Clone BO06507 Report

Search the DGRC for BO06507

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:65
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG17549-RA
Protein status:BO06507.pep: validated full length
Sequenced Size:895

Clone Sequence Records

BO06507.3prime Sequence

886 bp (864 high quality bases) assembled on 2005-12-03

> BO06507.3prime
ATGGTCTAGAAAGCTTGCGGAGTGCACCGAATACGAGGTGATCTTTCCGT
TGTCGTTGACCGTGGTCTGGGCTCCACGTCGACTGGTTCCGTCTCCGTTG
CTGTGGCTGAAGGACGAGACCGAGACGCCCTTGTAGCCACCACCGCTGCC
ACCACCTCCTCCGGAGCTGCTGGAGCTGGAGAACGAGGATCCACCACCGC
TTCCGCCGCCAAAGCGATTCACAATGTTGGGAGAGGCCGGATTGGATGGG
CTAATGAAGGCCGTCTGGCGATAGCCATTGGAACCGATAGATCCGGAAGC
TGATGCATAGCTGGGTGCATAGCGATGTGAGTTGTAGGATCCCGATCCAG
ATCCAGACCCGGATCCAGAGCTGGAACTGAAGCTAGAGCTGGTGCCTCCT
CTGTACCGATTCTGGCGCACTAGATTGTCGTGGTAGGCCTGTTGAGCGGC
GATCTGTTGCTGGATGCGAATATCGTTGTCGTTGACAAGAGATGCATCCG
CGGATGCATAAGCATTGCCAGCCGTGGCCAGACCAGTTATAGCTTGTTGG
TTGGCGAAGTTCTGGGCCAAAATATGATTCGTCAGCTGCTGGTGGAATAG
ATACGGATCGATGATGCCAAAGTTGGGTGAAGTGCCGCCATAGTCATCGT
AATCGTAATAGCCACTACCGCCACCACCACCGGTACCCACATAGCTGCTG
TGTCCACCGCCACTGTTATAGCTTCCCGTATAGCCACCGGCTCCTCCTCC
ACTGCTGGCATACCCTCCGGCGTAACCGCCGGCATATGCTCGTCGTCTGC
GGGTCGGAGCCGTTTTTGCTCCCGATGACTCTTCATTCAGAGCACTCATC
ACCACACAAATAAGTAGAACCTTCCACATGTCGACT

BO06507.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:42:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-PA 864 CG17549-RA 1..861 879..19 4305 100 Minus
CG17549-PB 789 CG17549-RB 336..786 469..19 2255 100 Minus
CG17549-PC 789 CG17549-RC 336..786 469..19 2255 100 Minus
CG17549-PB 789 CG17549-RB 1..335 879..545 1675 100 Minus
CG17549-PC 789 CG17549-RC 1..335 879..545 1675 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-RD 1159 CG17549-RD 176..1036 879..19 4305 100 Minus
CG17549-RA 1054 CG17549-RA 71..931 879..19 4305 100 Minus
CG17549-RE 979 CG17549-RE 406..856 469..19 2255 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:18:47
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19388040..19388315 545..820 1380 100 Plus
2L 23513712 2L 19387537..19387769 237..469 1165 100 Plus
2L 23513712 2L 19387173..19387392 19..238 1100 100 Plus
2L 23513712 2L 19387862..19387936 470..544 375 100 Plus
2L 23513712 2L 19388474..19388534 819..879 305 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:18:50 has no hits.

BO06507.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:51:32 Download gff for BO06507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-PA 1..864 18..879 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:24:56 Download gff for BO06507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-PA 1..864 18..879 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:16:56 Download gff for BO06507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 19..879 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:02:45 Download gff for BO06507.3prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 19..879 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:02:45 Download gff for BO06507.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19387173..19387391 19..237 100 <- Plus
2L 19387538..19387769 238..469 100 <- Plus
2L 19387862..19387936 470..544 100 <- Plus
2L 19388040..19388313 545..818 100 <- Plus
2L 19388474..19388534 819..879 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:16:56 Download gff for BO06507.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19388040..19388313 545..818 100 <- Plus
arm_2L 19388474..19388534 819..879 100   Plus
arm_2L 19387173..19387391 19..237 100 <- Plus
arm_2L 19387538..19387769 238..469 100 <- Plus
arm_2L 19387862..19387936 470..544 100 <- Plus

