Clone Sequence Records
BO06450.3prime Sequence
752 bp (751 high quality bases) assembled on 2005-12-03
> BO06450.3prime
ATGGTCTAGAAAGCTTGCCATGCGCTCCGAGAGGCGCGAGGCGACTGCCC
GCAGGTTGCCATACACCTTGCTGGGCGGCGAGCCGAGGATTAGGTTGCAG
ACGGCCCGGCGCGCAAGCTGAATGTTCTGGTAGCTGCCCAGGATGTGGAT
CTTGCTATCGGCTAGCACGATGCGGGTCTTGGTCACGTTCTCGATGGTGA
ATTTGGTGCGGCCGCCCTTGCCGGCGAGGCGGCCGATGGCGCGAGACTGG
TGGTCGCCGCGCAGCGTCTTCACGTCCTTGATTTCGAACGACTCGACGAA
CAGGTCCTCCAGACGCAGCAGGGCCAGGGCGTCGTCCACCTCGAAGCCGC
AGAGAAAGGCGCGCACGAAGTCGGCGCCGCGCTGCAGGTTGGCTATGTCC
GGCGTCTCGGGGCCCACACGCAGCTCCACCTGGCGCGCCTTCATGTTGAA
GCGGATCTGCAGCTTCATGTGCTCCACCACGGGCGTAAAGATCTTCATCC
AGTGCTCCTTGAGCGAGGAGTACCTGTGTGGCGGCACGGATACCTTGCGC
AGCTCGCTTCTGGCCCGCTTTGCCTTGGGCGGCGCCGATGCTCGCGAAGA
TCCCAGCACCTGGCCCTCAATGCCGGTCGCCTCGTCCACCTGCATCTCCA
CGTCCTGCTGCCCGCCTCCGCTGGCTCCGCGCTTCGTCGCTCTCTTCGCC
GGCTCGAATGCGTCTGCTCTGATGTTCTCTGCCTCCATGTCGACTGATAA
CT
BO06450.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11738-PA | 723 | l(1)G0004-RA | 1..720 | 738..19 | 3600 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:12:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 955 | CG11738-RA | 89..809 | 739..19 | 3605 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:12:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20391535..20392255 | 739..19 | 3605 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:12:33 has no hits.
BO06450.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:55 Download gff for
BO06450.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 16..738 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:22:43 Download gff for
BO06450.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 16..738 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:00:18 Download gff for
BO06450.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..809 | 19..739 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:15:31 Download gff for
BO06450.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..809 | 19..739 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:15:31 Download gff for
BO06450.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20391535..20392255 | 19..739 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:00:18 Download gff for
BO06450.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20262562..20263282 | 19..739 | 100 | | Minus |
BO06450.5prime Sequence
752 bp (751 high quality bases) assembled on 2005-12-03
> BO06450.5prime
GAAGTTATCAGTCGACATGGAGGCAGAGAACATCAGAGCAGACGCATTCG
AGCCGGCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAG
GACGTGGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCT
GGGATCTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCG
AGCTGCGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAG
CACTGGATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGAT
CCGCTTCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGA
CGCCGGACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTT
CTCTGCGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGA
CCTGTTCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCG
ACCACCAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACC
AAATTCACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAG
CAAGATCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGG
CCGTCTGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAAC
CTGCGGGCAGTCGCCTCGCGCCTCTCGGAGCGCATGGCAAGCTTTCTAGA
CC
BO06450.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11738-PA | 723 | l(1)G0004-RA | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:12:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 955 | CG11738-RA | 89..809 | 16..736 | 3605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:12:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20391535..20392255 | 16..736 | 3605 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 06:12:36 has no hits.
BO06450.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:49:56 Download gff for
BO06450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:22:45 Download gff for
BO06450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11738-PA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:00:19 Download gff for
BO06450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..809 | 16..736 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:15:37 Download gff for
BO06450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 89..809 | 16..736 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:15:37 Download gff for
BO06450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20391535..20392255 | 16..736 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:00:19 Download gff for
BO06450.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20262562..20263282 | 16..736 | 100 | | Plus |
BO06450.complete Sequence
754 bp (754 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630404
> BO06450.complete
GAAGTTATCAGTCGACATGGAGGCAGAGAACATCAGAGCAGACGCATTCG
AGCCGGCGAAGAGAGCGACGAAGCGCGGAGCCAGCGGAGGCGGGCAGCAG
GACGTGGAGATGCAGGTGGACGAGGCGACCGGCATTGAGGGCCAGGTGCT
GGGATCTTCGCGAGCATCGGCGCCGCCCAAGGCAAAGCGGGCCAGAAGCG
AGCTGCGCAAGGTATCCGTGCCGCCACACAGGTACTCCTCGCTCAAGGAG
CACTGGATGAAGATCTTTACGCCCGTGGTGGAGCACATGAAGCTGCAGAT
CCGCTTCAACATGAAGGCGCGCCAGGTGGAGCTGCGTGTGGGCCCCGAGA
CGCCGGACATAGCCAACCTGCAGCGCGGCGCCGACTTCGTGCGCGCCTTT
CTCTGCGGCTTCGAGGTGGACGACGCCCTGGCCCTGCTGCGTCTGGAGGA
CCTGTTCGTCGAGTCGTTCGAAATCAAGGACGTGAAGACGCTGCGCGGCG
ACCACCAGTCTCGCGCCATCGGCCGCCTCGCCGGCAAGGGCGGCCGCACC
AAATTCACCATCGAGAACGTGACCAAGACCCGCATCGTGCTAGCCGATAG
CAAGATCCACATCCTGGGCAGCTACCAGAACATTCAGCTTGCGCGCCGGG
CCGTCTGCAACCTAATCCTCGGCTCGCCGCCCAGCAAGGTGTATGGCAAC
CTGCGGGCAGTCGCCTCGCGCCTCTCGGAGCGCATGGCAAGCTTTCTAGA
CCAT
BO06450.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:29:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 723 | CG11738-PA | 1..720 | 17..736 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-RA | 955 | CG11738-RA | 89..809 | 16..736 | 3605 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:29:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20391535..20392255 | 16..736 | 3605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:29:49 has no hits.
BO06450.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:34 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:32 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 85..805 | 16..736 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:51:19 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 90..809 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:34 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 85..805 | 16..736 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:19:46 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0004-RA | 90..809 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:19:46 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20391536..20392255 | 17..738 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:51:19 Download gff for
BO06450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20262563..20263282 | 17..738 | 99 | | Plus |
BO06450.pep Sequence
Translation from 16 to 754
> BO06450.pep
MEAENIRADAFEPAKRATKRGASGGGQQDVEMQVDEATGIEGQVLGSSRA
SAPPKAKRARSELRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMK
ARQVELRVGPETPDIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVES
FEIKDVKTLRGDHQSRAIGRLAGKGGRTKFTIENVTKTRIVLADSKIHIL
GSYQNIQLARRAVCNLILGSPPSKVYGNLRAVASRLSERMASFLDH
BO06450.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0004-PA | 240 | CG11738-PA | 1..240 | 1..240 | 1208 | 100 | Plus |