Clone BO06463 Report

Search the DGRC for BO06463

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:64
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG8237-RA
Protein status:BO06463.pep: validated full length
Sequenced Size:1009

Clone Sequence Records

BO06463.3prime Sequence

880 bp (804 high quality bases) assembled on 2005-12-03

> BO06463.3prime
ATGGTCTAGAAAGCTTGCGCGATTATTGCGCTGCGCTTGCCCTTGGGTGC
GGAACACGGCAATGGAATTGCTCTCCACCACAATCGTTTTGGTTAGGACG
TCGTAGGCGGTGCGATTGTTCTTGAAGAAGACCATCAACACGCAAATGGG
GAAGAGCAGGGTCATCCCCAGGTTCTTGATCAGCGCGCGGGCGAAGGAGC
GCATCAGCGAGGGAGTCTGTGGCGGATAAAGCAGAGCCCTCATCGGCTCC
CTCTGCGGCTGGAGGACGAACTGTGGAAGGGGCGGCCCCTGAAGCGGCAT
CACTGCTTCCACATAGTATATGCGTATCTTCATCAGCGACTTGCCCGGCG
TAGCCCCTTGGTATAGGTATGTCCACAGCGCTTCGTAGCAGCAAACGATG
AACTTGGTCAGCATTTCGATTAGCAGGAGGTCGGTGGACATCGAAATAAA
ATCTAGTGATGTGTCAAAGAAGTTCGAAAAGAGGTCTTCTTGGTCCAGGG
TGCGCCGAATCACGTCCTCATCGAACTCTATGTTGAACAGGTTGACCACC
CCGAAGGTAATGATGATTTTCACAATGAAAAGGATGAACATATCGATGGT
CTCCGCCACGGCGCGCTTCCAAAAAGGTGACAGAACGTACTCGTAGCCGC
CAAGACGCTGTATGATATCCAGCTGGGCCGCCTCGCCCAATATCCGCAGG
CCGCTGAAGTTTGGCGCAGGCAAACGAGGCTCTGCAGCTGGTTCTCCCGG
CGCAGCAGCCGAGCCCTGAACCAGTGCTTGGGGTTGTCCCATGGCGGCTG
CTTGGAGAGCAGCGGAAGAAGGCAGTCCCGGGAACATGGTCGGGTAGTTG
GCCATCAGGTAGTAGGGAAACATGAGCATC

BO06463.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-PA 978 CG8237-RA 114..975 880..19 4310 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-RA 1220 CG8237-RA 205..1066 880..19 4310 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8925875..8926736 880..19 4310 100 Minus
Blast to na_te.dros performed on 2015-02-13 12:11:40 has no hits.

BO06463.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:18 Download gff for BO06463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-PA 114..978 16..880 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:15 Download gff for BO06463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-PA 114..978 16..880 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 17:59:10 Download gff for BO06463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 205..1066 19..880 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:28:05 Download gff for BO06463.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 205..1066 19..880 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:28:05 Download gff for BO06463.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 8925875..8926736 19..880 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 17:59:10 Download gff for BO06463.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4813380..4814241 19..880 100   Minus

BO06463.5prime Sequence

829 bp (828 high quality bases) assembled on 2005-12-03

> BO06463.5prime
GAAGTTATCAGTCGACATGGGTGAACAAGGCGAGGAGACGGGTCAGAAGC
TTACGGAGCGCTCCACCAAGGAAGCCTACTTCGAAAGCCTCGCCGAGTGG
GCCAAACAGGCGACGCTGGCCCAGAATGCGATGCTCATGTTTCCCTACTA
CCTGATGGCCAACTACCCGACCATGTTCCCGGGACTGCCTTCTTCCGCTG
CTCTCCAAGCAGCCGCCATGGGACAACCCCAAGCACTGGTTCAGGGCTCG
GCTGCTGCGCCGGGAGAACCAGCTGCAGAGCCTCGTTTGCCTGCGCCAAA
CTTCAGCGGCCTGCGGATATTGGGCGAGGCGGCCCAGCTGGATATCATAC
AGCGTCTTGGCGGCTACGAGTACGTTCTGTCACCTTTTTGGAAGCGCGCC
GTGGCGGAGACCATCGATATGTTCATCCTTTTCATTGTGAAAATCATCAT
TACCTTCGGGGTGGTCAACCTGTTCAACATAGAGTTCGATGAGGACGTGA
TTCGGCGCACCCTGGACCAAGAAGACCTCTTTTCGAACTTCTTTGACACA
TCACTAGATTTTATTTCGATGTCCACCGACCTCCTGCTAATCGAAATGCT
GACCAAGTTCATCGTTTGCTGCTACGAAGCGCTGTGGACATACCTATACC
AAGGGGCTACGCCGGGCAAGTCGCTGATGAAGATACGCATATACTATGTG
GAAGCAGTGATGCCGCTTCAGGGGCCGCCCCTTCCACAGTTCGTCCTCCA
GCCGCAGAGGGAGCCGATGAGGGCTCTGCTTTATCCGCCACAGACTCCCT
CGCTGATGCGCTCCTTCGCCCGCGCGCTG

BO06463.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-PA 978 CG8237-RA 1..813 17..829 4065 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-RA 1220 CG8237-RA 92..904 17..829 4065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8925762..8926574 17..829 4065 100 Plus
Blast to na_te.dros performed on 2015-02-04 19:57:40 has no hits.

