BO06625.complete Sequence
748 bp assembled on 2006-10-10
GenBank Submission: FJ630466
> BO06625.complete
GAAGTTATCAGTCGACATGAGCATTAACTGGATAAAGATCACGGAAAGAG
CCCGTGAGGGCATCAAAATCATCAATGCCTTGCCCTACGAGACCTTTACG
ACGGTTCTGTTCTACACCCACCGGCAGATGAGTCCCAGCGTAGCATCGGC
GAGTGCCACCAGTAGTACAGTGGGCACCAGTGTGACGACCACCGGCCGGG
TGGACAGCAGCACCGAGGAGAACCCCACAAGTAACACCGAACCGGAGTAC
ACACTCGAGGAACTGGAGCGATTGGTGGGCGTACCGCGTCAGGACTTCCT
GCTGCTGATCAAGACCTTCTCCTACATCCTGCGTCGCATCTCCACGTTTA
TCATCAAGCCAAGTTTGCTGCAGCGTGAGCTGCGCGAGAAACTCCAGCTG
GAGGATGAGGCCAAGATCGATGCCATATTGCGTTTGTGGGTGCGCGAAAC
GACGCCCATTATGAACAATTTGGCCAGCAAGCGGTACGAATCAAATGTCA
TCGAAGATGTGGCCTGGAAGCTCAACATGGAGATCTCCTCGCATTGCCAG
CAGCGGGAGAAGACCCCGCTGGCCGTGCTCCAAATGAAAACGGCCGTCGG
CGAGGATATCAACATCGAAATGACACAACCGGAACTAATGGAACTGTACA
ATCAGTTCGAGAGCATCCAGGGCGAACTGGACGCCATGCTGGCCATGAAG
ACTACAGGAGCAACGGCGCCTGGCAATCAGGCAAGCTTTCTAGACCAT
BO06625.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:29:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2371-RB | 717 | CG2371-PB | 1..714 | 17..730 | 3570 | 100 | Plus |
| CG2371-RC | 606 | CG2371-PC | 1..603 | 128..730 | 3015 | 100 | Plus |
| CG2371-RA | 606 | CG2371-PA | 1..603 | 128..730 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2371-RB | 1155 | CG2371-RB | 118..831 | 17..730 | 3570 | 100 | Plus |
| CG2371-RC | 1246 | CG2371-RC | 239..922 | 47..730 | 3420 | 100 | Plus |
| CG2371-RA | 1076 | CG2371-RA | 148..752 | 126..730 | 3025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:29:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11677668..11678351 | 730..47 | 3420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:29:37 has no hits.
BO06625.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:50:43 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 1..717 | 17..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:05:57 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 109..831 | 6..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:26 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 118..831 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:50:44 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 109..831 | 6..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:20:09 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 118..831 | 17..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:20:09 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11677666..11678349 | 49..732 | 99 | <- | Minus |
| X | 11678403..11678434 | 17..48 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:26 Download gff for
BO06625.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11571699..11572382 | 49..732 | 99 | <- | Minus |
| arm_X | 11572436..11572467 | 17..48 | 100 | | Minus |
BO06625.pep Sequence
Translation from 16 to 748
> BO06625.pep
MSINWIKITERAREGIKIINALPYETFTTVLFYTHRQMSPSVASASATSS
TVGTSVTTTGRVDSSTEENPTSNTEPEYTLEELERLVGVPRQDFLLLIKT
FSYILRRISTFIIKPSLLQRELREKLQLEDEAKIDAILRLWVRETTPIMN
NLASKRYESNVIEDVAWKLNMEISSHCQQREKTPLAVLQMKTAVGEDINI
EMTQPELMELYNQFESIQGELDAMLAMKTTGATAPGNQASFLDH
BO06625.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2371-PB | 238 | CG2371-PB | 1..238 | 1..238 | 1193 | 100 | Plus |
| CG2371-PC | 201 | CG2371-PC | 1..201 | 38..238 | 1000 | 100 | Plus |
| CG2371-PA | 201 | CG2371-PA | 1..201 | 38..238 | 1000 | 100 | Plus |
