..19 695 100 Minus
Jupiter-RE 1658 CG31363-RE 735..873 157..19 695 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11591501..11591911 156..566 2055 100 Plus
3R 32079331 3R 11591171..11591309 19..157 695 100 Plus
Blast to na_te.dros performed on 2015-02-13 06:08:45 has no hits.

BO06364.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:25 Download gff for BO06364.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PB 1..558 15..573 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:19:20 Download gff for BO06364.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PB 1..558 15..573 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 17:59:45 Download gff for BO06364.3prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 236..801 15..582 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:08:57 Download gff for BO06364.3prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 236..801 15..582 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:08:57 Download gff for BO06364.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11591168..11591307 15..155 98 <- Plus
3R 11591501..11591917 156..574 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 17:59:45 Download gff for BO06364.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416890..7417029 15..155 98 <- Plus
arm_3R 7417223..7417639 156..574 99   Plus

BO06364.5prime Sequence

587 bp (586 high quality bases) assembled on 2005-12-03

> BO06364.5prime
GAAGTTATCAGTCGACATGAGCACAAGACCAGACACCAAAGAAACATCCC
CACGCGTATCCTTGTGTCCCCCAGAACCGGCTCGAACCGAAACGCCAATT
CCACCGGCTGACGACGCCCTATCCATTGATAACTCGTGCCGAGATAGCGA
AGTTGGAGACGTGCCGGCAGATAACAGCACAGTCACAAAGTCCGATCAGG
TGAACGAGGGCTGTCAAACTCGGCGAGACTCTGGAAATAATCCCGAACAG
CCATACTCGCTGAACAAGATGGCAGGCGTGAGCAATGTAAAGGAGCCCCT
TGGGCTCTGTCCAAACGAGATTAAGGAGGAGCAGCAGGCGTGCTCCAAAC
TCGATTCACGCAATCCGATCACGGGCCTCGGCCTCAACGGAGATGGTGTT
GGCGGCCTCAAGCCCAAGAAGCTAAAGATCCGAGAGGGCAACCCCGTCAC
AGGCGAGGGCTACAAGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGT
CGTCCAATGGCGGCACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGC
GGCTACTCGTCGGGCCTGTGGGCAAGCTTTCAAGACC

BO06364.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG31363-PB 558 Jupiter-RB 1..555 17..571 2775 100 Plus
CG31363-PD 576 Jupiter-RD 435..573 433..571 695 100 Plus
CG31363-PH 609 Jupiter-RH 468..606 433..571 695 100 Plus
CG31363-PE 627 Jupiter-RE 486..624 433..571 695 100 Plus
CG31363-PC 594 Jupiter-RC 453..591 433..571 695 100 Plus
CG31363-PA 594 Jupiter-RA 455..591 435..571 685 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:06:59
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RB 1583 CG31363-RB 244..798 17..571 2775 100 Plus
Jupiter-RC 1581 CG31363-RC 658..796 433..571 695 100 Plus
Jupiter-RE 1658 CG31363-RE 735..873 433..571 695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:06:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11591501..11591911 434..24 2055 100 Minus
3R 32079331 3R 11591171..11591309 571..433 695 100 Minus
Blast to na_te.dros performed on 2015-02-11 03:06:57 has no hits.

BO06364.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:26 Download gff for BO06364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PB 1..558 17..575 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:19:22 Download gff for BO06364.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31363-PB 1..558 17..575 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:52:48 Download gff for BO06364.5prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 236..801 8..575 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:54:25 Download gff for BO06364.5prime
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 236..801 8..575 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:54:25 Download gff for BO06364.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11591168..11591307 435..575 98 <- Minus
3R 11591501..11591917 16..434 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:52:48 Download gff for BO06364.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416890..7417029 435..575 98 <- Minus
arm_3R 7417223..7417639 16..434 99   Minus

BO06364.complete Sequence

589 bp assembled on 2008-08-15

> BO06364.complete
GAAGTTATCAGTCGACATGAGCACAAGACCAGACACCAAAGAAACATCCC
CACGCGTATCCTTGTGTCCCCCAGAACCGGCTCGAACCGAAACGCCAATT
CCACCGGCTGACGACGCCCTATCCATTGATAACTCGTGCCGAGATAGCGA
AGTTGGAGACGTGCCGGCAGATAACAGCACAGTCACAAAGTCCGATCAGG
TGAACGAGGGCTGTCAAACTCGGCGAGACTCTGGAAATAATCCCGAACAG
CCATACTCGCTGAACAAGATGGCAGGCGTGAGCAATGTAAAGGAGCCCCT
TGGGCTCTGTCCAAACGAGATTAAGGAGGAGCAGCAGGCGTGCTCCAAAC
TCGATTCACGCAATCCGATCACGGGCCTCGGCCTCAACGGAGATGGTGTT
GGCGGCCTCAAGCCCAAGAAGCTAAAGATCCGAGAGGGCAACCCCGTCAC
AGGCGAGGGCTACAAGGTCGTAGCCAACGAGTATTCCCAGCGCCAGGAGT
CGTCCAATGGCGGCACTCCGGTGATCAACAAGAACCGCATTCCCCCAGGC
GGCTACTCGTCGGGCCTGTGGGCAAGCTTTCAAGACCAT

BO06364.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RB 558 CG31363-PB 1..555 17..571 2775 100 Plus
Jupiter-RC 594 CG31363-PC 453..591 433..571 695 100 Plus
Jupiter-RE 627 CG31363-PE 486..624 433..571 695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-RB 1583 CG31363-RB 244..798 17..571 2775 100 Plus
Jupiter-RC 1581 CG31363-RC 658..796 433..571 695 100 Plus
Jupiter-RE 1658 CG31363-RE 735..873 433..571 695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11591501..11591911 434..24 2055 100 Minus
3R 32079331 3R 11591171..11591309 571..433 695 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:50:10 has no hits.

BO06364.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:36:12 Download gff for BO06364.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 236..801 8..575 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:55:07 Download gff for BO06364.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 244..798 17..573 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 11:05:40 Download gff for BO06364.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 244..798 17..573 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:35 Download gff for BO06364.complete
Subject Subject Range Query Range Percent Splice Strand
Jupiter-RB 244..798 17..573 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:35 Download gff for BO06364.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11591169..11591307 435..573 98 <- Minus
3R 11591501..11591915 17..434 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:55:07 Download gff for BO06364.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7416891..7417029 435..573 98 <- Minus
arm_3R 7417223..7417637 17..434 99   Minus

BO06364.pep Sequence

Translation from 16 to 589

> BO06364.pep
MSTRPDTKETSPRVSLCPPEPARTETPIPPADDALSIDNSCRDSEVGDVP
ADNSTVTKSDQVNEGCQTRRDSGNNPEQPYSLNKMAGVSNVKEPLGLCPN
EIKEEQQACSKLDSRNPITGLGLNGDGVGGLKPKKLKIREGNPVTGEGYK
VVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLWASFQDH

BO06364.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 02:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
Jupiter-PB 185 CG31363-PB 1..185 1..185 987 100 Plus
Jupiter-PI 105 CG31363-PI 52..105 132..185 255 88.9 Plus
Jupiter-PD 191 CG31363-PD 146..191 140..185 250 100 Plus
Jupiter-PC 197 CG31363-PC 152..197 140..185 250 100 Plus
Jupiter-PH 202 CG31363-PH 157..202 140..185 250 100 Plus