Clone Sequence Records
BO06417.3prime Sequence
858 bp (836 high quality bases) assembled on 2005-12-03
> BO06417.3prime
ATGGTCTAGAAAGCTTGCGGCCGCCGGAGCTGGTGTTGCTTCGCCCTCGG
GAGCTGCTGGTGCAGGAGTGGCGGCCTCGGCGGCTGGAGCTCCTTCCGCT
GGTGGAGCTGCCGCCGGAGTGGCTCCTTCCGCTGCCGCGGCATCCGGTGC
GGGCGTGGCTGCTCCAGTTGCGTCTGCCGCCGCGGGTGGACCCGTGCCGC
CTGGCGGCACCGTTTGCTCCTGCTCGGCAATGGGTTCCGCGGCGTTTTCC
ATGCCATTCTCGAACACGGGCTCCGTGGTGCCACCACCATCACCTGGAGT
CGGCGCGCCCTCCGCTTCCTTCTCCTTCGAGACCCCGATTTCCGTTGAAT
TCGAATTGTCAGCTGGCCGTGAATCGCTCTCCACACTTTGCTCTTTGATC
CCCGTCTCTTGCTTATCCTTCTGGCCCGCGTCGTGGTGGAAGTGATGCAA
GTGCTCGTGGCTGTGTTTCTGGCCATCCCCACTGTCCTCGGCGGGAACGG
CGCACTTCATCTGGTTCTGTTCGCAGATGAAGTACTTCTTCTCCTGGCAG
TTCACGTCCAGGACGACGGTGACATTGGGCCTGATCCTGATCTCCAGGCA
GTCGTCCAGGTTGGATCGTTGAGTCGGCTCCACAATATTGGAGTCGCCCA
TGTAGCGCACCAGTTTACCGCTGCTGATGTACTTGAAGCGCCCCTCCGAC
TGCAGATCGTTGCCACCGAACCAGAAGTCATCGAAGCCCACCTGTGACGT
CACGTAGTGTACCACCGCCTTGAAGTCCTCCATCGTGGACACGTCGGCCA
GGTTGAGGCCCTTGCGCAGGCAGTTGTTCTGGGCCCCGAACCAGTTGATC
TTTTTGAT
BO06417.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1656-PA | 987 | lectin-46Ca-RA | 145..984 | 858..19 | 4200 | 100 | Minus |
CG1652-PA | 969 | lectin-46Cb-RA | 514..549 | 465..430 | 155 | 97.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 1105 | CG1656-RA | 165..1004 | 858..19 | 4200 | 100 | Minus |
lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 726..652 | 180 | 82.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:09:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9817602..9818434 | 851..19 | 4165 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 03:09:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6879 | 176..16 | 204 | 59.6 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2913 | 182..29 | 153 | 57.8 | Minus |
BO06417.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:57 Download gff for
BO06417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 145..987 | 16..858 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:24 Download gff for
BO06417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 145..987 | 16..858 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:53:00 Download gff for
BO06417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 165..1008 | 15..858 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:27:31 Download gff for
BO06417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 165..1008 | 15..858 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:27:31 Download gff for
BO06417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9817602..9818438 | 15..851 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:53:00 Download gff for
BO06417.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5705107..5705943 | 15..851 | 99 | | Minus |
BO06417.5prime Sequence
911 bp (796 high quality bases) assembled on 2005-12-03
> BO06417.5prime
GAAGTTATCAGTCGACATGAGGATCCTACCAATTGTGATTCTGACCTTGA
TGACGGTCCATTCCGGCTGCGGAAAGAAGCAGAGCAAGAAGGAAAAGGAC
AAGGGTCCCTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTT
CTATGTGGGCATCAAAAAGATCAACTGGTTCGGGGCCCAGAACAACTGCC
TGCGCAAGGGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAG
GCGGTGGTACACTACGTGACGTCACAGGTGGGCTTCGATGACTTCTGGTT
CGGTGGCAACGATCTGCAGTCGGAGGGGCGCTTCAAGTACATCAGCAGCG
GTAAACTGGTGCGCTACATGGGCGACTCCAATATTGTGGAGCCGACTCAA
CGATCCAACCTGGACGACTGCCTGGAGATCAGGATCAGGCCCAATGTCAC
CGTCGTCCTGGACGTGAACTGCCAGGAGAAGAAGTACTTCATCTGCGAAC
AGAACCAGATGAAGTGCGCCGTTCCCGCCGAGGACAGTGGGGATGGCCAG
AAACACAGCCACGAGCACTTGCATCACTTCCACCACGACGCGGGCCAGAA
GGATAAGCAAGAGACGGGGATCAAAGAGCAAAGTGTGGAGAGCGATTCAC
GGCCAGCTGACAATTCGAATTCAACGGAAATCGGGGTCTCGAAGGAGAAG
GAAGCGGAGGGCGCGCCGACTCCAGGTGATGGTGGTGGCACCACGGAGCC
CGTGTTCGAGAATGGCATGNAAAACGCCGCGGAACCCATTGCCGAGCANG
AGCAAACGGTGTCGCCAGGCGGCACGGGGTCACCCGCGGCGGCAGACGCA
ACTGGAGCAGCCACGCCCGCACCGGATGCCGCGGCAGCGGGAGGAGCCAC
TCCGGCGGCAG
BO06417.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1656-PA | 987 | lectin-46Ca-RA | 1..895 | 17..911 | 4337 | 99.3 | Plus |
CG1652-PA | 969 | lectin-46Cb-RA | 514..549 | 554..589 | 155 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:10:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 1105 | CG1656-RA | 20..915 | 16..911 | 4398 | 99.3 | Plus |
lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 293..367 | 180 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:10:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9817602..9818345 | 168..911 | 3638 | 99.2 | Plus |
2R | 25286936 | 2R | 9817319..9817472 | 16..169 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:10:35 has no hits.
