Clone BO06426 Report

Search the DGRC for BO06426

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:64
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG11455-RA
Protein status:BO06426.pep: validated full length
Sequenced Size:337

Clone Sequence Records

BO06426.5prime Sequence

335 bp (334 high quality bases) assembled on 2005-12-03

> BO06426.5prime
GAAGTTATCAGTCGACATGTCGCTTACCCCCTTTCTACGCCTGCCCTTAA
CCGATCTGACCGGGTGCCTAATTAACCACCAGACCTACGACAAGTGCGGA
AAATTCGAGATGAAAATGATGGAGTGCTTCGAGGCCTATGGCCTGGAGCG
TGGAAAACGGGAGTGCGCCGACCTGATCTCCGACTTTCAGGAGTGCGTCG
GCATGCAGAAGCAACTGATGCGCTTCCATGCAATGCGAAACGAACGCTAC
AAGCAGTGGCTCAAGGGGGAGCGTAAGGGACAAGAATTTTTTGCGGATCC
CCCACGCGTTGATGCCTACGCAAGCTTTCTAGACC

BO06426.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-PA 306 CG11455-RA 1..303 17..319 1515 100 Plus
CG11455-PB 306 CG11455-RB 1..303 17..319 1515 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:48:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-RK 798 CG11455-RK 413..715 17..319 1515 100 Plus
CG11455-RJ 869 CG11455-RJ 484..786 17..319 1515 100 Plus
CG11455-RG 678 CG11455-RG 293..595 17..319 1515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 155572..155785 17..230 1070 100 Plus
2L 23513712 2L 155851..155947 223..319 455 97.9 Plus
Blast to na_te.dros performed 2015-02-11 22:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
3S18 6126 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). 1161..1212 93..144 107 67.3 Plus

BO06426.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:12 Download gff for BO06426.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-PA 1..306 17..320 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:45 Download gff for BO06426.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-PB 1..306 17..320 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:42:00 Download gff for BO06426.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-RG 285..595 9..319 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:23:39 Download gff for BO06426.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-RG 285..595 9..319 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:23:39 Download gff for BO06426.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 155564..155784 9..229 98 -> Plus
2L 155858..155947 230..319 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:42:00 Download gff for BO06426.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 155564..155784 9..229 98 -> Plus
arm_2L 155858..155947 230..319 100   Plus

BO06426.3prime Sequence

335 bp (334 high quality bases) assembled on 2005-12-03

> BO06426.3prime
ATGGTCTAGAAAGCTTGCGTAGGCATCAACGCGTGGGGGATCCGCAAAAA
ATTCTTGTCCCTTACGCTCCCCCTTGAGCCACTGCTTGTAGCGTTCGTTT
CGCATTGCATGGAAGCGCATCAGTTGCTTCTGCATGCCGACGCACTCCTG
AAAGTCGGAGATCAGGTCGGCGCACTCCCGTTTTCCACGCTCCAGGCCAT
AGGCCTCGAAGCACTCCATCATTTTCATCTCGAATTTTCCGCACTTGTCG
TAGGTCTGGTGGTTAATTAGGCACCCGGTCAGATCGGTTAAGGGCAGGCG
TAGAAAGGGGGTAAGCGACATGTCGACTGATAACT

BO06426.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-PA 306 CG11455-RA 1..303 321..19 1515 100 Minus
CG11455-PB 306 CG11455-RB 1..303 321..19 1515 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-RK 798 CG11455-RK 413..715 321..19 1515 100 Minus
CG11455-RJ 869 CG11455-RJ 484..786 321..19 1515 100 Minus
CG11455-RG 678 CG11455-RG 293..595 321..19 1515 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 155572..155785 321..108 1070 100 Minus
2L 23513712 2L 155851..155947 115..19 455 97.9 Minus
Blast to na_te.dros performed 2015-02-11 05:04:04
Subject Length Description Subject Range Query Range Score Percent Strand
3S18 6126 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). 1161..1212 245..194 107 67.3 Minus

BO06426.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:11 Download gff for BO06426.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-PA 1..306 18..321 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:44 Download gff for BO06426.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-PB 1..306 18..321 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:18:37 Download gff for BO06426.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-RG 285..595 19..329 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:44:49 Download gff for BO06426.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11455-RG 285..595 19..329 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:44:49 Download gff for BO06426.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 155564..155784 109..329 98 -> Minus
2L 155858..155947 19..108 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:18:37 Download gff for BO06426.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 155564..155784 109..329 98 -> Minus
arm_2L 155858..155947 19..108 100   Minus

BO06426.complete Sequence

337 bp (337 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630393

> BO06426.complete
GAAGTTATCAGTCGACATGTCGCTTACCCCCTTTCTACGCCTGCCCTTAA
CCGATCTGACCGGGTGCCTAATTAACCACCAGACCTACGACAAGTGCGGA
AAATTCGAGATGAAAATGATGGAGTGCTTCGAGGCCTATGGCCTGGAGCG
TGGAAAACGGGAGTGCGCCGACCTGATCTCCGACTTTCAGGAGTGCGTCG
GCATGCAGAAGCAACTGATGCGCTTCCATGCAATGCGAAACGAACGCTAC
AAGCAGTGGCTCAAGGGGGAGCGTAAGGGACAAGAATTTTTTGCGGATCC
CCCACGCGTTGATGCCTACGCAAGCTTTCTAGACCAT

BO06426.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-RK 306 CG11455-PK 1..303 17..319 1515 100 Plus
CG11455-RJ 306 CG11455-PJ 1..303 17..319 1515 100 Plus
CG11455-RG 306 CG11455-PG 1..303 17..319 1515 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:53:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-RK 798 CG11455-RK 413..715 17..319 1515 100 Plus
CG11455-RJ 869 CG11455-RJ 484..786 17..319 1515 100 Plus
CG11455-RG 678 CG11455-RG 293..595 17..319 1515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 155572..155785 17..230 1070 100 Plus
2L 23513712 2L 155851..155947 223..319 455 97.9 Plus
Blast to na_te.dros performed 2014-11-28 00:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
3S18 6126 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). 1161..1212 93..144 107 67.3 Plus

BO06426.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:25 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
CG11455-RB 1..306 17..320 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:20 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
CG11455-RB 228..538 9..319 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:01:38 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
CG11455-RG 293..595 17..321 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:25 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
CG11455-RB 228..538 9..319 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:24 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
CG11455-RG 293..595 17..321 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:24 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
2L 155572..155784 17..229 100 -> Plus
2L 155858..155947 230..321 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:01:38 Download gff for BO06426.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 155572..155784 17..229 100 -> Plus
arm_2L 155858..155947 230..321 97   Plus

BO06426.pep Sequence

Translation from 16 to 337

> BO06426.pep
MSLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKREC
ADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDA
YASFLDH

BO06426.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG11455-PK 101 CG11455-PK 1..101 1..101 554 100 Plus
CG11455-PJ 101 CG11455-PJ 1..101 1..101 554 100 Plus
CG11455-PG 101 CG11455-PG 1..101 1..101 554 100 Plus
CG11455-PF 101 CG11455-PF 1..101 1..101 554 100 Plus
CG11455-PD 101 CG11455-PD 1..101 1..101 554 100 Plus