Clone BO06403 Report

Search the DGRC for BO06403

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:64
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG14629-RA
Protein status:BO06403.pep: validated full length
Sequenced Size:991

Clone Sequence Records

BO06403.3prime Sequence

826 bp (823 high quality bases) assembled on 2005-12-03

> BO06403.3prime
ATGGTCTAGAAAGCTTGCGGCCAGTCGGGCGAGGAAAGTGGCCATTAGCA
GGCTCGCAGAGGTCCAGGTGAGATGAAGGGATACGGATGAGCCGGACTGG
GATCCACTGGTCAAGGGCAGGGCTCTGCGGTGCTGCAGCTTGACCCTGTC
GATGTGGGGCTGGCAGGAGGACTCCTTCCTCACGTATCGAAACATGGACT
CCACGATATTGCTGGGAGTGATCGTATCGCACTTCTCCAGCAGACTGACG
GTGCACGTCTCGAATGCGTAGAGGTCGACGCACTGCTTCGGACCCAAGAC
CAGCTGGGGCAGATCCCACTCCGGGCTAATCGACTTGGGCAGATATCCGG
CGAAGGAAGAGTTCAGGCAATTGGCGATGCCTTCGCGACTCTGCTGCAGG
CACTCCGGGCCCTCTTCGGCGATAAAGAGCGCAATCTGGTCTCCGTTCTT
GTAGCATATGAACTCCAGCAGCTTGTCCGCAATCCTCTGCAGCACCGCGT
TGTGGGTCTTCTCATCGGTGGTCAGGCAGGGCAGGATCGCGTCGTTGAAG
TTCTTCAGACAGGTCTTGGCCTGCGGCAATCGGAGGCAATACTTCTCGAA
GACCACGTCCAGGTCGCCCTTGGGACTCGCCTCCTCGATCTCCGCCTGGA
TCTCCGTCATATTGGCCAATCCGGAGAGGCATTCTGCGAGGTGAATGCCC
GCATCCTCGATGGACTTGCTCAGGGCAGAGGCGTTAACAGATCCTTTCGG
CAAATGGTCATTGGCCTTCTCGCACTTCGACTGCAGCCACTTTTGGAAGT
CGGCCAAGGTCACATTGGTGTTTTGC

BO06403.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-PA 960 CG14629-RA 150..957 826..19 4040 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 1107 CG14629-RA 165..972 826..19 4040 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1051689..1052496 826..19 4040 100 Minus
Blast to na_te.dros performed on 2015-02-13 15:59:01 has no hits.

BO06403.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:29 Download gff for BO06403.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 150..960 15..826 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:20:48 Download gff for BO06403.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 150..960 15..826 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:07:35 Download gff for BO06403.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 165..980 9..826 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:31:07 Download gff for BO06403.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 165..980 9..826 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:31:07 Download gff for BO06403.3prime
Subject Subject Range Query Range Percent Splice Strand
X 1051689..1052504 9..826 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:07:35 Download gff for BO06403.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 945722..946537 9..826 99   Minus

BO06403.5prime Sequence

936 bp (693 high quality bases) assembled on 2005-12-03

> BO06403.5prime
GAAGTTATCAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGG
CCTTCGCGGTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTG
GATCCGTCGCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTA
TCTGCCCCAAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAA
AGTGGCTGCAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGA
TCTGTTAACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCA
CCTCGCAGAATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGG
AGATCGAGGAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAG
TATTGCCTCCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGA
CGCGATCCTGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGC
TGCAGAGGATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGA
GACCAGATTGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCA
GAGTCGCGAAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATC
TGCCCAAGTCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGT
CCGAAGCAGTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCT
GCTGGAGAAGTGCGATACGATCACTCCCAGCAATATCGTGGAGTCCATGT
TTCGATACGTGAGGAAGGAGTCCTCCCTGCAGCCCCACATCGACAGGGTC
AAGCTGCAGCACCGCAGAGCCCTGCCCCTTGACAGTGGATCCCAGTCCGG
CTCATCCGTATCCCTTCATCTCACCTGGACCTCTGC

BO06403.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-PA 960 CG14629-RA 1..810 17..826 4050 100 Plus
CG14629-PA 960 CG14629-RA 867..920 883..936 270 100 Plus
CG14629-PA 960 CG14629-RA 814..861 830..877 240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 1107 CG14629-RA 16..935 17..936 4510 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:45:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1051540..1052459 17..936 4495 99.2 Plus
Blast to na_te.dros performed on 2015-02-11 22:45:25 has no hits.

