Clone BO06631 Report

Search the DGRC for BO06631

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:66
Well:31
Vector:pDNR-Dual
Associated Gene/TranscriptCG8321-RA
Protein status:BO06631.pep: validated full length
Sequenced Size:655

Clone Sequence Records

BO06631.3prime Sequence

653 bp (652 high quality bases) assembled on 2005-12-03

> BO06631.3prime
ATGGTCTAGAAAGCTTGCCGAGTACAAGTCGAAGTACATGAAGACCGTGA
CCAGAAATCCGCAGAACAGGGCGCACAAGTAGCCCAAGTGCATCGAGGCA
GTCTTCTCCTCGCGGAAACGTTTCTTGGAACGCGGCGTAAAGGGCGAGGG
GGGATTTACGCCGGGCACCGCGCTGTCCAAGTACACGATTCCGTACGCGA
AAGCTGCCACTAGAAGGCCACACAGCAGGGGACTCAGCCTGGAGCCCAGC
TGGTGCCTGGTGGCCCACACCAAGGTCTCGTTCCACCTACTCTGCACCTG
GTGGCTCAGCACCTGGATGGAATCGCCCGTGATGTATGGCATCGTTAAGA
TGACGCTTTTGTAGCCAATGATAAGAGTCCCAAAGAGAAGGGCCACCTTT
TTGATCAGCGGATCGAGGGCGGTCACCACTCCCACTCGCCCCTTTTCCGA
GGGTTTAGCAACACCTACGTAGTGCTCAAGTTTCGGATGCGAGGTCTTCG
GCGTGGAGGTGTAGATCCGTCCGTTCGGTTGCCCGTTTTTTTTACTTCTG
ACTGCCGTTGAGAAAATCCCATTGGTTTTGTTTTTCTCCTGCTGGCGATG
CGTGACGTCACAGCCGACTTCGGCTGGTTCCACCTGCATGTCGACTGATA
ACT

BO06631.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:45:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-PA 624 CG8321-RA 1..621 639..19 3105 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:15:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-RA 1195 CG8321-RA 186..810 643..19 3110 99.8 Minus
CG8321-RB 930 CG8321-RB 1..545 563..19 2725 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12034131..12034432 643..342 1495 99.7 Minus
2R 25286936 2R 12035488..12035710 341..119 1115 100 Minus
2R 25286936 2R 12035775..12035875 119..19 505 100 Minus
Blast to na_te.dros performed on 2015-02-11 03:15:11 has no hits.

BO06631.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:55:08 Download gff for BO06631.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-PA 1..624 18..639 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:29:49 Download gff for BO06631.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-PA 1..624 18..639 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:53:24 Download gff for BO06631.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 184..810 19..647 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:44:18 Download gff for BO06631.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 184..810 19..647 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:44:18 Download gff for BO06631.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 12034129..12034432 342..647 99 -> Minus
2R 12035488..12035710 119..341 100 -> Minus
2R 12035776..12035875 19..118 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:53:24 Download gff for BO06631.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7921634..7921937 342..647 99 -> Minus
arm_2R 7922993..7923215 119..341 100 -> Minus
arm_2R 7923281..7923380 19..118 100   Minus

BO06631.5prime Sequence

653 bp (652 high quality bases) assembled on 2005-12-03

> BO06631.5prime
GAAGTTATCAGTCGACATGCAGGTGGAACCAGCCGAAGTCGGCTGTGACG
TCACGCATCGCCAGCAGGAGAAAAACAAAACCAATGGGATTTTCTCAACG
GCAGTCAGAAGTAAAAAAAACGGGCAACCGAACGGACGGATCTACACCTC
CACGCCGAAGACCTCGCATCCGAAACTTGAGCACTACGTAGGTGTTGCTA
AACCCTCGGAAAAGGGGCGAGTGGGAGTGGTGACCGCCCTCGATCCGCTG
ATCAAAAAGGTGGCCCTTCTCTTTGGGACTCTTATCATTGGCTACAAAAG
CGTCATCTTAACGATGCCATACATCACGGGCGATTCCATCCAGGTGCTGA
GCCACCAGGTGCAGAGTAGGTGGAACGAGACCTTGGTGTGGGCCACCAGG
CACCAGCTGGGCTCCAGGCTGAGTCCCCTGCTGTGTGGCCTTCTAGTGGC
AGCTTTCGCGTACGGAATCGTGTACTTGGACAGCGCGGTGCCCGGCGTAA
ATCCCCCCTCGCCCTTTACGCCGCGTTCCAAGAAACGTTTCCGCGAGGAG
AAGACTGCCTCGATGCACTTGGGCTACTTGTGCGCCCTGTTCTGCGGATT
TCTGGTCACGGTCTTCATGTACTTCGACTTGTACTCGGCAAGCTTTCTAG
ACC

BO06631.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:45:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-PA 624 CG8321-RA 1..621 17..637 3105 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:05:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-RA 1195 CG8321-RA 186..810 13..637 3110 99.8 Plus
CG8321-RB 930 CG8321-RB 1..545 93..637 2725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:05:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12034131..12034432 13..314 1495 99.7 Plus
2R 25286936 2R 12035488..12035710 315..537 1115 100 Plus
2R 25286936 2R 12035775..12035875 537..637 505 100 Plus
Blast to na_te.dros performed on 2015-02-11 05:05:42 has no hits.

