Clone Sequence Records
BO06465.3prime Sequence
731 bp (730 high quality bases) assembled on 2005-12-03
> BO06465.3prime
ATGGTCTAGAAAGCTTGCGTGTATTCCGTCGACAATATTGCGAATGCGCC
GCGTCTTGGACTCGGCCAACGCGTCCTCCAGCGTTTTGATCATGTGCACC
AGACTGCAGACATCCGTCTGCACTAGCAAATCCTTTCGATGCAGCCGCTC
GTCCTCCTGCATGGCCTTCAGCTCCTGTTCGCTGCGCCCGGAGATGTCCA
CCGCCAGCAGCTCTCGGTTTTCATTCTTCGGTTCGGTGTGCAGATATAGC
TTCATAGTCACCACCACCTGACACTGATCCAGCAGGCTCCGCGACGCGGT
GCGCACCTCCAGTCGCCAGTCCAGGTTGACCAGCCGATAGGCACGTATGT
TGGCCGACTTGATTGAGCCCTCCACAAAGTTTCGTTTGCTGGTGACGAAC
TGCTCGAGAACTTCTATCACATCGTCGCCGAGTTCGGGGAATGTCTGGCG
CAGTATGGCCTCCATGTCGACGGAACTGCTCCCCACTCGGGTGGTCACGC
TGATGAGCAGGGATATCAGCGCCTCCACCGCCTGCTGCACTGCCTCAGGA
CTGCCCAAATCGGAGGACTTTTTGGCTAGCATCTCGTAACGGCTGGGATT
GGGTCCATTTATTAGGTAATCAAAGGCGGACTTGCACAGCTCCACCACAG
CGCTGGCGGGTTTTTGGAGCAGGCTCAAATGATTGCGCTGTTGTTGAGTT
AAGCGCAGAGATGACATGTCGACTGATAACT
BO06465.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-PA | 702 | CG7168-RA | 1..699 | 717..19 | 3495 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:10:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-RA | 1034 | CG7168-RA | 259..957 | 717..19 | 3495 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:10:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18224979..18225677 | 19..717 | 3495 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 01:10:27 has no hits.
BO06465.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:22 Download gff for
BO06465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-PA | 1..702 | 16..717 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:20 Download gff for
BO06465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-PA | 1..702 | 16..717 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:29:17 Download gff for
BO06465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 259..957 | 19..717 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:09:40 Download gff for
BO06465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 259..957 | 19..717 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:09:40 Download gff for
BO06465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18224979..18225677 | 19..717 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:29:17 Download gff for
BO06465.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14050701..14051399 | 19..717 | 100 | | Plus |
BO06465.5prime Sequence
731 bp (730 high quality bases) assembled on 2005-12-03
> BO06465.5prime
GAAGTTATCAGTCGACATGTCATCTCTGCGCTTAACTCAACAACAGCGCA
ATCATTTGAGCCTGCTCCAAAAACCCGCCAGCGCTGTGGTGGAGCTGTGC
AAGTCCGCCTTTGATTACCTAATAAATGGACCCAATCCCAGCCGTTACGA
GATGCTAGCCAAAAAGTCCTCCGATTTGGGCAGTCCTGAGGCAGTGCAGC
AGGCGGTGGAGGCGCTGATATCCCTGCTCATCAGCGTGACCACCCGAGTG
GGGAGCAGTTCCGTCGACATGGAGGCCATACTGCGCCAGACATTCCCCGA
ACTCGGCGACGATGTGATAGAAGTTCTCGAGCAGTTCGTCACCAGCAAAC
GAAACTTTGTGGAGGGCTCAATCAAGTCGGCCAACATACGTGCCTATCGG
CTGGTCAACCTGGACTGGCGACTGGAGGTGCGCACCGCGTCGCGGAGCCT
GCTGGATCAGTGTCAGGTGGTGGTGACTATGAAGCTATATCTGCACACCG
AACCGAAGAATGAAAACCGAGAGCTGCTGGCGGTGGACATCTCCGGGCGC
AGCGAACAGGAGCTGAAGGCCATGCAGGAGGACGAGCGGCTGCATCGAAA
GGATTTGCTAGTGCAGACGGATGTCTGCAGTCTGGTGCACATGATCAAAA
CGCTGGAGGACGCGTTGGCCGAGTCCAAGACGCGGCGCATTCGCAATATT
GTCGACGGAATACACGCAAGCTTTCTAGACC
BO06465.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-PA | 702 | CG7168-RA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:26:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-RA | 1034 | CG7168-RA | 259..957 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:26:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18224979..18225677 | 715..17 | 3495 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:26:22 has no hits.
