Clone Sequence Records
BO06367.3prime Sequence
326 bp (325 high quality bases) assembled on 2005-12-03
> BO06367.3prime
ATGGTCTAGAAAGCTTGCGCGATGCGAAGCAGGTGTTGGGTTTGATCGGA
GTTCGTAGCAGCACTCCACGCCCTCTCCGGCACTCGTGGGACACAATCCC
TTGTTCGAGGTGGGTTCGATGCAGTCCGACTCCGCGACACACAGTCCTCC
GACCATGACGCACTGTCGGTCATTGGGATACACACGCACACCCTGCAGCA
TGTAGTAACTGGGGTCATTCACATCGTTTGTCTCGATGTTGGCCTGAGCC
TGGTGCAGCACTAGGATGCTGCTCACCAGCAGGCAGCACAGCAAGCTCCT
TCTCGGCGACATGTCGACTGATAACT
BO06367.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-PB | 297 | CG10433-RB | 1..294 | 312..19 | 1470 | 100 | Minus |
| CG10433-PA | 384 | CG10433-RA | 1..263 | 312..50 | 1315 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 06:56:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-RB | 1112 | CG10433-RB | 166..459 | 312..19 | 1470 | 100 | Minus |
| CG10433-RC | 1945 | CG10433-RC | 1166..1440 | 312..39 | 1320 | 98.9 | Minus |
| CG10433-RA | 945 | CG10433-RA | 166..440 | 312..39 | 1320 | 98.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 06:56:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21606468..21606617 | 51..200 | 750 | 100 | Plus |
| 2R | 25286936 | 2R | 21606681..21606792 | 201..312 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 06:56:55 has no hits.
BO06367.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:31 Download gff for
BO06367.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-PB | 1..297 | 15..312 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:19:30 Download gff for
BO06367.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-PB | 1..297 | 15..312 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:32:14 Download gff for
BO06367.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 156..462 | 15..322 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 08:19:29 Download gff for
BO06367.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 156..462 | 15..322 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 08:19:29 Download gff for
BO06367.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21606325..21606360 | 15..50 | 94 | <- | Plus |
| 2R | 21606468..21606617 | 51..200 | 100 | <- | Plus |
| 2R | 21606681..21606802 | 201..322 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:32:14 Download gff for
BO06367.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17493973..17494122 | 51..200 | 100 | <- | Plus |
| arm_2R | 17494186..17494307 | 201..322 | 96 | | Plus |
| arm_2R | 17493830..17493865 | 15..50 | 94 | <- | Plus |
BO06367.5prime Sequence
326 bp (325 high quality bases) assembled on 2005-12-03
> BO06367.5prime
GAAGTTATCAGTCGACATGTCGCCGAGAAGGAGCTTGCTGTGCTGCCTGC
TGGTGAGCAGCATCCTAGTGCTGCACCAGGCTCAGGCCAACATCGAGACA
AACGATGTGAATGACCCCAGTTACTACATGCTGCAGGGTGTGCGTGTGTA
TCCCAATGACCGACAGTGCGTCATGGTCGGAGGACTGTGTGTCGCGGAGT
CGGACTGCATCGAACCCACCTCGAACAAGGGATTGTGTCCCACGAGTGCC
GGAGAGGGCGTGGAGTGCTGCTACGAACTCCGATCAAACCCAACACCTGC
TTCGCATCGCGCAAGCTTTCTAGACC
BO06367.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-PB | 297 | CG10433-RB | 1..294 | 17..310 | 1470 | 100 | Plus |
| CG10433-PA | 384 | CG10433-RA | 1..263 | 17..279 | 1315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:32:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-RB | 1112 | CG10433-RB | 166..459 | 17..310 | 1470 | 100 | Plus |
| CG10433-RC | 1945 | CG10433-RC | 1166..1440 | 17..290 | 1320 | 98.9 | Plus |
| CG10433-RA | 945 | CG10433-RA | 166..440 | 17..290 | 1320 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:32:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21606468..21606617 | 278..129 | 750 | 100 | Minus |
| 2R | 25286936 | 2R | 21606681..21606792 | 128..17 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:32:27 has no hits.
