Clone Sequence Records
BO06426.5prime Sequence
335 bp (334 high quality bases) assembled on 2005-12-03
> BO06426.5prime
GAAGTTATCAGTCGACATGTCGCTTACCCCCTTTCTACGCCTGCCCTTAA
CCGATCTGACCGGGTGCCTAATTAACCACCAGACCTACGACAAGTGCGGA
AAATTCGAGATGAAAATGATGGAGTGCTTCGAGGCCTATGGCCTGGAGCG
TGGAAAACGGGAGTGCGCCGACCTGATCTCCGACTTTCAGGAGTGCGTCG
GCATGCAGAAGCAACTGATGCGCTTCCATGCAATGCGAAACGAACGCTAC
AAGCAGTGGCTCAAGGGGGAGCGTAAGGGACAAGAATTTTTTGCGGATCC
CCCACGCGTTGATGCCTACGCAAGCTTTCTAGACC
BO06426.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-PA | 306 | CG11455-RA | 1..303 | 17..319 | 1515 | 100 | Plus |
CG11455-PB | 306 | CG11455-RB | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:48:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-RK | 798 | CG11455-RK | 413..715 | 17..319 | 1515 | 100 | Plus |
CG11455-RJ | 869 | CG11455-RJ | 484..786 | 17..319 | 1515 | 100 | Plus |
CG11455-RG | 678 | CG11455-RG | 293..595 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 155572..155785 | 17..230 | 1070 | 100 | Plus |
2L | 23513712 | 2L | 155851..155947 | 223..319 | 455 | 97.9 | Plus |
Blast to na_te.dros performed 2015-02-11 22:48:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1161..1212 | 93..144 | 107 | 67.3 | Plus |
BO06426.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:12 Download gff for
BO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-PA | 1..306 | 17..320 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:45 Download gff for
BO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-PB | 1..306 | 17..320 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:42:00 Download gff for
BO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RG | 285..595 | 9..319 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:23:39 Download gff for
BO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RG | 285..595 | 9..319 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:23:39 Download gff for
BO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 155564..155784 | 9..229 | 98 | -> | Plus |
2L | 155858..155947 | 230..319 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:42:00 Download gff for
BO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 155564..155784 | 9..229 | 98 | -> | Plus |
arm_2L | 155858..155947 | 230..319 | 100 | | Plus |
BO06426.3prime Sequence
335 bp (334 high quality bases) assembled on 2005-12-03
> BO06426.3prime
ATGGTCTAGAAAGCTTGCGTAGGCATCAACGCGTGGGGGATCCGCAAAAA
ATTCTTGTCCCTTACGCTCCCCCTTGAGCCACTGCTTGTAGCGTTCGTTT
CGCATTGCATGGAAGCGCATCAGTTGCTTCTGCATGCCGACGCACTCCTG
AAAGTCGGAGATCAGGTCGGCGCACTCCCGTTTTCCACGCTCCAGGCCAT
AGGCCTCGAAGCACTCCATCATTTTCATCTCGAATTTTCCGCACTTGTCG
TAGGTCTGGTGGTTAATTAGGCACCCGGTCAGATCGGTTAAGGGCAGGCG
TAGAAAGGGGGTAAGCGACATGTCGACTGATAACT
BO06426.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-PA | 306 | CG11455-RA | 1..303 | 321..19 | 1515 | 100 | Minus |
CG11455-PB | 306 | CG11455-RB | 1..303 | 321..19 | 1515 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:04:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-RK | 798 | CG11455-RK | 413..715 | 321..19 | 1515 | 100 | Minus |
CG11455-RJ | 869 | CG11455-RJ | 484..786 | 321..19 | 1515 | 100 | Minus |
CG11455-RG | 678 | CG11455-RG | 293..595 | 321..19 | 1515 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:04:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 155572..155785 | 321..108 | 1070 | 100 | Minus |
2L | 23513712 | 2L | 155851..155947 | 115..19 | 455 | 97.9 | Minus |
Blast to na_te.dros performed 2015-02-11 05:04:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1161..1212 | 245..194 | 107 | 67.3 | Minus |
BO06426.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:11 Download gff for
BO06426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-PA | 1..306 | 18..321 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:21:44 Download gff for
BO06426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-PB | 1..306 | 18..321 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:18:37 Download gff for
