Clone Sequence Records
BO06434.3prime Sequence
677 bp (676 high quality bases) assembled on 2005-12-03
> BO06434.3prime
ATGGTCTAGAAAGCTTGCCTTGTCGTATCGAACCAGGCGCGTGTCGTCGC
CGACCTCCTCCAGATCCTTTGGATCGCGGCGGAAGCGATAAGTGCCGACA
TCCTGGTTGGCCGATTCCGGCAACGTCACCTTGATGCCCTTGTACTCGGT
TCGACCTTCCCTGACCTCCGGCACCCGCAGCTCCATCTCGGCCTTGTACT
CGTCATCGTTACCAATGTCCACGTCCTGGACGTTCTTTTGCACGGTGGGA
TCCTCCTCGTCCTGGTTCCAGCCATCAATCTCGATGGGGACAATGGGGTT
GCCGTCGACGCCTACGACGGAACTAGGTGCGCCAGTAGGCAGGATCTCCA
CGGTATCTCCAGAAATCGGATTCTCTGCTGGTGGCGACTCAACTGCATCC
GCGTCCACTATGTTGGTCACCTCTTTGAATGGAGTATGGTCCATCAATGT
CAGCGAATTGACGAAATTGCGATTAAACTCTACGTCAGTCTTGGCCATCT
CATTTATATTGATATCTATCACGGTCACGCCATCGATGTTCCGCGGACGG
TCAATGGTGAGGCAAGTAAGACCAGTAGACATTTTGGAGTGCAAGGTCGA
GCGGGCCACACGGACACGGTGCAGCGCCAGCTGATTCCTCAGCATCGAAA
GATTGCGAAACATGTCGACTGATAACT
BO06434.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-PA | 648 | CG17470-RA | 1..645 | 663..19 | 3225 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-RA | 939 | CG17470-RA | 140..785 | 664..19 | 3230 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:14:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20642460..20643105 | 19..664 | 3230 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:14:40 has no hits.
BO06434.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:27 Download gff for
BO06434.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-PA | 1..648 | 18..663 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:22:04 Download gff for
BO06434.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-PA | 1..648 | 18..663 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:05:58 Download gff for
BO06434.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 19..664 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:18:08 Download gff for
BO06434.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 19..664 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:18:08 Download gff for
BO06434.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20642460..20643105 | 19..664 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:05:58 Download gff for
BO06434.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20642460..20643105 | 19..664 | 100 | | Plus |
BO06434.5prime Sequence
677 bp (676 high quality bases) assembled on 2005-12-03
> BO06434.5prime
GAAGTTATCAGTCGACATGTTTCGCAATCTTTCGATGCTGAGGAATCAGC
TGGCGCTGCACCGTGTCCGTGTGGCCCGCTCGACCTTGCACTCCAAAATG
TCTACTGGTCTTACTTGCCTCACCATTGACCGTCCGCGGAACATCGATGG
CGTGACCGTGATAGATATCAATATAAATGAGATGGCCAAGACTGACGTAG
AGTTTAATCGCAATTTCGTCAATTCGCTGACATTGATGGACCATACTCCA
TTCAAAGAGGTGACCAACATAGTGGACGCGGATGCAGTTGAGTCGCCACC
AGCAGAGAATCCGATTTCTGGAGATACCGTGGAGATCCTGCCTACTGGCG
CACCTAGTTCCGTCGTAGGCGTCGACGGCAACCCCATTGTCCCCATCGAG
ATTGATGGCTGGAACCAGGACGAGGAGGATCCCACCGTGCAAAAGAACGT
CCAGGACGTGGACATTGGTAACGATGACGAGTACAAGGCCGAGATGGAGC
TGCGGGTGCCGGAGGTCAGGGAAGGTCGAACCGAGTACAAGGGCATCAAG
GTGACGTTGCCGGAATCGGCCAACCAGGATGTCGGCACTTATCGCTTCCG
CCGCGATCCAAAGGATCTGGAGGAGGTCGGCGACGACACGCGCCTGGTTC
GATACGACAAGGCAAGCTTTCTAGACC
BO06434.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-PA | 648 | CG17470-RA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:10:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-RA | 939 | CG17470-RA | 140..785 | 16..661 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:10:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20642460..20643105 | 661..16 | 3230 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:10:58 has no hits.
BO06434.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:28 Download gff for
BO06434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-PA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:22:05 Download gff for
BO06434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-PA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:58:59 Download gff for
BO06434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 16..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:27:43 Download gff for
BO06434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 16..661 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:27:43 Download gff for
BO06434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20642460..20643105 | 16..661 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:58:59 Download gff for
BO06434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20642460..20643105 | 16..661 | 100 | | Minus |
BO06434.complete Sequence
679 bp (679 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630399
> BO06434.complete
GAAGTTATCAGTCGACATGTTTCGCAATCTTTCGATGCTGAGGAATCAGC
TGGCGCTGCACCGTGTCCGTGTGGCCCGCTCGACCTTGCACTCCAAAATG
TCTACTGGTCTTACTTGCCTCACCATTGACCGTCCGCGGAACATCGATGG
CGTGACCGTGATAGATATCAATATAAATGAGATGGCCAAGACTGACGTAG
AGTTTAATCGCAATTTCGTCAATTCGCTGACATTGATGGACCATACTCCA
TTCAAAGAGGTGACCAACATAGTGGACGCGGATGCAGTTGAGTCGCCACC
AGCAGAGAATCCGATTTCTGGAGATACCGTGGAGATCCTGCCTACTGGCG
CACCTAGTTCCGTCGTAGGCGTCGACGGCAACCCCATTGTCCCCATCGAG
ATTGATGGCTGGAACCAGGACGAGGAGGATCCCACCGTGCAAAAGAACGT
CCAGGACGTGGACATTGGTAACGATGACGAGTACAAGGCCGAGATGGAGC
TGCGGGTGCCGGAGGTCAGGGAAGGTCGAACCGAGTACAAGGGCATCAAG
GTGACGTTGCCGGAATCGGCCAACCAGGATGTCGGCACTTATCGCTTCCG
CCGCGATCCAAAGGATCTGGAGGAGGTCGGCGACGACACGCGCCTGGTTC
GATACGACAAGGCAAGCTTTCTAGACCAT
BO06434.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:40:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-RA | 648 | CG17470-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:40:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-RA | 939 | CG17470-RA | 140..785 | 16..661 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20642460..20643105 | 661..16 | 3230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:40:26 has no hits.
BO06434.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:48 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:51 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 16..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:57:10 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 147..785 | 23..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:48 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 140..785 | 16..661 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:30 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17470-RA | 147..785 | 23..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:30 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20642458..20643098 | 23..663 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:57:10 Download gff for
BO06434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20642458..20643098 | 23..663 | 99 | | Minus |
BO06434.pep Sequence
Translation from 16 to 679
> BO06434.pep
MFRNLSMLRNQLALHRVRVARSTLHSKMSTGLTCLTIDRPRNIDGVTVID
ININEMAKTDVEFNRNFVNSLTLMDHTPFKEVTNIVDADAVESPPAENPI
SGDTVEILPTGAPSSVVGVDGNPIVPIEIDGWNQDEEDPTVQKNVQDVDI
GNDDEYKAEMELRVPEVREGRTEYKGIKVTLPESANQDVGTYRFRRDPKD
LEEVGDDTRLVRYDKASFLDH
BO06434.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17470-PA | 215 | CG17470-PA | 1..215 | 1..215 | 1113 | 100 | Plus |
