Clone BO06634 Report

Search the DGRC for BO06634

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:66
Well:34
Vector:pDNR-Dual
Associated Gene/Transcriptunc-119-RA
Protein status:BO06634.pep: validated full length
Sequenced Size:829

Clone Sequence Records

BO06634.3prime Sequence

827 bp (826 high quality bases) assembled on 2005-12-03

> BO06634.3prime
ATGGTCTAGAAAGCTTGCGACTATATTGCCGCCATCGTAGGCGTAGTCGG
CTTTGTTGTGCATGACGAGTCGGTTTCCCACAAAGTAAAAGCTGTCCGAG
CGCGTCTCAAAGGGGCTCGATATCATCTCAGCAACTAGGTCGGGTGGAAG
GTTAGGAAACTCGTAGATGTGCTCAACCGTATTCTTCGAAAATGGAAAGC
AAAAGCCGAACTCAAAGTCAAACGTCTTTAGCAGGCGATCGCGGAAGAAG
TGGCGTTCGATCATACGAAAATTATTAAGCGGCTGGCTGCCCACAGTGAA
TTCCACAGTGGCTCCCACTGTTTTGAGGTTGAGAAATGCCGGTGTGAACT
GATAGCGCACATAGCGTCCGGCATTTGGATCGGCAGTGTCATCCAGTGAC
AATTTCTCGGCAGCCGCCAGCATGGTTTCATCCGAGGACAGTCCTTCCGG
ATATTGTTCACTCGGCGGTTTGGCGATCTCGAAGAGCACAGCGCCGCTCT
CCAGGTCGCGAATCTTGAACCGCGTGAAATCAATCTCGAACACATTTGCA
TTGGCGGAGCAGAGATAGTCGTCCGTGATCTTGGTCAGATGGAGCACCTC
GTCGGGAGTCACGCTGGAAGACTCCGCAGGCCGTTTGGCATCACCGGAGG
CACCAGCGCCCGCTGCTGCAGCTCCCGACGATCCTCCACTGCCGCCGTTG
GCCTCCACTCCACTGTTCGAAGAAGAGGATCCTGCGGCCGCGGAGGAAGA
CGTTGTCACTGCGCCTGCACCGGAGGATTGCACCGGATTTAGTTGCTTAC
CCACCACGCTCATGTCGACTGATAACT

BO06634.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:45:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG1659-PA 798 unc-119-RA 1..795 813..19 3975 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:17:30
Subject Length Description Subject Range Query Range Score Percent Strand
unc-119-RC 2340 CG1659-RC 764..1558 813..19 3975 100 Minus
unc-119-RA 2031 CG1659-RA 768..1562 813..19 3975 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:17:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7289745..7290250 308..813 2530 100 Plus
X 23542271 X 7289506..7289678 135..307 865 100 Plus
X 23542271 X 7289149..7289267 19..137 595 100 Plus
Blast to na_te.dros performed on 2015-02-13 12:17:29 has no hits.

BO06634.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:55:11 Download gff for BO06634.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1659-PA 1..798 18..813 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:29:55 Download gff for BO06634.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1659-PA 1..798 18..813 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:00:06 Download gff for BO06634.3prime
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 758..1562 19..822 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:31:27 Download gff for BO06634.3prime
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 758..1562 19..822 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:31:27 Download gff for BO06634.3prime
Subject Subject Range Query Range Percent Splice Strand
X 7289149..7289264 19..134 100 <- Plus
X 7289506..7289678 135..307 100 <- Plus
X 7289745..7290260 308..822 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:00:06 Download gff for BO06634.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7183539..7183711 135..307 100 <- Plus
arm_X 7183182..7183297 19..134 100 <- Plus
arm_X 7183778..7184293 308..822 99   Plus

