Clone Sequence Records
BO06476.3prime Sequence
569 bp (568 high quality bases) assembled on 2005-12-03
> BO06476.3prime
ATGGTCTAGAAAGCTTGCTTTGTTCTTGATGCGCTGCACGATCCACTCTA
ATCCTTGATAGAGTCCTTCGCCGGTGAGCGCACAGCAGGCCTGGATGTGC
CATTGGTGCTTCTTGATGGAGGTGAGGTCCAGTTGTCGTGAGATTTCCGC
CGCCGACATAGAGCCCTTGAGATCCTGCTTATTGGCATAGACCAGCAAAC
TGGCCTTGCTCAGATCCTCATGTTGCAGCATCCGGTAGAGCTCTTCCCGC
GTAACAGCTAACCGTTCCCGGTCCGTGGAGTCGATGACCATGATCACCAG
CTCTGTGTTCGTGTAGTAGGTGCTCCAAGCGGCGCGCAGACTCTGCTGAC
CACCAAGATCCCAGACAAGAAAGTGTATATTCCGCCAGACGACCTCCTCC
ACGTTGGAACCGATCGTGGGACTTGTGTGGACCACTTCGTTCATCAGGAA
CTGGTACAGGATGGTGGTTTTGCCCGCGTTGTCCAGACCCACCATCACCA
GCTTGTGCTCCTCGTTGCCAAACATCCGCCAGAGCCGCGATAATAACAGT
CCCATGTCGACTGATAACT
BO06476.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-PA | 540 | CG7197-RA | 1..537 | 555..19 | 2685 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 16:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-RA | 1339 | CG7197-RA | 550..1086 | 555..19 | 2685 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 16:26:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8298754..8299290 | 19..555 | 2685 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 16:26:41 has no hits.
BO06476.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:43 Download gff for
BO06476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-PA | 1..540 | 16..555 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:49 Download gff for
BO06476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-PA | 1..540 | 16..555 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:13:16 Download gff for
BO06476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 19..555 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:28:34 Download gff for
BO06476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 19..555 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:28:34 Download gff for
BO06476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8298754..8299290 | 19..555 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:13:16 Download gff for
BO06476.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8291854..8292390 | 19..555 | 100 | | Plus |
BO06476.5prime Sequence
569 bp (568 high quality bases) assembled on 2005-12-03
> BO06476.5prime
GAAGTTATCAGTCGACATGGGACTGTTATTATCGCGGCTCTGGCGGATGT
TTGGCAACGAGGAGCACAAGCTGGTGATGGTGGGTCTGGACAACGCGGGC
AAAACCACCATCCTGTACCAGTTCCTGATGAACGAAGTGGTCCACACAAG
TCCCACGATCGGTTCCAACGTGGAGGAGGTCGTCTGGCGGAATATACACT
TTCTTGTCTGGGATCTTGGTGGTCAGCAGAGTCTGCGCGCCGCTTGGAGC
ACCTACTACACGAACACAGAGCTGGTGATCATGGTCATCGACTCCACGGA
CCGGGAACGGTTAGCTGTTACGCGGGAAGAGCTCTACCGGATGCTGCAAC
ATGAGGATCTGAGCAAGGCCAGTTTGCTGGTCTATGCCAATAAGCAGGAT
CTCAAGGGCTCTATGTCGGCGGCGGAAATCTCACGACAACTGGACCTCAC
CTCCATCAAGAAGCACCAATGGCACATCCAGGCCTGCTGTGCGCTCACCG
GCGAAGGACTCTATCAAGGATTAGAGTGGATCGTGCAGCGCATCAAGAAC
AAAGCAAGCTTTCTAGACC
BO06476.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-PA | 540 | CG7197-RA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 06:13:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-RA | 1339 | CG7197-RA | 550..1086 | 17..553 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 06:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8298754..8299290 | 553..17 | 2685 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 06:13:04 has no hits.
BO06476.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:44 Download gff for
BO06476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-PA | 1..540 | 17..556 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:50 Download gff for
BO06476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-PA | 1..540 | 17..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:00:23 Download gff for
BO06476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 08:16:32 Download gff for
BO06476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 17..553 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 08:16:32 Download gff for
BO06476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8298754..8299290 | 17..553 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:00:23 Download gff for
BO06476.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8291854..8292390 | 17..553 | 100 | | Minus |
BO06476.complete Sequence
571 bp (571 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630415
> BO06476.complete
GAAGTTATCAGTCGACATGGGACTGTTATTATCGCGGCTCTGGCGGATGT
TTGGCAACGAGGAGCACAAGCTGGTGATGGTGGGTCTGGACAACGCGGGC
AAAACCACCATCCTGTACCAGTTCCTGATGAACGAAGTGGTCCACACAAG
TCCCACGATCGGTTCCAACGTGGAGGAGGTCGTCTGGCGGAATATACACT
TTCTTGTCTGGGATCTTGGTGGTCAGCAGAGTCTGCGCGCCGCTTGGAGC
ACCTACTACACGAACACAGAGCTGGTGATCATGGTCATCGACTCCACGGA
CCGGGAACGGTTAGCTGTTACGCGGGAAGAGCTCTACCGGATGCTGCAAC
ATGAGGATCTGAGCAAGGCCAGTTTGCTGGTCTATGCCAATAAGCAGGAT
CTCAAGGGCTCTATGTCGGCGGCGGAAATCTCACGACAACTGGACCTCAC
CTCCATCAAGAAGCACCAATGGCACATCCAGGCCTGCTGTGCGCTCACCG
GCGAAGGACTCTATCAAGGATTAGAGTGGATCGTGCAGCGCATCAAGAAC
AAAGCAAGCTTTCTAGACCAT
BO06476.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:15:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-RA | 540 | CG7197-PA | 1..537 | 17..553 | 2685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:15:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-RA | 1339 | CG7197-RA | 550..1086 | 17..553 | 2685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:15:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8298754..8299290 | 553..17 | 2685 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:15:20 has no hits.
BO06476.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:28 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 1..540 | 17..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:23 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 508..1044 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:20 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 17..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:23:28 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 508..1044 | 17..553 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:28 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7197-RA | 550..1086 | 17..555 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:14:28 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8298750..8299290 | 17..555 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:20 Download gff for
BO06476.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8291850..8292390 | 17..555 | 99 | | Minus |
BO06476.pep Sequence
Translation from 16 to 571
> BO06476.pep
MGLLLSRLWRMFGNEEHKLVMVGLDNAGKTTILYQFLMNEVVHTSPTIGS
NVEEVVWRNIHFLVWDLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLA
VTREELYRMLQHEDLSKASLLVYANKQDLKGSMSAAEISRQLDLTSIKKH
QWHIQACCALTGEGLYQGLEWIVQRIKNKASFLDH
BO06476.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7197-PA | 179 | CG7197-PA | 1..179 | 1..179 | 931 | 100 | Plus |
| Arf79F-PJ | 182 | CG8385-PJ | 1..179 | 1..178 | 493 | 51.4 | Plus |
| Arf79F-PI | 182 | CG8385-PI | 1..179 | 1..178 | 493 | 51.4 | Plus |
| Arf79F-PH | 182 | CG8385-PH | 1..179 | 1..178 | 493 | 51.4 | Plus |
| Arf79F-PF | 182 | CG8385-PF | 1..179 | 1..178 | 493 | 51.4 | Plus |
