Clone Sequence Records
BO06403.3prime Sequence
826 bp (823 high quality bases) assembled on 2005-12-03
> BO06403.3prime
ATGGTCTAGAAAGCTTGCGGCCAGTCGGGCGAGGAAAGTGGCCATTAGCA
GGCTCGCAGAGGTCCAGGTGAGATGAAGGGATACGGATGAGCCGGACTGG
GATCCACTGGTCAAGGGCAGGGCTCTGCGGTGCTGCAGCTTGACCCTGTC
GATGTGGGGCTGGCAGGAGGACTCCTTCCTCACGTATCGAAACATGGACT
CCACGATATTGCTGGGAGTGATCGTATCGCACTTCTCCAGCAGACTGACG
GTGCACGTCTCGAATGCGTAGAGGTCGACGCACTGCTTCGGACCCAAGAC
CAGCTGGGGCAGATCCCACTCCGGGCTAATCGACTTGGGCAGATATCCGG
CGAAGGAAGAGTTCAGGCAATTGGCGATGCCTTCGCGACTCTGCTGCAGG
CACTCCGGGCCCTCTTCGGCGATAAAGAGCGCAATCTGGTCTCCGTTCTT
GTAGCATATGAACTCCAGCAGCTTGTCCGCAATCCTCTGCAGCACCGCGT
TGTGGGTCTTCTCATCGGTGGTCAGGCAGGGCAGGATCGCGTCGTTGAAG
TTCTTCAGACAGGTCTTGGCCTGCGGCAATCGGAGGCAATACTTCTCGAA
GACCACGTCCAGGTCGCCCTTGGGACTCGCCTCCTCGATCTCCGCCTGGA
TCTCCGTCATATTGGCCAATCCGGAGAGGCATTCTGCGAGGTGAATGCCC
GCATCCTCGATGGACTTGCTCAGGGCAGAGGCGTTAACAGATCCTTTCGG
CAAATGGTCATTGGCCTTCTCGCACTTCGACTGCAGCCACTTTTGGAAGT
CGGCCAAGGTCACATTGGTGTTTTGC
BO06403.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-PA | 960 | CG14629-RA | 150..957 | 826..19 | 4040 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:59:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-RA | 1107 | CG14629-RA | 165..972 | 826..19 | 4040 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:58:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1051689..1052496 | 826..19 | 4040 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 15:59:01 has no hits.
BO06403.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:29 Download gff for
BO06403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-PA | 150..960 | 15..826 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:20:48 Download gff for
BO06403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-PA | 150..960 | 15..826 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:07:35 Download gff for
BO06403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 165..980 | 9..826 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:31:07 Download gff for
BO06403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 165..980 | 9..826 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:31:07 Download gff for
BO06403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1051689..1052504 | 9..826 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:07:35 Download gff for
BO06403.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 945722..946537 | 9..826 | 99 | | Minus |
BO06403.5prime Sequence
936 bp (693 high quality bases) assembled on 2005-12-03
> BO06403.5prime
GAAGTTATCAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGG
CCTTCGCGGTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTG
GATCCGTCGCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTA
TCTGCCCCAAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAA
AGTGGCTGCAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGA
TCTGTTAACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCA
CCTCGCAGAATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGG
AGATCGAGGAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAG
TATTGCCTCCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGA
CGCGATCCTGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGC
TGCAGAGGATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGA
GACCAGATTGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCA
GAGTCGCGAAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATC
TGCCCAAGTCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGT
CCGAAGCAGTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCT
GCTGGAGAAGTGCGATACGATCACTCCCAGCAATATCGTGGAGTCCATGT
TTCGATACGTGAGGAAGGAGTCCTCCCTGCAGCCCCACATCGACAGGGTC
AAGCTGCAGCACCGCAGAGCCCTGCCCCTTGACAGTGGATCCCAGTCCGG
CTCATCCGTATCCCTTCATCTCACCTGGACCTCTGC
BO06403.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-PA | 960 | CG14629-RA | 1..810 | 17..826 | 4050 | 100 | Plus |
CG14629-PA | 960 | CG14629-RA | 867..920 | 883..936 | 270 | 100 | Plus |
CG14629-PA | 960 | CG14629-RA | 814..861 | 830..877 | 240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:45:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-RA | 1107 | CG14629-RA | 16..935 | 17..936 | 4510 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:45:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1051540..1052459 | 17..936 | 4495 | 99.2 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:45:25 has no hits.
