Clone BO06385 Report

Search the DGRC for BO06385

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:63
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCG9672-RA
Protein status:BO06385.pep: validated full length
Sequenced Size:793

Clone Sequence Records

BO06385.3prime Sequence

791 bp (790 high quality bases) assembled on 2005-12-03

> BO06385.3prime
ATGGTCTAGAAAGCTTGCTTGCTGCAACTGCTGTTGGATCCAATCGTAGT
TGGCCGCAATGCTAATGAATCGTTCGGGCAGCATTCCGCCGCACTCGCCA
AGGATCTGTGCACCCAGACCCACCAGCTGGCCCTGGTAGACGGCCGGTCC
TCCAATGTCCCCACTGCAGATTCCCTGACGACGGCCATGGCCCAGGCACA
GCACCTGGTCGTCCGCCACCAGCAGCTCATCCCGATTGGCCAGGGCGCAT
TCGCGTGGTGCCATCACCTCGGCGGCTCCTATTTGCAGGGTGCGATGCAT
GTTCACCTCGGACTCGGTGGTGCGGCCCCAGCCGGAGACCTCCACCTGGC
TGCCCATGGGCGGAACGTCCTGGGAGAGTGGAATGGCATTGACTGTCTCA
CTGAAAGTAATCTCCTCCTGCAGACGGAGCAGGGCGATTCCGGTCTTCAG
AGTGCTGTAGTTCGGGTTAATGGTGATCTCCTCCACGCGAATCTGCTTGC
CATTGTAGAGATCCACCGATCCTACGGTCACGGCGAACAGAACAGCAGCC
CATGGGGTATCCTTGCCGTCGGAGCAGACGCAAGAGAGGGCGGTGAGGGC
GTATCGCTGGCCAATGATCACGGCGCCGCAGTTGTAGCTTCCGCCGATGG
AGAGGGCCGCCTGGTAGGGCAGCTGGCCGAGAACGGCATCTTCTCCACCG
GCGATCCTGCCCTGCGGCTGGGCCTCCAGAACTCCGGCGGCCACAAGGAT
TAGTCCAATGGTGAGGGTCAGCTTCATGTCGACTGATAACT

BO06385.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-PA 762 CG9672-RA 1..759 777..19 3795 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:32:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-RA 813 CG9672-RA 30..789 778..19 3800 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:32:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16705995..16706529 19..553 2675 100 Plus
X 23542271 X 16706621..16706845 554..778 1125 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:32:54 has no hits.

BO06385.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:01 Download gff for BO06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-PA 1..762 15..777 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:20:11 Download gff for BO06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-PA 1..762 15..777 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:58:40 Download gff for BO06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 25..792 15..784 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:03:21 Download gff for BO06385.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 25..792 15..784 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:03:21 Download gff for BO06385.3prime
Subject Subject Range Query Range Percent Splice Strand
X 16705991..16706529 15..553 99 <- Plus
X 16706621..16706850 554..784 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:58:40 Download gff for BO06385.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16600024..16600562 15..553 99 <- Plus
arm_X 16600654..16600883 554..784 99   Plus

BO06385.5prime Sequence

791 bp (790 high quality bases) assembled on 2005-12-03

> BO06385.5prime
GAAGTTATCAGTCGACATGAAGCTGACCCTCACCATTGGACTAATCCTTG
TGGCCGCCGGAGTTCTGGAGGCCCAGCCGCAGGGCAGGATCGCCGGTGGA
GAAGATGCCGTTCTCGGCCAGCTGCCCTACCAGGCGGCCCTCTCCATCGG
CGGAAGCTACAACTGCGGCGCCGTGATCATTGGCCAGCGATACGCCCTCA
CCGCCCTCTCTTGCGTCTGCTCCGACGGCAAGGATACCCCATGGGCTGCT
GTTCTGTTCGCCGTGACCGTAGGATCGGTGGATCTCTACAATGGCAAGCA
GATTCGCGTGGAGGAGATCACCATTAACCCGAACTACAGCACTCTGAAGA
CCGGAATCGCCCTGCTCCGTCTGCAGGAGGAGATTACTTTCAGTGAGACA
GTCAATGCCATTCCACTCTCCCAGGACGTTCCGCCCATGGGCAGCCAGGT
GGAGGTCTCCGGCTGGGGCCGCACCACCGAGTCCGAGGTGAACATGCATC
GCACCCTGCAAATAGGAGCCGCCGAGGTGATGGCACCACGCGAATGCGCC
CTGGCCAATCGGGATGAGCTGCTGGTGGCGGACGACCAGGTGCTGTGCCT
GGGCCATGGCCGTCGTCAGGGAATCTGCAGTGGGGACATTGGAGGACCGG
CCGTCTACCAGGGCCAGCTGGTGGGTCTGGGTGCACAGATCCTTGGCGAG
TGCGGCGGAATGCTGCCCGAACGATTCATTAGCATTGCGGCCAACTACGA
TTGGATCCAACAGCAGTTGCAGCAAGCAAGCTTTCTAGACC

BO06385.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-PA 762 CG9672-RA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:44:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-RA 813 CG9672-RA 30..789 16..775 3800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:44:48
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16705995..16706529 775..241 2675 100 Minus
X 23542271 X 16706621..16706845 240..16 1125 100 Minus
Blast to na_te.dros performed on 2015-02-11 22:44:51 has no hits.

