Clone BO06457 Report

Search the DGRC for BO06457

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:64
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG8525-RA
Protein status:BO06457.pep: validated full length
Sequenced Size:1075

Clone Sequence Records

BO06457.3prime Sequence

861 bp (805 high quality bases) assembled on 2005-12-03

> BO06457.3prime
ATGGTCTAGAAAGCTTGCCTTCTTCCGCAGCTCCTTGCAGAAGGTCTCGG
CAGCAGCAGCCTCGCGAGACACGGGCACATTTTTCTGAGCCTCATCCTCC
TCGAGTTTTTTGACACCCTGACGCACAACGCGTTCAATGTCGTCCAGCAA
TCCGGAGGCTCCGAAACGGAACCTCTCGGGACGCAACCAGCGGATGCCAA
GAGTTTCGTTGACCAACGTCATCCAGGCGATCGCATCTCGTACAGTCTTT
ACTCCTCCGGCTGGCTTAAGGCCCACAATCTGGCACGTGCGTCGTTTGAA
TTCCTGAATGGCAAATATCATGACCAGGCCAACGGGCAGGGTGGCGTTGA
CTGTCTCCTTTCCCGTTGAGGTCTTGATAAAATCCGCTCCGGCCATCATG
CAAACCATGGCTGCTTTGTAAACATTATCCATGGTGCCCAGCTCCCCGAT
GGCCAGAATTGTTTTTAGGTGAGCCCTTTGTCCACAGGCACTGCGCATAA
GGACCACCTCGTTGTACATGGCCTCCCAGTCGCCAACGAGGGCCAACTGG
CGATTGATCACAATGTCGATCTCTGTGGCTCCAGCAAGAATGGCGTGGCT
GATCTCCTGCAGGCGGGTCTGCAGGCCGTACTGGCCCGTGGGAAATCCCG
TGGCCACCGCTGCAATAGCCACCTTATCCAGTTTGTCGTACTGTTGGATA
GCTAAATAGGCGTCCTTTACCCTGGCGGGATAAACGCAAACGGCGGCCGT
GTGCATCTCTGGGATGAGAGCCCGGTCGAAGAACTTGTCAAAGAACTGCG
GCTCGAAGGGATAGCAGGCGCGTAGGCATAGTCTCCGCACATTGGCAGCC
GTATCATCGCC

BO06457.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-PA 1044 CG8525-RA 199..1041 861..19 4215 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1269 CG8525-RD 318..1160 861..19 4215 100 Minus
CG8525-RA 1378 CG8525-RA 427..1269 861..19 4215 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:09:29
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12425962..12426401 861..422 2200 100 Minus
2R 25286936 2R 12426462..12426866 423..19 2025 100 Minus
Blast to na_te.dros performed on 2015-02-11 03:09:32 has no hits.

BO06457.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:08 Download gff for BO06457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 199..1044 18..861 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:01 Download gff for BO06457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 199..1044 18..861 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:53:03 Download gff for BO06457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 427..1269 19..861 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:28:25 Download gff for BO06457.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 427..1269 19..861 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:28:25 Download gff for BO06457.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12425962..12426399 424..861 100 -> Minus
2R 12426462..12426866 19..423 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:53:03 Download gff for BO06457.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8313467..8313904 424..861 100 -> Minus
arm_2R 8313967..8314371 19..423 100   Minus

BO06457.5prime Sequence

856 bp (776 high quality bases) assembled on 2005-12-03

> BO06457.5prime
GAAGTTATCAGTCGACATGAGCAGCATGGATGTGAAGGAATTGGAAGTAA
ACAAAACCCTGCCCTATGATCCCTCCCTGCTTAAGGTAAACATCTCGCTG
CGGCAGGTCGAGGAGATCGCTTTGACGGTGTCCCAGCGATGCCATGTCAC
CGGAGCCAACGAAATCGCCTGGGCGCTGAGGGCTCTGATGCTGACAGATC
TTACCACCTTGGCGGGCGATGATACGGCTGCCAATGTGCGGAGACTATGC
CTACGCGCCTGCTATCCCTTCGAGCCGCAGTTCTTTGACAAGTTCTTCGA
CCGGGCTCTCATCCCAGAGATGCACACGGCCGCCGTTTGCGTTTATCCCG
CCAGGGTAAAGGACGCCTATTTAGCTATCCAACAGTACGACAAACTGGAT
AAGGTGGCTATTGCAGCGGTGGCCACGGGATTTCCCACGGGCCAGTACGG
CCTGCAGACCCGCCTGCAGGAGATCAGCCACGCCATTCTTGCTGGAGCCA
CAGAGATCGACATTGTGATCAATCGCCAGTTGGCCCTCGTTGGCGACTGG
GAGGCCATGTACAACGAGGTGGTCCTTATGCGCAGTGCCTGTGGACAAAG
GGCTCACCTAAAAACAATTCTGGCCATCGGGGAGCTGGGCACCATGGATA
ATGTTTACAAAGCAGCCATGGTTTGCATGATGGCCGGAGCGGATTTTATC
AAGACCTCAACGGGAAAGGAGACAGTCAACGCCACCCTGCCCGTTGGCCT
GGTCATGATATTTGCCATTCAGGAATTCAAACGACGCACGTGCCAGATTG
TGGGCCTTAAGCCAGCCGGAGGAGTAAAGACTGTACGAGATGCGATCGCC
TGGATG

BO06457.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-PA 1044 CG8525-RA 1..840 17..856 4200 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:12:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1269 CG8525-RD 120..959 17..856 4200 100 Plus
CG8525-RA 1378 CG8525-RA 229..1068 17..856 4200 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:12:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12425815..12426401 68..654 2935 100 Plus
2R 25286936 2R 12426462..12426665 653..856 1020 100 Plus
2R 25286936 2R 12425711..12425762 17..68 260 100 Plus
Blast to na_te.dros performed on 2015-02-13 06:12:57 has no hits.

