Clone Sequence Records
BO06477.3prime Sequence
824 bp (773 high quality bases) assembled on 2005-12-03
> BO06477.3prime
ATGGTCTAGAAAGCTTGCGTTTTTGTTCGAGCCCTTCTTGACGGCCAAGA
GCTCCAGTCGCGTAATAGCATCGTCCAGAAACCTGCGCTGCTCCTGCAGC
TGCGGTAGGAGCTCCTCAGCACTAAGTGGGTGAGTGGGCTTAGGTGTTGC
CAAGCCCGTTGCAGCTGATTTTGCGGATTCAGTCCAACGACTCCGCAGAC
CTGATACTCCTATGGATGGCCTAAGCATGTCCAGCACTCTTTTAATGATA
GAGGGACTGGAATCCTGCTGCGGATCCGGGGAATGATCCTGCTGGTGGTG
GTTATGTTGCTGGTCGCTGGCCACACTGCCCTGTGGAAACTCTGGCATGG
TCAGCAAGGGTCCCCACAAAAAGGAACCTAATCCGGGGCCAGCCGGCGAT
GCGCCTTCCGACGAGTGTCCTTCCAGTTGCTTCCCTTGGGAGGCAAAGCG
TCCGTCGAGCAGCTCAAGTTGTCGTTTCAAATCATCCAATTTATGCTGCA
GGTGTTCAAAGTCAGCCGTTAGATTGATGGCCAGCCTCTGCGTGGTCTCG
CCCTTGGAGATTTCCTCGAGCTTTTCTATCTGAACGCCTATTTGATGATC
TCTTAGCTGTAGATCTTCCAGCAGAAGTTGAGTTTCCGCTCGAAGCGGCT
GCTCTAAAAAAAGACGTGCGATCTCCGCCTGCAATAGCTGTTTGTGGGTG
CGCAGCGCACTTAGCTCCAGTTCCTGAGGATTCCCAAGATTCGAACGGAC
CAGAACTGATCCCAGGATCATAAGCAAACACACAAAGACTTCTGAACGCG
AGCGAAGCATGTCGACTGATAACT
BO06477.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-PA | 795 | CG4194-RA | 1..792 | 810..19 | 3960 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:10:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 1097 | CG4194-RA | 16..807 | 810..19 | 3960 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:10:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2068607..2069398 | 810..19 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:10:05 has no hits.
BO06477.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:45 Download gff for
BO06477.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 15..810 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:51 Download gff for
BO06477.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 15..810 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:53:06 Download gff for
BO06477.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..810 | 15..821 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:29:45 Download gff for
BO06477.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..810 | 15..821 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:29:45 Download gff for
BO06477.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2068593..2069401 | 15..821 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:53:06 Download gff for
BO06477.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1962626..1963434 | 15..821 | 99 | | Minus |
BO06477.5prime Sequence
824 bp (741 high quality bases) assembled on 2005-12-03
> BO06477.5prime
GAAGTTATCAGTCGACATGCTTCGCTCGCGTTCAGAAGTCTTTGTGTGTT
TGCTTATGATCCTGGGATCAGTTCTGGTCCGTTCGAATCTTGGGAATCCT
CAGGAACTGGAGCTAAGTGCGCTGCGCACCCACAAACAGCTATTGCAGGC
GGAGATCGCACGTCTTTTTTTAGAGCAGCCGCTTCGAGCGGAAACTCAAC
TTCTGCTGGAAGATCTACAGCTAAGAGATCATCAAATAGGCGTTCAGATA
GAAAAGCTCGAGGAAATCTCCAAGGGCGAGACCACGCAGAGGCTGGCCAT
CAATCTAACGGCTGACTTTGAACACCTGCAGCATAAATTGGATGATTTGA
AACGACAACTTGAGCTGCTCGACGGACGCTTTGCCTCCCAAGGGAAGCAA
CTGGAAGGACACTCGTCGGAAGGCGCATCGCCGGCTGGCCCCGGATTAGG
TTCCTTTTTGTGGGGACCCTTGCTGACCATGCCAGAGTTTCCACAGGGCA
GTGTGGCCAGCGACCAGCAACATAACCACCACCAGCAGGATCATTCCCCG
GATCCGCAGCAGGATTCCAGTCCCTCTATCATTAAAAGAGTGCTGGACAT
GCTTAGGCCATCCATAGGAGTATCAGGTCTGCGGAGTCGTTGGACTGAAT
CCGCAAAATCAGCTGCAACGGGCTTGGCAACACCTAAGCCCACTCACCCA
CTTAGTGCTGAGGAGCTCCTACCGCAGCTGCAGGAGCAGCGCAGGTTTCT
GGACGATGCTATTACGCGACTGGAGCTCTTGGCCGTCAAGAAGGGCTCGA
ACAAAAACGCAAGCTTTCTAGACC
BO06477.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-PA | 795 | CG4194-RA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:48:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 1097 | CG4194-RA | 16..807 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:48:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2068607..2069398 | 17..808 | 3960 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:48:38 has no hits.