BO06385.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:02 Download gff for BO06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-PA 1..762 17..779 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:20:12 Download gff for BO06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-PA 1..762 17..779 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:41:52 Download gff for BO06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 25..792 10..779 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:15:15 Download gff for BO06385.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 25..792 10..779 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:15:15 Download gff for BO06385.5prime
Subject Subject Range Query Range Percent Splice Strand
X 16705991..16706529 241..779 99 <- Minus
X 16706621..16706850 10..240 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:41:52 Download gff for BO06385.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 16600024..16600562 241..779 99 <- Minus
arm_X 16600654..16600883 10..240 99   Minus

BO06385.complete Sequence

793 bp (793 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630370

> BO06385.complete
GAAGTTATCAGTCGACATGAAGCTGACCCTCACCATTGGACTAATCCTTG
TGGCCGCCGGAGTTCTGGAGGCCCAGCCGCAGGGCAGGATCGCCGGTGGA
GAAGATGCCGTTCTCGGCCAGCTGCCCTACCAGGCGGCCCTCTCCATCGG
CGGAAGCTACAACTGCGGCGCCGTGATCATTGGCCAGCGATACGCCCTCA
CCGCCCTCTCTTGCGTCTGCTCCGACGGCAAGGATACCCCATGGGCTGCT
GTTCTGTTCGCCGTGACCGTAGGATCGGTGGATCTCTACAATGGCAAGCA
GATTCGCGTGGAGGAGATCACCATTAACCCGAACTACAGCACTCTGAAGA
CCGGAATCGCCCTGCTCCGTCTGCAGGAGGAGATTACTTTCAGTGAGACA
GTCAATGCCATTCCACTCTCCCAGGACGTTCCGCCCATGGGCAGCCAGGT
GGAGGTCTCCGGCTGGGGCCGCACCACCGAGTCCGAGGTGAACATGCATC
GCACCCTGCAAATAGGAGCCGCCGAGGTGATGGCACCACGCGAATGCGCC
CTGGCCAATCGGGATGAGCTGCTGGTGGCGGACGACCAGGTGCTGTGCCT
GGGCCATGGCCGTCGTCAGGGAATCTGCAGTGGGGACATTGGAGGACCGG
CCGTCTACCAGGGCCAGCTGGTGGGTCTGGGTGCACAGATCCTTGGCGAG
TGCGGCGGAATGCTGCCCGAACGATTCATTAGCATTGCGGCCAACTACGA
TTGGATCCAACAGCAGTTGCAGCAAGCAAGCTTTCTAGACCAT

BO06385.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:11:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-RA 762 CG9672-PA 1..759 17..775 3795 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:11:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-RA 813 CG9672-RA 30..789 16..775 3800 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 16705995..16706529 775..241 2675 100 Minus
X 23542271 X 16706621..16706845 240..16 1125 100 Minus
Blast to na_te.dros performed on 2014-11-27 20:11:52 has no hits.

BO06385.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:15 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 1..762 17..779 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:26 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 21..788 10..779 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:51 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 31..789 17..777 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:15 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 21..788 10..779 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:59 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
CG9672-RA 31..789 17..777 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:59 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
X 16705993..16706529 241..777 99 <- Minus
X 16706621..16706844 17..240 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:51 Download gff for BO06385.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 16600026..16600562 241..777 99 <- Minus
arm_X 16600654..16600877 17..240 100   Minus

BO06385.pep Sequence

Translation from 16 to 793

> BO06385.pep
MKLTLTIGLILVAAGVLEAQPQGRIAGGEDAVLGQLPYQAALSIGGSYNC
GAVIIGQRYALTALSCVCSDGKDTPWAAVLFAVTVGSVDLYNGKQIRVEE
ITINPNYSTLKTGIALLRLQEEITFSETVNAIPLSQDVPPMGSQVEVSGW
GRTTESEVNMHRTLQIGAAEVMAPRECALANRDELLVADDQVLCLGHGRR
QGICSGDIGGPAVYQGQLVGLGAQILGECGGMLPERFISIAANYDWIQQQ
LQQASFLDH

BO06385.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG9672-PA 253 CG9672-PA 1..253 1..253 1297 100 Plus
spheroide-PA 249 CG9675-PA 9..248 7..251 384 37.2 Plus
CG9676-PA 251 CG9676-PA 9..248 9..250 348 33.3 Plus
CG1304-PA 260 CG1304-PA 4..254 1..248 348 34.2 Plus
Ser6-PA 259 CG2071-PA 30..255 23..249 341 34.5 Plus