BO06463.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:19 Download gff for BO06463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-PA 1..813 17..829 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:16 Download gff for BO06463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-PA 1..813 17..829 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:21:59 Download gff for BO06463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 87..904 10..829 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:45:41 Download gff for BO06463.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 87..904 10..829 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:45:41 Download gff for BO06463.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8925757..8926574 10..829 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:21:59 Download gff for BO06463.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4813262..4814079 10..829 99   Plus

BO06463.complete Sequence

1009 bp (1009 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630410

> BO06463.complete
GAAGTTATCAGTCGACATGGGTGAACAAGGCGAGGAGACGGGTCAGAAGC
TTACGGAGCGCTCCACCAAGGAAGCCTACTTCGAAAGCCTCGCCGAGTGG
GCCAAACAGGCGACGCTGGCCCAGAATGCGATGCTCATGTTTCCCTACTA
CCTGATGGCCAACTACCCGACCATGTTCCCGGGACTGCCTTCTTCCGCTG
CTCTCCAAGCAGCCGCCATGGGACAACCCCAAGCACTGGTTCAGGGCTCG
GCTGCTGCGCCGGGAGAACCAGCTGCAGAGCCTCGTTTGCCTGCGCCAAA
CTTCAGCGGCCTGCGGATATTGGGCGAGGCGGCCCAGCTGGATATCATAC
AGCGTCTTGGCGGCTACGAGTACGTTCTGTCACCTTTTTGGAAGCGCGCC
GTGGCGGAGACCATCGATATGTTCATCCTTTTCATTGTGAAAATCATCAT
TACCTTCGGGGTGGTCAACCTGTTCAACATAGAGTTCGATGAGGACGTGA
TTCGGCGCACCCTGGACCAAGAAGACCTCTTTTCGAACTTCTTTGACACA
TCACTAGATTTTATTTCGATGTCCACCGACCTCCTGCTAATCGAAATGCT
GACCAAGTTCATCGTTTGCTGCTACGAAGCGCTGTGGACATACCTATACC
AAGGGGCTACGCCGGGCAAGTCGCTGATGAAGATACGCATATACTATGTG
GAAGCAGTGATGCCGCTTCAGGGGCCGCCCCTTCCACAGTTCGTCCTCCA
GCCGCAGAGGGAGCCGATGAGGGCTCTGCTTTATCCGCCACAGACTCCCT
CGCTGATGCGCTCCTTCGCCCGCGCGCTGATCAAGAACCTGGGGATGACC
CTGCTCTTCCCCATTTGCGTGTTGATGGTCTTCTTCAAGAACAATCGCAC
CGCCTACGACGTCCTAACCAAAACGATTGTGGTGGAGAGCAATTCCATTG
CCGTGTTCCGCACCCAAGGGCAAGCGCAGCGCAATAATCGCGCAAGCTTT
CTAGACCAT

BO06463.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-RA 978 CG8237-PA 1..975 17..991 4875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:30:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-RA 1220 CG8237-RA 92..1066 17..991 4875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:30:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8925762..8926736 17..991 4875 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:30:07 has no hits.

BO06463.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:21 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 1..978 17..994 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:15 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 69..1048 10..991 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:16:38 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 92..1066 17..993 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:22 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 69..1048 10..991 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:11:59 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
CG8237-RA 92..1066 17..993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:11:59 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8925762..8926736 17..993 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:16:38 Download gff for BO06463.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4813267..4814241 17..993 99   Plus

BO06463.pep Sequence

Translation from 16 to 1009

> BO06463.pep
MGEQGEETGQKLTERSTKEAYFESLAEWAKQATLAQNAMLMFPYYLMANY
PTMFPGLPSSAALQAAAMGQPQALVQGSAAAPGEPAAEPRLPAPNFSGLR
ILGEAAQLDIIQRLGGYEYVLSPFWKRAVAETIDMFILFIVKIIITFGVV
NLFNIEFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEMLTKFIV
CCYEALWTYLYQGATPGKSLMKIRIYYVEAVMPLQGPPLPQFVLQPQREP
MRALLYPPQTPSLMRSFARALIKNLGMTLLFPICVLMVFFKNNRTAYDVL
TKTIVVESNSIAVFRTQGQAQRNNRASFLDH

BO06463.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:45:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8237-PA 325 CG8237-PA 1..325 1..325 1662 100 Plus