BO06426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RG | 285..595 | 19..329 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:44:49 Download gff for
BO06426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RG | 285..595 | 19..329 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:44:49 Download gff for
BO06426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 155564..155784 | 109..329 | 98 | -> | Minus |
2L | 155858..155947 | 19..108 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:18:37 Download gff for
BO06426.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 155564..155784 | 109..329 | 98 | -> | Minus |
arm_2L | 155858..155947 | 19..108 | 100 | | Minus |
BO06426.complete Sequence
337 bp (337 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630393
> BO06426.complete
GAAGTTATCAGTCGACATGTCGCTTACCCCCTTTCTACGCCTGCCCTTAA
CCGATCTGACCGGGTGCCTAATTAACCACCAGACCTACGACAAGTGCGGA
AAATTCGAGATGAAAATGATGGAGTGCTTCGAGGCCTATGGCCTGGAGCG
TGGAAAACGGGAGTGCGCCGACCTGATCTCCGACTTTCAGGAGTGCGTCG
GCATGCAGAAGCAACTGATGCGCTTCCATGCAATGCGAAACGAACGCTAC
AAGCAGTGGCTCAAGGGGGAGCGTAAGGGACAAGAATTTTTTGCGGATCC
CCCACGCGTTGATGCCTACGCAAGCTTTCTAGACCAT
BO06426.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:53:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-RK | 306 | CG11455-PK | 1..303 | 17..319 | 1515 | 100 | Plus |
CG11455-RJ | 306 | CG11455-PJ | 1..303 | 17..319 | 1515 | 100 | Plus |
CG11455-RG | 306 | CG11455-PG | 1..303 | 17..319 | 1515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:53:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-RK | 798 | CG11455-RK | 413..715 | 17..319 | 1515 | 100 | Plus |
CG11455-RJ | 869 | CG11455-RJ | 484..786 | 17..319 | 1515 | 100 | Plus |
CG11455-RG | 678 | CG11455-RG | 293..595 | 17..319 | 1515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:53:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 155572..155785 | 17..230 | 1070 | 100 | Plus |
2L | 23513712 | 2L | 155851..155947 | 223..319 | 455 | 97.9 | Plus |
Blast to na_te.dros performed 2014-11-28 00:53:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 1161..1212 | 93..144 | 107 | 67.3 | Plus |
BO06426.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:05:25 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RB | 1..306 | 17..320 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:20:20 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RB | 228..538 | 9..319 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:01:38 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RG | 293..595 | 17..321 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:05:25 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RB | 228..538 | 9..319 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:24 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11455-RG | 293..595 | 17..321 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:24 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 155572..155784 | 17..229 | 100 | -> | Plus |
2L | 155858..155947 | 230..321 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:01:38 Download gff for
BO06426.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 155572..155784 | 17..229 | 100 | -> | Plus |
arm_2L | 155858..155947 | 230..321 | 97 | | Plus |
BO06426.pep Sequence
Translation from 16 to 337
> BO06426.pep
MSLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKREC
ADLISDFQECVGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDA
YASFLDH
BO06426.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:25:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11455-PK | 101 | CG11455-PK | 1..101 | 1..101 | 554 | 100 | Plus |
CG11455-PJ | 101 | CG11455-PJ | 1..101 | 1..101 | 554 | 100 | Plus |
CG11455-PG | 101 | CG11455-PG | 1..101 | 1..101 | 554 | 100 | Plus |
CG11455-PF | 101 | CG11455-PF | 1..101 | 1..101 | 554 | 100 | Plus |
CG11455-PD | 101 | CG11455-PD | 1..101 | 1..101 | 554 | 100 | Plus |