BO06507.5prime Sequence

893 bp (804 high quality bases) assembled on 2005-12-03

> BO06507.5prime
GAAGTTATCAGTCGACATGTGGAAGGTTCTACTTATTTGTGTGGTGATGA
GTGCTCTGAATGAAGAGTCATCGGGAGCAAAAACGGCTCCGACCCGCAGA
CGACGAGCATATGCCGGCGGTTACGCCGGAGGGTATGCCAGCAGTGGAGG
AGGAGCCGGTGGCTATACGGGAAGCTATAACAGTGGCGGTGGACACAGCA
GCTATGTGGGTACCGGTGGTGGTGGCGGTAGTGGCTATTACGATTACGAT
GACTATGGCGGCACTTCACCCAACTTTGGCATCATCGATCCGTATCTATT
CCACCAGCAGCTGACGAATCATATTTTGGCCCAGAACTTCGCCAACCAAC
AAGCTATAACTGGTCTGGCCACGGCTGGCAATGCTTATGCATCCGCGGAT
GCATCTCTTGTCAACGACAACGATATTCGCATCCAGCAACAGATCGCCGC
TCAACAGGCCTACCACGACAATCTAGTGCGCCAGAATCGGTACAGAGGAG
GCACCAGCTCTAGCTTCAGTTCCAGCTCTGGATCCGGGTCTGGATCTGGA
TCGGGATCCTACAACTCACATCGCTATGCACCCAGCTATGCATCAGCTTC
CGGATCTATCGGTTCCAATGGCTATCGCCAGACGGCCTTCATTAGCCCAT
CCAATCCGGCCTCTCCCAACATTGTGAATCGCTTTGGCGGCGGAAGCGGT
GGTGGATCCTCGTTCTCCAGCTCCAGCAGCTCCGGAGGAGGTGGTGGCAG
CGGTGGTGGCTACAAGGGCGTCTCGGTCTCGTCCTTCAGCCACAGCAACG
GAGACGGAACCAGTCGACGTGGAGCCCAGACCACGGTCAACGACAACGGA
AAGATCACCTCGTATTCGGTGCACTCCGCAAGCTTTCTAGACC

BO06507.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:43:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-PA 864 CG17549-RA 1..861 17..877 4305 100 Plus
CG17549-PB 789 CG17549-RB 336..786 427..877 2255 100 Plus
CG17549-PC 789 CG17549-RC 336..786 427..877 2255 100 Plus
CG17549-PB 789 CG17549-RB 1..335 17..351 1675 100 Plus
CG17549-PC 789 CG17549-RC 1..335 17..351 1675 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 19:58:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-RD 1159 CG17549-RD 176..1036 17..877 4305 100 Plus
CG17549-RA 1054 CG17549-RA 71..931 17..877 4305 100 Plus
CG17549-RE 979 CG17549-RE 406..856 427..877 2255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 19:58:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19388040..19388315 351..76 1380 100 Minus
2L 23513712 2L 19387537..19387769 659..427 1165 100 Minus
2L 23513712 2L 19387173..19387392 877..658 1100 100 Minus
2L 23513712 2L 19387862..19387936 426..352 375 100 Minus
2L 23513712 2L 19388474..19388534 77..17 305 100 Minus
Blast to na_te.dros performed on 2015-02-04 19:58:33 has no hits.

BO06507.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:51:33 Download gff for BO06507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-PA 1..864 17..878 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:24:57 Download gff for BO06507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-PA 1..864 17..878 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:22:08 Download gff for BO06507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 17..877 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:45:49 Download gff for BO06507.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 17..877 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:45:49 Download gff for BO06507.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19387173..19387391 659..877 100 <- Minus
2L 19387538..19387769 427..658 100 <- Minus
2L 19387862..19387936 352..426 100 <- Minus
2L 19388040..19388313 78..351 100 <- Minus
2L 19388474..19388534 17..77 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:22:08 Download gff for BO06507.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19388040..19388313 78..351 100 <- Minus
arm_2L 19388474..19388534 17..77 100   Minus
arm_2L 19387173..19387391 659..877 100 <- Minus
arm_2L 19387538..19387769 427..658 100 <- Minus
arm_2L 19387862..19387936 352..426 100 <- Minus

