Clone Sequence Records
BO06410.3prime Sequence
758 bp (757 high quality bases) assembled on 2005-12-03
> BO06410.3prime
ATGGTCTAGAAAGCTTGCACAACTTGTTTTGAGCGCACTTGTAAAGGATA
TGGCCAGGATGCGTTCGTGCAGGATCATGTAGGAGAAAAACTGCAGGACA
CTGAGGAACAAGTACTCGTTCTTGGGCACATCGAACTGGCGATCATGGAT
TATGGTAGCCGTGTACATCACCATGCAGACGGCCACCAGGGCGAATGTGT
TCCGAACCGCAAAATATATTCCCTGGTAGTTGATAAATAGGACATTGATA
AAGAATATGATCATCATAATGTTGGCTATTGCCACCAAACAGCTGAGCAG
CAGATCACCGGGAACAATGAACATGGGAAAGTAGGCGCCCCAAAATATCG
AGGCCAACATCAAGGCAACCACTACAATGCCGGCGTAGAAGTTGACGAGT
CTATTCTCATTGTGCTTCTGTTCCATGGCTATATAAATAGTTGAGCTTTC
CACGATCGCTGCGATAATGATGTAGTTAAAGGGCACCTTGCGTCCTAGCT
TGGTCCACGATAAAGTGGCGACTGCGAAAAAGGTACACAGAAGCCACCAG
CCGTAGCGCTCCTCCGATCTGCTGTGGCTCAGCATATGGGTGTAACCTAT
AATGATCCACTGTGTCAATGCGATGGCGGCCAGGATCACACTAAGTCCGT
ATATCTTGGCCGCATGACTGATGCTCTCATCCGGTGGCTCGCCATAGACC
TCCTGATCGATGTTCCGAAAAGTGTTTTTTTGAATACTTGGCATGTCGAC
TGATAACT
BO06410.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-PA | 729 | CG9483-RA | 1..726 | 744..19 | 3630 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:34:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 920 | CG9483-RA | 101..826 | 744..19 | 3630 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:34:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8866867..8867592 | 744..19 | 3630 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:34:17 has no hits.
BO06410.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:44 Download gff for
BO06410.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 15..744 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:06 Download gff for
BO06410.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 15..744 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:58:49 Download gff for
BO06410.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..829 | 15..751 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:05:17 Download gff for
BO06410.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..829 | 15..751 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:05:17 Download gff for
BO06410.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8866861..8867595 | 15..751 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:58:49 Download gff for
BO06410.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8866861..8867595 | 15..751 | 99 | | Minus |
BO06410.5prime Sequence
758 bp (757 high quality bases) assembled on 2005-12-03
> BO06410.5prime
GAAGTTATCAGTCGACATGCCAAGTATTCAAAAAAACACTTTTCGGAACA
TCGATCAGGAGGTCTATGGCGAGCCACCGGATGAGAGCATCAGTCATGCG
GCCAAGATATACGGACTTAGTGTGATCCTGGCCGCCATCGCATTGACACA
GTGGATCATTATAGGTTACACCCATATGCTGAGCCACAGCAGATCGGAGG
AGCGCTACGGCTGGTGGCTTCTGTGTACCTTTTTCGCAGTCGCCACTTTA
TCGTGGACCAAGCTAGGACGCAAGGTGCCCTTTAACTACATCATTATCGC
AGCGATCGTGGAAAGCTCAACTATTTATATAGCCATGGAACAGAAGCACA
ATGAGAATAGACTCGTCAACTTCTACGCCGGCATTGTAGTGGTTGCCTTG
ATGTTGGCCTCGATATTTTGGGGCGCCTACTTTCCCATGTTCATTGTTCC
CGGTGATCTGCTGCTCAGCTGTTTGGTGGCAATAGCCAACATTATGATGA
TCATATTCTTTATCAATGTCCTATTTATCAACTACCAGGGAATATATTTT
GCGGTTCGGAACACATTCGCCCTGGTGGCCGTCTGCATGGTGATGTACAC
GGCTACCATAATCCATGATCGCCAGTTCGATGTGCCCAAGAACGAGTACT
TGTTCCTCAGTGTCCTGCAGTTTTTCTCCTACATGATCCTGCACGAACGC
ATCCTGGCCATATCCTTTACAAGTGCGCTCAAAACAAGTTGTGCAAGCTT
TCTAGACC
BO06410.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-PA | 729 | CG9483-RA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:56:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 920 | CG9483-RA | 101..826 | 17..742 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:56:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8866867..8867592 | 17..742 | 3630 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 19:56:32 has no hits.
