Clone Sequence Records
BO06433.5prime Sequence
578 bp (577 high quality bases) assembled on 2005-12-03
> BO06433.5prime
GAAGTTATCAGTCGACATGCTCGTTCTGGTACTCGGCGACCTGCACATCC
CGCACCGGTGCAGCAGCCTGCCGGCTAAATTTAAGAAGCTGCTGGTGCCG
GGCCGCATACATCACATCCTGGCCACCGGAAACATCTGCACCAAGGAGTC
CTACGACTACCTGAAGTCCCTGGCCAATGATGTGCACATAGTGCGCGGCG
ACTTCGACGAGAACCTGACGTATCCGGAGCAGAAGGTGGTCACGGTAGGC
CAGTTCCGGATCGGTCTGTGCCACGGCCACCAGGTGGTTCCCCGCGGAGA
CCCGGAGGCGCTGGCCCTCATCCAGCGGCAACTGGACGTGGACATCCTGA
TCACGGGGCACACGTACAAGTTCGAGGCCTACGAGCACGGCAACAAATTC
TACATCAATCCGGGATCGGCCACGGGTGCCTTCAACCCACTGGACACCAA
TGTGGTGCCTTCGTTCGTGCTGATGGACATTCAGAGCACCACGGTGGTCA
CGTACGTGTACCAACTGATCGGCGACGAGGTCAAAGTGGAGCGCATCGAG
TACAAGAAGATCGCAAGCTTTCTAGACC
BO06433.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4764-PA | 549 | CG4764-RA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..643 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:04:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151408 | 17..562 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:04:08 has no hits.
BO06433.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:26 Download gff for
BO06433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:22:03 Download gff for
BO06433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:18:39 Download gff for
BO06433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 98..643 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:45:05 Download gff for
BO06433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 98..643 | 17..562 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:45:05 Download gff for
BO06433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150857..1151408 | 11..562 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:18:39 Download gff for
BO06433.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150857..1151408 | 11..562 | 99 | | Plus |
BO06433.3prime Sequence
578 bp (577 high quality bases) assembled on 2005-12-03
> BO06433.3prime
ATGGTCTAGAAAGCTTGCGATCTTCTTGTACTCGATGCGCTCCACTTTGA
CCTCGTCGCCGATCAGTTGGTACACGTACGTGACCACCGTGGTGCTCTGA
ATGTCCATCAGCACGAACGAAGGCACCACATTGGTGTCCAGTGGGTTGAA
GGCACCCGTGGCCGATCCCGGATTGATGTAGAATTTGTTGCCGTGCTCGT
AGGCCTCGAACTTGTACGTGTGCCCCGTGATCAGGATGTCCACGTCCAGT
TGCCGCTGGATGAGGGCCAGCGCCTCCGGGTCTCCGCGGGGAACCACCTG
GTGGCCGTGGCACAGACCGATCCGGAACTGGCCTACCGTGACCACCTTCT
GCTCCGGATACGTCAGGTTCTCGTCGAAGTCGCCGCGCACTATGTGCACA
TCATTGGCCAGGGACTTCAGGTAGTCGTAGGACTCCTTGGTGCAGATGTT
TCCGGTGGCCAGGATGTGATGTATGCGGCCCGGCACCAGCAGCTTCTTAA
ATTTAGCCGGCAGGCTGCTGCACCGGTGCGGGATGTGCAGGTCGCCGAGT
ACCAGAACGAGCATGTCGACTGATAACT
BO06433.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4764-PA | 549 | CG4764-RA | 1..546 | 564..19 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..643 | 564..19 | 2730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:13:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151408 | 564..19 | 2730 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:13:50 has no hits.
BO06433.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:25 Download gff for
BO06433.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:22:01 Download gff for
BO06433.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-PA | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:16:29 Download gff for
BO06433.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 98..643 | 19..564 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:07:58 Download gff for
BO06433.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 98..643 | 19..564 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:07:58 Download gff for
BO06433.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150857..1151408 | 19..570 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:16:29 Download gff for
BO06433.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150857..1151408 | 19..570 | 99 | | Minus |
BO06433.complete Sequence
580 bp (580 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630398
> BO06433.complete
GAAGTTATCAGTCGACATGCTCGTTCTGGTACTCGGCGACCTGCACATCC
CGCACCGGTGCAGCAGCCTGCCGGCTAAATTTAAGAAGCTGCTGGTGCCG
GGCCGCATACATCACATCCTGGCCACCGGAAACATCTGCACCAAGGAGTC
CTACGACTACCTGAAGTCCCTGGCCAATGATGTGCACATAGTGCGCGGCG
ACTTCGACGAGAACCTGACGTATCCGGAGCAGAAGGTGGTCACGGTAGGC
CAGTTCCGGATCGGTCTGTGCCACGGCCACCAGGTGGTTCCCCGCGGAGA
CCCGGAGGCGCTGGCCCTCATCCAGCGGCAACTGGACGTGGACATCCTGA
TCACGGGGCACACGTACAAGTTCGAGGCCTACGAGCACGGCAACAAATTC
TACATCAATCCGGGATCGGCCACGGGTGCCTTCAACCCACTGGACACCAA
TGTGGTGCCTTCGTTCGTGCTGATGGACATTCAGAGCACCACGGTGGTCA
CGTACGTGTACCAACTGATCGGCGACGAGGTCAAAGTGGAGCGCATCGAG
TACAAGAAGATCGCAAGCTTTCTAGACCAT
BO06433.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:16:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 549 | CG4764-PA | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:16:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-RA | 999 | CG4764-RA | 98..643 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:15:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1150863..1151408 | 17..562 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:15:59 has no hits.
BO06433.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:47 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 1..549 | 17..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:49 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 81..626 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:48:44 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 98..643 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:47 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4764-RA | 81..626 | 17..562 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:19 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps29-RA | 98..643 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:19 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1150863..1151408 | 17..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:48:44 Download gff for
BO06433.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1150863..1151408 | 17..564 | 99 | | Plus |
BO06433.pep Sequence
Translation from 16 to 580
> BO06433.pep
MLVLVLGDLHIPHRCSSLPAKFKKLLVPGRIHHILATGNICTKESYDYLK
SLANDVHIVRGDFDENLTYPEQKVVTVGQFRIGLCHGHQVVPRGDPEALA
LIQRQLDVDILITGHTYKFEAYEHGNKFYINPGSATGAFNPLDTNVVPSF
VLMDIQSTTVVTYVYQLIGDEVKVERIEYKKIASFLDH
BO06433.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:25:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps29-PA | 182 | CG4764-PA | 1..182 | 1..182 | 956 | 100 | Plus |
