Clone Sequence Records
BO06463.3prime Sequence
880 bp (804 high quality bases) assembled on 2005-12-03
> BO06463.3prime
ATGGTCTAGAAAGCTTGCGCGATTATTGCGCTGCGCTTGCCCTTGGGTGC
GGAACACGGCAATGGAATTGCTCTCCACCACAATCGTTTTGGTTAGGACG
TCGTAGGCGGTGCGATTGTTCTTGAAGAAGACCATCAACACGCAAATGGG
GAAGAGCAGGGTCATCCCCAGGTTCTTGATCAGCGCGCGGGCGAAGGAGC
GCATCAGCGAGGGAGTCTGTGGCGGATAAAGCAGAGCCCTCATCGGCTCC
CTCTGCGGCTGGAGGACGAACTGTGGAAGGGGCGGCCCCTGAAGCGGCAT
CACTGCTTCCACATAGTATATGCGTATCTTCATCAGCGACTTGCCCGGCG
TAGCCCCTTGGTATAGGTATGTCCACAGCGCTTCGTAGCAGCAAACGATG
AACTTGGTCAGCATTTCGATTAGCAGGAGGTCGGTGGACATCGAAATAAA
ATCTAGTGATGTGTCAAAGAAGTTCGAAAAGAGGTCTTCTTGGTCCAGGG
TGCGCCGAATCACGTCCTCATCGAACTCTATGTTGAACAGGTTGACCACC
CCGAAGGTAATGATGATTTTCACAATGAAAAGGATGAACATATCGATGGT
CTCCGCCACGGCGCGCTTCCAAAAAGGTGACAGAACGTACTCGTAGCCGC
CAAGACGCTGTATGATATCCAGCTGGGCCGCCTCGCCCAATATCCGCAGG
CCGCTGAAGTTTGGCGCAGGCAAACGAGGCTCTGCAGCTGGTTCTCCCGG
CGCAGCAGCCGAGCCCTGAACCAGTGCTTGGGGTTGTCCCATGGCGGCTG
CTTGGAGAGCAGCGGAAGAAGGCAGTCCCGGGAACATGGTCGGGTAGTTG
GCCATCAGGTAGTAGGGAAACATGAGCATC
BO06463.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-PA | 978 | CG8237-RA | 114..975 | 880..19 | 4310 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-RA | 1220 | CG8237-RA | 205..1066 | 880..19 | 4310 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:11:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8925875..8926736 | 880..19 | 4310 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 12:11:40 has no hits.
BO06463.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:18 Download gff for
BO06463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-PA | 114..978 | 16..880 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:15 Download gff for
BO06463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-PA | 114..978 | 16..880 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:59:10 Download gff for
BO06463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 205..1066 | 19..880 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:28:05 Download gff for
BO06463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 205..1066 | 19..880 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:28:05 Download gff for
BO06463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8925875..8926736 | 19..880 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:59:10 Download gff for
BO06463.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4813380..4814241 | 19..880 | 100 | | Minus |
BO06463.5prime Sequence
829 bp (828 high quality bases) assembled on 2005-12-03
> BO06463.5prime
GAAGTTATCAGTCGACATGGGTGAACAAGGCGAGGAGACGGGTCAGAAGC
TTACGGAGCGCTCCACCAAGGAAGCCTACTTCGAAAGCCTCGCCGAGTGG
GCCAAACAGGCGACGCTGGCCCAGAATGCGATGCTCATGTTTCCCTACTA
CCTGATGGCCAACTACCCGACCATGTTCCCGGGACTGCCTTCTTCCGCTG
CTCTCCAAGCAGCCGCCATGGGACAACCCCAAGCACTGGTTCAGGGCTCG
GCTGCTGCGCCGGGAGAACCAGCTGCAGAGCCTCGTTTGCCTGCGCCAAA
CTTCAGCGGCCTGCGGATATTGGGCGAGGCGGCCCAGCTGGATATCATAC
AGCGTCTTGGCGGCTACGAGTACGTTCTGTCACCTTTTTGGAAGCGCGCC
GTGGCGGAGACCATCGATATGTTCATCCTTTTCATTGTGAAAATCATCAT
TACCTTCGGGGTGGTCAACCTGTTCAACATAGAGTTCGATGAGGACGTGA
TTCGGCGCACCCTGGACCAAGAAGACCTCTTTTCGAACTTCTTTGACACA
TCACTAGATTTTATTTCGATGTCCACCGACCTCCTGCTAATCGAAATGCT
GACCAAGTTCATCGTTTGCTGCTACGAAGCGCTGTGGACATACCTATACC
AAGGGGCTACGCCGGGCAAGTCGCTGATGAAGATACGCATATACTATGTG
GAAGCAGTGATGCCGCTTCAGGGGCCGCCCCTTCCACAGTTCGTCCTCCA
GCCGCAGAGGGAGCCGATGAGGGCTCTGCTTTATCCGCCACAGACTCCCT
CGCTGATGCGCTCCTTCGCCCGCGCGCTG
BO06463.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-PA | 978 | CG8237-RA | 1..813 | 17..829 | 4065 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:57:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-RA | 1220 | CG8237-RA | 92..904 | 17..829 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:57:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8925762..8926574 | 17..829 | 4065 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 19:57:40 has no hits.