BO06410.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:45 Download gff for
BO06410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 17..746 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:07 Download gff for
BO06410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-PA | 1..729 | 17..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:21:50 Download gff for
BO06410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..829 | 10..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:45:31 Download gff for
BO06410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..829 | 10..746 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:45:31 Download gff for
BO06410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8866861..8867595 | 10..746 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:21:50 Download gff for
BO06410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8866861..8867595 | 10..746 | 99 | | Plus |
BO06410.complete Sequence
760 bp (760 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630384
> BO06410.complete
GAAGTTATCAGTCGACATGCCAAGTATTCAAAAAAACACTTTTCGGAACA
TCGATCAGGAGGTCTATGGCGAGCCACCGGATGAGAGCATCAGTCATGCG
GCCAAGATATACGGACTTAGTGTGATCCTGGCCGCCATCGCATTGACACA
GTGGATCATTATAGGTTACACCCATATGCTGAGCCACAGCAGATCGGAGG
AGCGCTACGGCTGGTGGCTTCTGTGTACCTTTTTCGCAGTCGCCACTTTA
TCGTGGACCAAGCTAGGACGCAAGGTGCCCTTTAACTACATCATTATCGC
AGCGATCGTGGAAAGCTCAACTATTTATATAGCCATGGAACAGAAGCACA
ATGAGAATAGACTCGTCAACTTCTACGCCGGCATTGTAGTGGTTGCCTTG
ATGTTGGCCTCGATATTTTGGGGCGCCTACTTTCCCATGTTCATTGTTCC
CGGTGATCTGCTGCTCAGCTGTTTGGTGGCAATAGCCAACATTATGATGA
TCATATTCTTTATCAATGTCCTATTTATCAACTACCAGGGAATATATTTT
GCGGTTCGGAACACATTCGCCCTGGTGGCCGTCTGCATGGTGATGTACAC
GGCTACCATAATCCATGATCGCCAGTTCGATGTGCCCAAGAACGAGTACT
TGTTCCTCAGTGTCCTGCAGTTTTTCTCCTACATGATCCTGCACGAACGC
ATCCTGGCCATATCCTTTACAAGTGCGCTCAAAACAAGTTGTGCAAGCTT
TCTAGACCAT
BO06410.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 729 | CG9483-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-RA | 920 | CG9483-RA | 101..826 | 17..742 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8866867..8867592 | 17..742 | 3630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:34:04 has no hits.
BO06410.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:15 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 1..729 | 17..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:27 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..829 | 10..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:02:18 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 101..826 | 17..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:15 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 95..829 | 10..746 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:04:35 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9483-RA | 101..826 | 17..744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:04:35 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8866867..8867592 | 17..744 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:02:18 Download gff for
BO06410.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8866867..8867592 | 17..744 | 99 | | Plus |
BO06410.pep Sequence
Translation from 16 to 760
> BO06410.pep
MPSIQKNTFRNIDQEVYGEPPDESISHAAKIYGLSVILAAIALTQWIIIG
YTHMLSHSRSEERYGWWLLCTFFAVATLSWTKLGRKVPFNYIIIAAIVES
STIYIAMEQKHNENRLVNFYAGIVVVALMLASIFWGAYFPMFIVPGDLLL
SCLVAIANIMMIIFFINVLFINYQGIYFAVRNTFALVAVCMVMYTATIIH
DRQFDVPKNEYLFLSVLQFFSYMILHERILAISFTSALKTSCASFLDH
BO06410.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9483-PA | 242 | CG9483-PA | 1..242 | 1..242 | 1247 | 100 | Plus |