BO06465.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:23 Download gff for
BO06465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-PA | 1..702 | 17..718 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:21 Download gff for
BO06465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-PA | 1..702 | 17..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:39:27 Download gff for
BO06465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 259..957 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:40:45 Download gff for
BO06465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 259..957 | 17..715 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:40:45 Download gff for
BO06465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18224979..18225677 | 17..715 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:39:27 Download gff for
BO06465.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14050701..14051399 | 17..715 | 100 | | Minus |
BO06465.complete Sequence
733 bp (733 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630411
> BO06465.complete
GAAGTTATCAGTCGACATGTCATCTCTGCGCTTAACTCAACAACAGCGCA
ATCATTTGAGCCTGCTCCAAAAACCCGCCAGCGCTGTGGTGGAGCTGTGC
AAGTCCGCCTTTGATTACCTAATAAATGGACCCAATCCCAGCCGTTACGA
GATGCTAGCCAAAAAGTCCTCCGATTTGGGCAGTCCTGAGGCAGTGCAGC
AGGCGGTGGAGGCGCTGATATCCCTGCTCATCAGCGTGACCACCCGAGTG
GGGAGCAGTTCCGTCGACATGGAGGCCATACTGCGCCAGACATTCCCCGA
ACTCGGCGACGATGTGATAGAAGTTCTCGAGCAGTTCGTCACCAGCAAAC
GAAACTTTGTGGAGGGCTCAATCAAGTCGGCCAACATACGTGCCTATCGG
CTGGTCAACCTGGACTGGCGACTGGAGGTGCGCACCGCGTCGCGGAGCCT
GCTGGATCAGTGTCAGGTGGTGGTGACTATGAAGCTATATCTGCACACCG
AACCGAAGAATGAAAACCGAGAGCTGCTGGCGGTGGACATCTCCGGGCGC
AGCGAACAGGAGCTGAAGGCCATGCAGGAGGACGAGCGGCTGCATCGAAA
GGATTTGCTAGTGCAGACGGATGTCTGCAGTCTGGTGCACATGATCAAAA
CGCTGGAGGACGCGTTGGCCGAGTCCAAGACGCGGCGCATTCGCAATATT
GTCGACGGAATACACGCAAGCTTTCTAGACCAT
BO06465.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:32:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-RA | 702 | CG7168-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:32:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-RA | 1034 | CG7168-RA | 259..957 | 17..715 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:32:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18224979..18225677 | 715..17 | 3495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 23:32:45 has no hits.
BO06465.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:23 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 1..702 | 17..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:17 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 204..902 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:31:18 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 259..957 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:23 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 204..902 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:53 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7168-RA | 259..957 | 17..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:02:53 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18224976..18225677 | 17..717 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:31:18 Download gff for
BO06465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14050698..14051399 | 17..717 | 99 | | Minus |
BO06465.pep Sequence
Translation from 16 to 733
> BO06465.pep
MSSLRLTQQQRNHLSLLQKPASAVVELCKSAFDYLINGPNPSRYEMLAKK
SSDLGSPEAVQQAVEALISLLISVTTRVGSSSVDMEAILRQTFPELGDDV
IEVLEQFVTSKRNFVEGSIKSANIRAYRLVNLDWRLEVRTASRSLLDQCQ
VVVTMKLYLHTEPKNENRELLAVDISGRSEQELKAMQEDERLHRKDLLVQ
TDVCSLVHMIKTLEDALAESKTRRIRNIVDGIHASFLDH
BO06465.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:45:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7168-PA | 233 | CG7168-PA | 1..233 | 1..233 | 1149 | 100 | Plus |