BO06463.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:19 Download gff for
BO06463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-PA | 1..813 | 17..829 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:16 Download gff for
BO06463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-PA | 1..813 | 17..829 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:21:59 Download gff for
BO06463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 87..904 | 10..829 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:45:41 Download gff for
BO06463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 87..904 | 10..829 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:45:41 Download gff for
BO06463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8925757..8926574 | 10..829 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:21:59 Download gff for
BO06463.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4813262..4814079 | 10..829 | 99 | | Plus |
BO06463.complete Sequence
1009 bp (1009 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630410
> BO06463.complete
GAAGTTATCAGTCGACATGGGTGAACAAGGCGAGGAGACGGGTCAGAAGC
TTACGGAGCGCTCCACCAAGGAAGCCTACTTCGAAAGCCTCGCCGAGTGG
GCCAAACAGGCGACGCTGGCCCAGAATGCGATGCTCATGTTTCCCTACTA
CCTGATGGCCAACTACCCGACCATGTTCCCGGGACTGCCTTCTTCCGCTG
CTCTCCAAGCAGCCGCCATGGGACAACCCCAAGCACTGGTTCAGGGCTCG
GCTGCTGCGCCGGGAGAACCAGCTGCAGAGCCTCGTTTGCCTGCGCCAAA
CTTCAGCGGCCTGCGGATATTGGGCGAGGCGGCCCAGCTGGATATCATAC
AGCGTCTTGGCGGCTACGAGTACGTTCTGTCACCTTTTTGGAAGCGCGCC
GTGGCGGAGACCATCGATATGTTCATCCTTTTCATTGTGAAAATCATCAT
TACCTTCGGGGTGGTCAACCTGTTCAACATAGAGTTCGATGAGGACGTGA
TTCGGCGCACCCTGGACCAAGAAGACCTCTTTTCGAACTTCTTTGACACA
TCACTAGATTTTATTTCGATGTCCACCGACCTCCTGCTAATCGAAATGCT
GACCAAGTTCATCGTTTGCTGCTACGAAGCGCTGTGGACATACCTATACC
AAGGGGCTACGCCGGGCAAGTCGCTGATGAAGATACGCATATACTATGTG
GAAGCAGTGATGCCGCTTCAGGGGCCGCCCCTTCCACAGTTCGTCCTCCA
GCCGCAGAGGGAGCCGATGAGGGCTCTGCTTTATCCGCCACAGACTCCCT
CGCTGATGCGCTCCTTCGCCCGCGCGCTGATCAAGAACCTGGGGATGACC
CTGCTCTTCCCCATTTGCGTGTTGATGGTCTTCTTCAAGAACAATCGCAC
CGCCTACGACGTCCTAACCAAAACGATTGTGGTGGAGAGCAATTCCATTG
CCGTGTTCCGCACCCAAGGGCAAGCGCAGCGCAATAATCGCGCAAGCTTT
CTAGACCAT
BO06463.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:30:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-RA | 978 | CG8237-PA | 1..975 | 17..991 | 4875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:30:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-RA | 1220 | CG8237-RA | 92..1066 | 17..991 | 4875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:30:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8925762..8926736 | 17..991 | 4875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:30:07 has no hits.
BO06463.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:21 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 1..978 | 17..994 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:15 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 69..1048 | 10..991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:38 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 92..1066 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:22 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 69..1048 | 10..991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:59 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8237-RA | 92..1066 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:59 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8925762..8926736 | 17..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:38 Download gff for
BO06463.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4813267..4814241 | 17..993 | 99 | | Plus |
BO06463.pep Sequence
Translation from 16 to 1009
> BO06463.pep
MGEQGEETGQKLTERSTKEAYFESLAEWAKQATLAQNAMLMFPYYLMANY
PTMFPGLPSSAALQAAAMGQPQALVQGSAAAPGEPAAEPRLPAPNFSGLR
ILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDMFILFIVKIIITFGVV
NLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEMLTKFIV
CCYEALWTYLYQGATPGKSLMKIRIYYVEAVMPLQGPPLPQFVLQPQREP
MRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLMVFFKNNRTAYDVL
TKTIVVESNSIAVFRTQGQAQRNNRASFLDH
BO06463.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:45:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8237-PA | 325 | CG8237-PA | 1..325 | 1..325 | 1662 | 100 | Plus |