BO06631.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:55:09 Download gff for BO06631.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-PA 1..624 17..638 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:29:51 Download gff for BO06631.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-PA 1..624 17..638 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:19:22 Download gff for BO06631.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 184..810 9..637 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:51:02 Download gff for BO06631.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 184..810 9..637 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:51:02 Download gff for BO06631.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12035776..12035875 538..637 100   Plus
2R 12034129..12034432 9..314 99 -> Plus
2R 12035488..12035710 315..537 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:19:22 Download gff for BO06631.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7922993..7923215 315..537 100 -> Plus
arm_2R 7921634..7921937 9..314 99 -> Plus
arm_2R 7923281..7923380 538..637 100   Plus

BO06631.complete Sequence

655 bp (655 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630469

> BO06631.complete
GAAGTTATCAGTCGACATGCAGGTGGAACCAGCCGAAGTCGGCTGTGACG
TCACGCATCGCCAGCAGGAGAAAAACAAAACCAATGGGATTTTCTCAACG
GCAGTCAGAAGTAAAAAAAACGGGCAACCGAACGGACGGATCTACACCTC
CACGCCGAAGACCTCGCATCCGAAACTTGAGCACTACGTAGGTGTTGCTA
AACCCTCGGAAAAGGGGCGAGTGGGAGTGGTGACCGCCCTCGATCCGCTG
ATCAAAAAGGTGGCCCTTCTCTTTGGGACTCTTATCATTGGCTACAAAAG
CGTCATCTTAACGATGCCATACATCACGGGCGATTCCATCCAGGTGCTGA
GCCACCAGGTGCAGAGTAGGTGGAACGAGACCTTGGTGTGGGCCACCAGG
CACCAGCTGGGCTCCAGGCTGAGTCCCCTGCTGTGTGGCCTTCTAGTGGC
AGCTTTCGCGTACGGAATCGTGTACTTGGACAGCGCGGTGCCCGGCGTAA
ATCCCCCCTCGCCCTTTACGCCGCGTTCCAAGAAACGTTTCCGCGAGGAG
AAGACTGCCTCGATGCACTTGGGCTACTTGTGCGCCCTGTTCTGCGGATT
TCTGGTCACGGTCTTCATGTACTTCGACTTGTACTCGGCAAGCTTTCTAG
ACCAT

BO06631.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:53:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-RA 624 CG8321-PA 1..621 17..637 3105 100 Plus
CG8321-RB 327 CG8321-PB 1..324 314..637 1620 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:53:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-RA 1195 CG8321-RA 186..810 13..637 3110 99.8 Plus
CG8321-RB 930 CG8321-RB 1..545 93..637 2725 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12034131..12034432 13..314 1495 99.7 Plus
2R 25286936 2R 12035488..12035710 315..537 1115 100 Plus
2R 25286936 2R 12035775..12035875 537..637 505 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:53:51 has no hits.

BO06631.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:22:07 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 1..624 17..638 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:45:41 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 182..808 9..637 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:12:40 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 190..810 17..639 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:22:07 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 182..808 9..637 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:30:29 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
CG8321-RA 190..810 17..639 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:30:29 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12034135..12034432 17..314 100 -> Plus
2R 12035488..12035710 315..537 100 -> Plus
2R 12035776..12035875 538..639 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:12:40 Download gff for BO06631.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7922993..7923215 315..537 100 -> Plus
arm_2R 7921640..7921937 17..314 100 -> Plus
arm_2R 7923281..7923380 538..639 98   Plus

BO06631.pep Sequence

Translation from 16 to 655

> BO06631.pep
MQVEPAEVGCDVTHRQQEKNKTNGIFSTAVRSKKNGQPNGRIYTSTPKTS
HPKLEHYVGVAKPSEKGRVGVVTALDPLIKKVALLFGTLIIGYKSVILTM
PYITGDSIQVLSHQVQSRWNETLVWATRHQLGSRLSPLLCGLLVAAFAYG
IVYLDSAVPGVNPPSPFTPRSKKRFREEKTASMHLGYLCALFCGFLVTVF
MYFDLYSASFLDH

BO06631.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG8321-PA 207 CG8321-PA 1..207 1..207 1083 100 Plus
CG8321-PB 108 CG8321-PB 1..108 100..207 575 100 Plus