BO06507.complete Sequence

895 bp (895 high quality bases) assembled on 2005-10-27

GenBank Submission: FJ630428

> BO06507.complete
GAAGTTATCAGTCGACATGTGGAAGGTTCTACTTATTTGTGTGGTGATGA
GTGCTCTGAATGAAGAGTCATCGGGAGCAAAAACGGCTCCGACCCGCAGA
CGACGAGCATATGCCGGCGGTTACGCCGGAGGGTATGCCAGCAGTGGAGG
AGGAGCCGGTGGCTATACGGGAAGCTATAACAGTGGCGGTGGACACAGCA
GCTATGTGGGTACCGGTGGTGGTGGCGGTAGTGGCTATTACGATTACGAT
GACTATGGCGGCACTTCACCCAACTTTGGCATCATCGATCCGTATCTATT
CCACCAGCAGCTGACGAATCATATTTTGGCCCAGAACTTCGCCAACCAAC
AAGCTATAACTGGTCTGGCCACGGCTGGCAATGCTTATGCATCCGCGGAT
GCATCTCTTGTCAACGACAACGATATTCGCATCCAGCAACAGATCGCCGC
TCAACAGGCCTACCACGACAATCTAGTGCGCCAGAATCGGTACAGAGGAG
GCACCAGCTCTAGCTTCAGTTCCAGCTCTGGATCCGGGTCTGGATCTGGA
TCGGGATCCTACAACTCACATCGCTATGCACCCAGCTATGCATCAGCTTC
CGGATCTATCGGTTCCAATGGCTATCGCCAGACGGCCTTCATTAGCCCAT
CCAATCCGGCCTCTCCCAACATTGTGAATCGCTTTGGCGGCGGAAGCGGT
GGTGGATCCTCGTTCTCCAGCTCCAGCAGCTCCGGAGGAGGTGGTGGCAG
CGGTGGTGGCTACAAGGGCGTCTCGGTCTCGTCCTTCAGCCACAGCAACG
GAGACGGAACCAGTCGACGTGGAGCCCAGACCACGGTCAACGACAACGGA
AAGATCACCTCGTATTCGGTGCACTCCGCAAGCTTTCTAGACCAT

BO06507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:02:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-RD 864 CG17549-PD 1..861 17..877 4305 100 Plus
CG17549-RA 864 CG17549-PA 1..861 17..877 4305 100 Plus
CG17549-RE 789 CG17549-PE 336..786 427..877 2255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-RD 1159 CG17549-RD 176..1036 17..877 4305 100 Plus
CG17549-RA 1054 CG17549-RA 71..931 17..877 4305 100 Plus
CG17549-RE 979 CG17549-RE 406..856 427..877 2255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:02:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19388040..19388315 351..76 1380 100 Minus
2L 23513712 2L 19387537..19387769 659..427 1165 100 Minus
2L 23513712 2L 19387173..19387392 877..658 1100 100 Minus
2L 23513712 2L 19387862..19387936 426..352 375 100 Minus
2L 23513712 2L 19388474..19388534 77..17 305 100 Minus
Blast to na_te.dros performed on 2014-11-28 01:02:22 has no hits.

BO06507.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:22:58 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 1..864 17..878 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:46:48 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 17..877 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:05:13 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 17..879 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:22:58 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 17..877 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:31:32 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
CG17549-RA 71..931 17..879 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:31:32 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19387538..19387769 427..658 100 <- Minus
2L 19387862..19387936 352..426 100 <- Minus
2L 19388040..19388313 78..351 100 <- Minus
2L 19388474..19388534 17..77 100   Minus
2L 19387171..19387391 659..879 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:05:13 Download gff for BO06507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19387538..19387769 427..658 100 <- Minus
arm_2L 19387862..19387936 352..426 100 <- Minus
arm_2L 19387171..19387391 659..879 99 <- Minus
arm_2L 19388040..19388313 78..351 100 <- Minus
arm_2L 19388474..19388534 17..77 100   Minus

BO06507.pep Sequence

Translation from 16 to 895

> BO06507.pep
MWKVLLICVVMSALNEESSGAKTAPTRRRRAYAGGYAGGYASSGGGAGGY
TGSYNSGGGHSSYVGTGGGGGSGYYDYDDYGGTSPNFGIIDPYLFHQQLT
NHILAQNFANQQAITGLATAGNAYASADASLVNDNDIRIQQQIAAQQAYH
DNLVRQNRYRGGTSSSFSSSSGSGSGSGSGSYNSHRYAPSYASASGSIGS
NGYRQTAFISPSNPASPNIVNRFGGGSGGGSSFSSSSSSGGGGGSGGGYK
GVSVSSFSHSNGDGTSRRGAQTTVNDNGKITSYSVHSASFLDH

BO06507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:45:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG17549-PD 287 CG17549-PD 1..287 1..287 1501 100 Plus
CG17549-PA 287 CG17549-PA 1..287 1..287 1501 100 Plus
CG17549-PE 262 CG17549-PE 1..262 1..287 1339 90.9 Plus
CG17549-PC 262 CG17549-PC 1..262 1..287 1339 90.9 Plus
CG17549-PB 262 CG17549-PB 1..262 1..287 1339 90.9 Plus