BO06417.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:48:58 Download gff for
BO06417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 1..895 | 17..911 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:26 Download gff for
BO06417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1656-PA | 1..895 | 17..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:58:53 Download gff for
BO06417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..915 | 9..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:27:30 Download gff for
BO06417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..915 | 9..911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:27:30 Download gff for
BO06417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9817315..9817472 | 9..169 | 98 | -> | Plus |
2R | 9817604..9818345 | 170..911 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:58:53 Download gff for
BO06417.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5704820..5704977 | 9..169 | 98 | -> | Plus |
arm_2R | 5705109..5705850 | 170..911 | 99 | | Plus |
BO06417.complete Sequence
1018 bp (1018 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630388
> BO06417.complete
GAAGTTATCAGTCGACATGAGGATCCTACCAATTGTGATTCTGACCTTGA
TGACGGTCCATTCCGGCTGCGGAAAGAAGCAGAGCAAGAAGGAAAAGGAC
AAGGGTCCCTGTGGCAAACCGTATCTCAGGGAGCTAAACGGAAAGTGCTT
CTATGTGGGCATCAAAAAGATCAACTGGTTCGGGGCCCAGAACAACTGCC
TGCGCAAGGGCCTCAACCTGGCCGACGTGTCCACGATGGAGGACTTCAAG
GCGGTGGTACACTACGTGACGTCACAGGTGGGCTTCGATGACTTCTGGTT
CGGTGGCAACGATCTGCAGTCGGAGGGGCGCTTCAAGTACATCAGCAGCG
GTAAACTGGTGCGCTACATGGGCGACTCCAATATTGTGGAGCCGACTCAA
CGATCCAACCTGGACGACTGCCTGGAGATCAGGATCAGGCCCAATGTCAC
CGTCGTCCTGGACGTGAACTGCCAGGAGAAGAAGTACTTCATCTGCGAAC
AGAACCAGATGAAGTGCGCCGTTCCCGCCGAGGACAGTGGGGATGGCCAG
AAACACAGCCACGAGCACTTGCATCACTTCCACCACGACGCGGGCCAGAA
GGATAAGCAAGAGACGGGGATCAAAGAGCAAAGTGTGGAGAGCGATTCAC
GGCCAGCTGACAATTCGAATTCAACGGAAATCGGGGTCTCGAAGGAGAAG
GAAGCGGAGGGCGCGCCGACTCCAGGTGATGGTGGTGGCACCACGGAGCC
CGTGTTCGAGAATGGCATGGAAAACGCCGCGGAACCCATTGCCGAGCAGG
AGCAAACGGTGCCGCCAGGCGGCACGGGTCCACCCGCGGCGGCAGACGCA
ACTGGAGCAGCCACGCCCGCACCGGATGCCGCGGCAGCGGAAGGAGCCAC
TCCGGCGGCAGCTCCACCAGCGGAAGGAGCTCCAGCCGCCGAGGCCGCCA
CTCCTGCACCAGCAGCTCCCGAGGGCGAAGCAACACCAGCTCCGGCGGCC
GCAAGCTTTCTAGACCAT
BO06417.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 987 | CG1656-PA | 1..984 | 17..1000 | 4920 | 100 | Plus |
lectin-46Cb-RB | 969 | CG1652-PB | 262..336 | 293..367 | 180 | 82.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-RA | 1105 | CG1656-RA | 20..1004 | 16..1000 | 4925 | 100 | Plus |
lectin-46Cb-RB | 1039 | CG1652-RB | 267..341 | 293..367 | 180 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9817602..9818434 | 168..1000 | 4165 | 100 | Plus |
2R | 25286936 | 2R | 9817319..9817472 | 16..169 | 770 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 13:54:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6879 | 843..1003 | 204 | 59.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2766..2913 | 837..990 | 153 | 57.8 | Plus |
BO06417.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:55 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 1..987 | 17..1003 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:48:02 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..1008 | 9..1004 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:28:16 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 21..1004 | 17..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:56 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 16..1008 | 9..1004 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:58:47 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
lectin-46Ca-RA | 21..1004 | 17..1002 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:58:47 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9817320..9817472 | 17..169 | 100 | -> | Plus |
2R | 9817604..9818434 | 170..1002 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:28:16 Download gff for
BO06417.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5704825..5704977 | 17..169 | 100 | -> | Plus |
arm_2R | 5705109..5705939 | 170..1002 | 99 | | Plus |
BO06417.pep Sequence
Translation from 16 to 1018
> BO06417.pep
MRILPIVILTLMTVHSGCGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIK
KINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDL
QSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDV
NCQEKKYFICEQNQMKCAVPAEDSGDGQKHSHEHLHHFHHDAGQKDKQET
GIKEQSVESDSRPADNSNSTEIGVSKEKEAEGAPTPGDGGGTTEPVFENG
MENAAEPIAEQEQTVPPGGTGPPAAADATGAATPAPDAAAAEGATPAAAP
PAEGAPAAEAATPAPAAPEGEATPAPAAASFLDH
BO06417.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
lectin-46Ca-PA | 328 | CG1656-PA | 1..328 | 1..328 | 1748 | 100 | Plus |
lectin-46Cb-PB | 322 | CG1652-PB | 26..314 | 31..329 | 617 | 47 | Plus |
Tm1-PF | 501 | CG4898-PF | 348..461 | 213..328 | 167 | 45.5 | Plus |
CG9134-PC | 188 | CG9134-PC | 54..184 | 37..161 | 149 | 30.3 | Plus |
CG9134-PA | 188 | CG9134-PA | 54..184 | 37..161 | 149 | 30.3 | Plus |