BO06367.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:47:33 Download gff for
BO06367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-PB | 1..297 | 17..314 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:19:31 Download gff for
BO06367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-PB | 1..297 | 17..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:58:34 Download gff for
BO06367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 156..462 | 7..314 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:02:14 Download gff for
BO06367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 156..462 | 7..314 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:02:14 Download gff for
BO06367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21606325..21606360 | 279..314 | 94 | <- | Minus |
| 2R | 21606468..21606617 | 129..278 | 100 | <- | Minus |
| 2R | 21606681..21606802 | 7..128 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:58:34 Download gff for
BO06367.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17493830..17493865 | 279..314 | 94 | <- | Minus |
| arm_2R | 17493973..17494122 | 129..278 | 100 | <- | Minus |
| arm_2R | 17494186..17494307 | 7..128 | 96 | | Minus |
BO06367.complete Sequence
328 bp (328 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630365
> BO06367.complete
GAAGTTATCAGTCGACATGTCGCCGAGAAGGAGCTTGCTGTGCTGCCTGC
TGGTGAGCAGCATCCTAGTGCTGCACCAGGCTCAGGCCAACATCGAGACA
AACGATGTGAATGACCCCAGTTACTACATGCTGCAGGGTGTGCGTGTGTA
TCCCAATGACCGACAGTGCGTCATGGTCGGAGGACTGTGTGTCGCGGAGT
CGGACTGCATCGAACCCACCTCGAACAAGGGATTGTGTCCCACGAGTGCC
GGAGAGGGCGTGGAGTGCTGCTACGAACTCCGATCAAACCCAACACCTGC
TTCGCATCGCGCAAGCTTTCTAGACCAT
BO06367.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:44:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-RB | 297 | CG10433-PB | 1..294 | 17..310 | 1470 | 100 | Plus |
| CG10433-RC | 384 | CG10433-PC | 1..263 | 17..279 | 1315 | 100 | Plus |
| CG10433-RA | 384 | CG10433-PA | 1..263 | 17..279 | 1315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-RB | 1112 | CG10433-RB | 166..459 | 17..310 | 1470 | 100 | Plus |
| CG10433-RC | 1945 | CG10433-RC | 1166..1428 | 17..279 | 1315 | 100 | Plus |
| CG10433-RA | 945 | CG10433-RA | 166..428 | 17..279 | 1315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:44:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21606468..21606617 | 278..129 | 750 | 100 | Minus |
| 2R | 25286936 | 2R | 21606681..21606792 | 128..17 | 560 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:44:16 has no hits.
BO06367.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:11 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 1..297 | 17..314 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:21 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 152..458 | 7..314 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:21:36 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 166..459 | 17..312 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:11 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 152..458 | 7..314 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:05 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10433-RB | 166..459 | 17..312 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:05 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21606327..21606360 | 279..312 | 94 | <- | Minus |
| 2R | 21606468..21606617 | 129..278 | 100 | <- | Minus |
| 2R | 21606681..21606792 | 17..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:21:36 Download gff for
BO06367.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17493832..17493865 | 279..312 | 94 | <- | Minus |
| arm_2R | 17493973..17494122 | 129..278 | 100 | <- | Minus |
| arm_2R | 17494186..17494297 | 17..128 | 100 | | Minus |
BO06367.pep Sequence
Translation from 16 to 328
> BO06367.pep
MSPRRSLLCCLLVSSILVLHQAQANIETNDVNDPSYYMLQGVRVYPNDRQ
CVMVGGLCVAESDCIEPTSNKGLCPTSAGEGVECCYELRSNPTPASHRAS
FLDH
BO06367.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:51:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10433-PB | 98 | CG10433-PB | 1..98 | 1..98 | 529 | 100 | Plus |
| CG10433-PC | 127 | CG10433-PC | 1..104 | 1..103 | 488 | 89.4 | Plus |
| CG10433-PA | 127 | CG10433-PA | 1..104 | 1..103 | 488 | 89.4 | Plus |