BO06403.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:30 Download gff for BO06403.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 1..920 17..936 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:20:50 Download gff for BO06403.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-PA 1..920 17..936 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:44:03 Download gff for BO06403.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 7..935 10..936 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:45:27 Download gff for BO06403.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 7..935 10..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:45:27 Download gff for BO06403.5prime
Subject Subject Range Query Range Percent Splice Strand
X 1051531..1052459 10..936 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:44:03 Download gff for BO06403.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 945564..946492 10..936 99   Plus

BO06403.complete Sequence

991 bp (991 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630379

> BO06403.complete
GAAGTTATCAGTCGACATGTCGAGCTGGTCGCTTTGTCCGCTTTTACTGG
CCTTCGCGGTTCACGCCGTGCTTGGATCTGTGGATTTGGCTGGTTCCCTG
GATCCGTCGCTGCTGGAGAACGTGGATGTGGACCAGCTAAGGTCAAACTA
TCTGCCCCAAGGCCTGCAAAACACCAATGTGACCTTGGCCGACTTCCAAA
AGTGGCTGCAGTCGAAGTGCGAGAAGGCCAATGACCATTTGCCGAAAGGA
TCTGTTAACGCCTCTGCCCTGAGCAAGTCCATCGAGGATGCGGGCATTCA
CCTCGCAGAATGCCTCTCCGGATTGGCCAATATGACGGAGATCCAGGCGG
AGATCGAGGAGGCGAGTCCCAAGGGCGACCTGGACGTGGTCTTCGAGAAG
TATTGCCTCCGATTGCCGCAGGCCAAGACCTGTCTGAAGAACTTCAACGA
CGCGATCCTGCCCTGCCTGACCACCGATGAGAAGACCCACAACGCGGTGC
TGCAGAGGATTGCGGACAAGCTGCTGGAGTTCATATGCTACAAGAACGGA
GACCAGATTGCGCTCTTTATCGCCGAAGAGGGCCCGGAGTGCCTGCAGCA
GAGTCGCGAAGGCATCGCCAATTGCCTGAACTCTTCCTTCGCCGGATATC
TGCCCAAGTCGATTAGCCCGGAGTGGGATCTGCCCCAGCTGGTCTTGGGT
CCGAAGCAGTGCGTCGACCTCTACGCATTCGAGACGTGCACCGTCAGTCT
GCTGGAGAAGTGCGATACGATCACTCCCAGCAATATCGTGGAGTCCATGT
TTCGATACGTGAGGAAGGAGTCCTCCTGCCAGCCCCACATCGACAGGGTC
AAGCTGCAGCACCGCAGAGCCCTGCCCTTGACCAGTGGATCCCAGTCCGG
CTCATCCGTATCCCTTCATCTCACCTGGACCTCTGCGAGCCTGCTAATGG
CCACTTTCCTCGCCCGACTGGCCGCAAGCTTTCTAGACCAT

BO06403.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 960 CG14629-PA 1..957 17..973 4785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:42:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-RA 1107 CG14629-RA 16..972 17..973 4785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1051540..1052496 17..973 4785 100 Plus
Blast to na_te.dros performed on 2014-11-27 16:42:08 has no hits.

BO06403.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:24:04 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 1..960 17..977 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:13 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 1..968 15..983 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:57 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 16..972 17..975 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:24:04 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 1..968 15..983 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:24:46 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
CG14629-RA 16..972 17..975 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:24:46 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
X 1051540..1052496 17..975 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:57 Download gff for BO06403.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 945573..946529 17..975 99   Plus

BO06403.pep Sequence

Translation from 16 to 991

> BO06403.pep
MSSWSLCPLLLAFAVHAVLGSVDLAGSLDPSLLENVDVDQLRSNYLPQGL
QNTNVTLADFQKWLQSKCEKANDHLPKGSVNASALSKSIEDAGIHLAECL
SGLANMTEIQAEIEEASPKGDLDVVFEKYCLRLPQAKTCLKNFNDAILPC
LTTDEKTHNAVLQRIADKLLEFICYKNGDQIALFIAEEGPECLQQSREGI
ANCLNSSFAGYLPKSISPEWDLPQLVLGPKQCVDLYAFETCTVSLLEKCD
TITPSNIVESMFRYVRKESSCQPHIDRVKLQHRRALPLTSGSQSGSSVSL
HLTWTSASLLMATFLARLAASFLDH

BO06403.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14629-PA 319 CG14629-PA 1..319 1..319 1652 100 Plus
CG11378-PC 312 CG11378-PC 13..308 17..315 571 40.2 Plus
CG11378-PB 312 CG11378-PB 13..308 17..315 571 40.2 Plus
CG11378-PA 312 CG11378-PA 13..308 17..315 571 40.2 Plus
CG9917-PB 301 CG9917-PB 23..290 32..311 518 37.7 Plus