BO06403.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:30 Download gff for
BO06403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-PA | 1..920 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:20:50 Download gff for
BO06403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-PA | 1..920 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:44:03 Download gff for
BO06403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 7..935 | 10..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:45:27 Download gff for
BO06403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 7..935 | 10..936 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:45:27 Download gff for
BO06403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1051531..1052459 | 10..936 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:44:03 Download gff for
BO06403.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 945564..946492 | 10..936 | 99 | | Plus |
BO06403.complete Sequence
991 bp (991 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630379
> BO06403.complete
GAAGTTATCAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGG
CCTTCGCGGTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTG
GATCCGTCGCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTA
TCTGCCCCAAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAA
AGTGGCTGCAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGA
TCTGTTAACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCA
CCTCGCAGAATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGG
AGATCGAGGAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAG
TATTGCCTCCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGA
CGCGATCCTGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGC
TGCAGAGGATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGA
GACCAGATTGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCA
GAGTCGCGAAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATC
TGCCCAAGTCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGT
CCGAAGCAGTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCT
GCTGGAGAAGTGCGATACGATCACTCCCAGCAATATCGTGGAGTCCATGT
TTCGATACGTGAGGAAGGAGTCCTCCTGCCAGCCCCACATCGACAGGGTC
AAGCTGCAGCACCGCAGAGCCCTGCCCTTGACCAGTGGATCCCAGTCCGG
CTCATCCGTATCCCTTCATCTCACCTGGACCTCTGCGAGCCTGCTAATGG
CCACTTTCCTCGCCCGACTGGCCGCAAGCTTTCTAGACCAT
BO06403.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-RA | 960 | CG14629-PA | 1..957 | 17..973 | 4785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:42:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-RA | 1107 | CG14629-RA | 16..972 | 17..973 | 4785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:42:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1051540..1052496 | 17..973 | 4785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:42:08 has no hits.
BO06403.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:04 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 1..960 | 17..977 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:13 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 1..968 | 15..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:57 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 16..972 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:04 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 1..968 | 15..983 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:24:46 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14629-RA | 16..972 | 17..975 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:24:46 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1051540..1052496 | 17..975 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:57 Download gff for
BO06403.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 945573..946529 | 17..975 | 99 | | Plus |
BO06403.pep Sequence
Translation from 16 to 991
> BO06403.pep
MSSWSLCPLLLAFAVHAVLGSVDLAGSLDPSLLENVDVDQLRSNYLPQGL
QNTNVTLADFQKWLQSKCEKANDHLPKGSVNASALSKSIEDAGIHLAECL
SGLANMTEIQAEIEEASPKGDLDVVFEKYCLRLPQAKTCLKNFNDAILPC
LTTDEKTHNAVLQRIADKLLEFICYKNGDQIALFIAEEGPECLQQSREGI
ANCLNSSFAGYLPKSISPEWDLPQLVLGPKQCVDLYAFETCTVSLLEKCD
TITPSNIVESMFRYVRKESSCQPHIDRVKLQHRRALPLTSGSQSGSSVSL
HLTWTSASLLMATFLARLAASFLDH
BO06403.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14629-PA | 319 | CG14629-PA | 1..319 | 1..319 | 1652 | 100 | Plus |
CG11378-PC | 312 | CG11378-PC | 13..308 | 17..315 | 571 | 40.2 | Plus |
CG11378-PB | 312 | CG11378-PB | 13..308 | 17..315 | 571 | 40.2 | Plus |
CG11378-PA | 312 | CG11378-PA | 13..308 | 17..315 | 571 | 40.2 | Plus |
CG9917-PB | 301 | CG9917-PB | 23..290 | 32..311 | 518 | 37.7 | Plus |