BO06477.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:50:46 Download gff for
BO06477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:23:53 Download gff for
BO06477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-PA | 1..795 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:44:22 Download gff for
BO06477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..810 | 6..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:45:55 Download gff for
BO06477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 2..810 | 6..812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:45:55 Download gff for
BO06477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2068593..2069401 | 6..812 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:44:22 Download gff for
BO06477.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1962626..1963434 | 6..812 | 99 | | Plus |
BO06477.complete Sequence
826 bp (826 high quality bases) assembled on 2005-10-27
GenBank Submission: FJ630416
> BO06477.complete
GAAGTTATCAGTCGACATGCTTCGCTCGCGTTCAGAAGTCTTTGTGTGTT
TGCTTATGATCCTGGGATCAGTTCTGGTCCGTTCGAATCTTGGGAATCCT
CAGGAACTGGAGCTAAGTGCGCTGCGCACCCACAAACAGCTATTGCAGGC
GGAGATCGCACGTCTTTTTTTAGAGCAGCCGCTTCGAGCGGAAACTCAAC
TTCTGCTGGAAGATCTACAGCTAAGAGATCATCAAATAGGCGTTCAGATA
GAAAAGCTCGAGGAAATCTCCAAGGGCGAGACCACGCAGAGGCTGGCCAT
CAATCTAACGGCTGACTTTGAACACCTGCAGCATAAATTGGATGATTTGA
AACGACAACTTGAGCTGCTCGACGGACGCTTTGCCTCCCAAGGGAAGCAA
CTGGAAGGACACTCGTCGGAAGGCGCATCGCCGGCTGGCCCCGGATTAGG
TTCCTTTTTGTGGGGACCCTTGCTGACCATGCCAGAGTTTCCACAGGGCA
GTGTGGCCAGCGACCAGCAACATAACCACCACCAGCAGGATCATTCCCCG
GATCCGCAGCAGGATTCCAGTCCCTCTATCATTAAAAGAGTGCTGGACAT
GCTTAGGCCATCCATAGGAGTATCAGGTCTGCGGAGTCGTTGGACTGAAT
CCGCAAAATCAGCTGCAACGGGCTTGGCAACACCTAAGCCCACTCACCCA
CTTAGTGCTGAGGAGCTCCTACCGCAGCTGCAGGAGCAGCGCAGGTTTCT
GGACGATGCTATTACGCGACTGGAGCTCTTGGCCGTCAAGAAGGGCTCGA
ACAAAAACGCAAGCTTTCTAGACCAT
BO06477.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:41:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 795 | CG4194-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-RA | 1097 | CG4194-RA | 16..807 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:41:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2068607..2069398 | 17..808 | 3960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 15:41:51 has no hits.
BO06477.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:23:29 Download gff for
BO06477.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 1..795 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:47:24 Download gff for
BO06477.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 1..808 | 7..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:44:52 Download gff for
BO06477.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 16..807 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:11 Download gff for
BO06477.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4194-RA | 16..807 | 17..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:11 Download gff for
BO06477.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2068607..2069398 | 17..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:44:52 Download gff for
BO06477.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1962640..1963431 | 17..810 | 99 | | Plus |
BO06477.pep Sequence
Translation from 16 to 826
> BO06477.pep
MLRSRSEVFVCLLMILGSVLVRSNLGNPQELELSALRTHKQLLQAEIARL
FLEQPLRAETQLLLEDLQLRDHQIGVQIEKLEEISKGETTQRLAINLTAD
FEHLQHKLDDLKRQLELLDGRFASQGKQLEGHSSEGASPAGPGLGSFLWG
PLLTMPEFPQGSVASDQQHNHHQQDHSPDPQQDSSPSIIKRVLDMLRPSI
GVSGLRSRWTESAKSAATGLATPKPTHPLSAEELLPQLQEQRRFLDDAIT
RLELLAVKKGSNKNASFLDH
BO06477.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4194-PA | 264 | CG4194-PA | 1..264 | 1..264 | 1334 | 100 | Plus |