BO06457.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:09 Download gff for BO06457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 1..840 17..856 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:03 Download gff for BO06457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-PA 1..840 17..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:00:22 Download gff for BO06457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 224..1068 9..856 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:16:18 Download gff for BO06457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 224..1068 9..856 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:16:18 Download gff for BO06457.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12425706..12425762 9..68 95 -> Plus
2R 12425816..12426399 69..652 100 -> Plus
2R 12426462..12426665 653..856 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:00:22 Download gff for BO06457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8313967..8314170 653..856 100   Plus
arm_2R 8313211..8313267 9..68 95 -> Plus
arm_2R 8313321..8313904 69..652 100 -> Plus

BO06457.complete Sequence

1075 bp (1075 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630407

> BO06457.complete
GAAGTTATCAGTCGACATGAGCAGCATGGATGTGAAGGAATTGGAAGTAA
ACAAAACCCTGCCCTATGATCCCTCCCTGCTTAAGGTAAACATCTCGCTG
CGGCAGGTCGAGGAGATCGCTTTGACGGTGTCCCAGCGATGCCATGTCAC
CGGAGCCAACGAAATCGCCTGGGCGCTGAGGGCTCTGATGCTGACAGATC
TTACCACCTTGGCGGGCGATGATACGGCTGCCAATGTGCGGAGACTATGC
CTACGCGCCTGCTATCCCTTCGAGCCGCAGTTCTTTGACAAGTTCTTCGA
CCGGGCTCTCATCCCAGAGATGCACACGGCCGCCGTTTGCGTTTATCCCG
CCAGGGTAAAGGACGCCTATTTAGCTATCCAACAGTACGACAAACTGGAT
AAGGTGGCTATTGCAGCGGTGGCCACGGGATTTCCCACGGGCCAGTACGG
CCTGCAGACCCGCCTGCAGGAGATCAGCCACGCCATTCTTGCTGGAGCCA
CAGAGATCGACATTGTGATCAATCGCCAGTTGGCCCTCGTTGGCGACTGG
GAGGCCATGTACAACGAGGTGGTCCTTATGCGCAGTGCCTGTGGACAAAG
GGCTCACCTAAAAACAATTCTGGCCATCGGGGAGCTGGGCACCATGGATA
ATGTTTACAAAGCAGCCATGGTTTGCATGATGGCCGGAGCGGATTTTATC
AAGACCTCAACGGGAAAGGAGACAGTCAACGCCACCCTGCCCGTTGGCCT
GGTCATGATATTTGCCATTCAGGAATTCAAACGACGCACGTGCCAGATTG
TGGGCCTTAAGCCAGCCGGAGGAGTAAAGACTGTACGAGATGCGATCGCC
TGGATGACGTTGGTCAACGAAACTCTTGGCATCCGCTGGTTGCGTCCCGA
GAGGTTCCGTTTCGGAGCCTCCGGATTGCTGGACGACATTGAACGCGTTG
TGCGTCAGGGTGTCAAAAAACTCGAGGAGGATGAGGCTCAGAAAAATGTG
CCCGTGTCTCGCGAGGCTGCTGCTGCCGAGACCTTCTGCAAGGAGCTGCG
GAAGAAGGCAAGCTTTCTAGACCAT

BO06457.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:07:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1044 CG8525-PD 1..1041 17..1057 5205 100 Plus
CG8525-RA 1044 CG8525-PA 1..1041 17..1057 5205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:07:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-RD 1269 CG8525-RD 120..1160 17..1057 5205 100 Plus
CG8525-RA 1378 CG8525-RA 229..1269 17..1057 5205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12425815..12426401 68..654 2935 100 Plus
2R 25286936 2R 12426462..12426866 653..1057 2025 100 Plus
2R 25286936 2R 12425711..12425762 17..68 260 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:07:44 has no hits.

BO06457.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:40 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 1..1044 17..1058 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:39 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 249..1294 9..1057 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:18:19 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 229..1269 17..1059 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:40 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 249..1294 9..1057 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:26:46 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
CG8525-RA 229..1269 17..1059 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:26:46 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12425711..12425762 17..68 100 -> Plus
2R 12425816..12426399 69..652 100 -> Plus
2R 12426462..12426866 653..1059 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:18:19 Download gff for BO06457.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8313216..8313267 17..68 100 -> Plus
arm_2R 8313321..8313904 69..652 100 -> Plus
arm_2R 8313967..8314371 653..1059 99   Plus

BO06457.pep Sequence

Translation from 16 to 1075

> BO06457.pep
MSSMDVKELEVNKTLPYDPSLLKVNISLRQVEEIALTVSQRCHVTGANEI
AWALRALMLTDLTTLAGDDTAANVRRLCLRACYPFEPQFFDKFFDRALIP
EMHTAAVCVYPARVKDAYLAIQQYDKLDKVAIAAVATGFPTGQYGLQTRL
QEISHAILAGATEIDIVINRQLALVGDWEAMYNEVVLMRSACGQRAHLKT
ILAIGELGTMDNVYKAAMVCMMAGADFIKTSTGKETVNATLPVGLVMIFA
IQEFKRRTCQIVGLKPAGGVKTVRDAIAWMTLVNETLGIRWLRPERFRFG
ASGLLDDIERVVRQGVKKLEEDEAQKNVPVSREAAAAETFCKELRKKASF
LDH

BO06457.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG8525-PD 347 CG8525-PD 1..347 1..347 1764 100 Plus
CG8525-PA 347 CG8525-PA 1..347 1..347 1764 100 Plus