BO06634.5prime Sequence

827 bp (751 high quality bases) assembled on 2005-12-03

> BO06634.5prime
GAAGTTATCAGTCGACATGAGCGTGGTGGGTAAGCAACTAAATCCGGTGC
AATCCTCCGGTGCAGGCGCAGTGACAACGTCTTCCTCCGCGGCCGCAGGA
TCCTCTTCTTCGAACAGTGGAGTGGAGGCCAACGGCGGCAGTGGAGGATC
GTCGGGAGCTGCAGCAGCGGGCGCTGGTGCCTCCGGTGATGCCAAACGGC
CTGCGGAGTCTTCCAGCGTGACTCCCGACGAGGTGCTCCATCTGACCAAG
ATCACGGACGACTATCTCTGCTCCGCCAATGCAAATGTGTTCGAGATTGA
TTTCACGCGGTTCAAGATTCGCGACCTGGAGAGCGGCGCTGTGCTCTTCG
AGATCGCCAAACCGCCGAGTGAACAATATCCGGAAGGACTGTCCTCGGAT
GAAACCATGCTGGCGGCTGCCGAGAAATTGTCACTGGATGACACTGCCGA
TCCAAATGCCGGACGCTATGTGCGCTATCAGTTCACACCGGCATTTCTCA
ACCTCAAAACAGTGGGAGCCACTGTGGAATTCACTGTGGGCAGCCAGCCG
CTTAATAATTTTCGTATGATCGAACGCCACTTCTTCCGCGATCGCCTGCT
AAAGACGTTTGACTTTGAGTTCGGCTTTTGCTTTCCATTTTCGAAGAATA
CGGTTGAGCACATCTACGAGTTTCCTAACCTTCCACCCGACCTAGTTGCT
GAGATGATATCGAGCCCCTTTGAGACGCGCTCGGACAGCTTTTACTTTGT
GGGAAACCGACTCGTCATGCACAACAAAGCCGACTACGCCTACGATGGCG
GCAATATAGTCGCAAGCTTTCTAGACC

BO06634.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:45:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG1659-PA 798 unc-119-RA 1..795 17..811 3975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:05:48
Subject Length Description Subject Range Query Range Score Percent Strand
unc-119-RC 2340 CG1659-RC 764..1558 17..811 3975 100 Plus
unc-119-RA 2031 CG1659-RA 768..1562 17..811 3975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:05:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7289745..7290250 522..17 2530 100 Minus
X 23542271 X 7289506..7289678 695..523 865 100 Minus
X 23542271 X 7289149..7289267 811..693 595 100 Minus
Blast to na_te.dros performed on 2015-02-11 05:05:46 has no hits.

BO06634.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:55:13 Download gff for BO06634.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1659-PA 1..798 17..812 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:29:56 Download gff for BO06634.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1659-PA 1..798 17..812 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:19:23 Download gff for BO06634.5prime
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 758..1562 8..811 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:51:15 Download gff for BO06634.5prime
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 758..1562 8..811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:51:15 Download gff for BO06634.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7289149..7289264 696..811 100 <- Minus
X 7289506..7289678 523..695 100 <- Minus
X 7289745..7290260 8..522 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:19:23 Download gff for BO06634.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7183182..7183297 696..811 100 <- Minus
arm_X 7183539..7183711 523..695 100 <- Minus
arm_X 7183778..7184293 8..522 99   Minus

BO06634.complete Sequence

829 bp (829 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630471

> BO06634.complete
GAAGTTATCAGTCGACATGAGCGTGGTGGGTAAGCAACTAAATCCGGTGC
AATCCTCCGGTGCAGGCGCAGTGACAACGTCTTCCTCCGCGGCCGCAGGA
TCCTCTTCTTCGAACAGTGGAGTGGAGGCCAACGGCGGCAGTGGAGGATC
GTCGGGAGCTGCAGCAGCGGGCGCTGGTGCCTCCGGTGATGCCAAACGGC
CTGCGGAGTCTTCCAGCGTGACTCCCGACGAGGTGCTCCATCTGACCAAG
ATCACGGACGACTATCTCTGCTCCGCCAATGCAAATGTGTTCGAGATTGA
TTTCACGCGGTTCAAGATTCGCGACCTGGAGAGCGGCGCTGTGCTCTTCG
AGATCGCCAAACCGCCGAGTGAACAATATCCGGAAGGACTGTCCTCGGAT
GAAACCATGCTGGCGGCTGCCGAGAAATTGTCACTGGATGACACTGCCGA
TCCAAATGCCGGACGCTATGTGCGCTATCAGTTCACACCGGCATTTCTCA
ACCTCAAAACAGTGGGAGCCACTGTGGAATTCACTGTGGGCAGCCAGCCG
CTTAATAATTTTCGTATGATCGAACGCCACTTCTTCCGCGATCGCCTGCT
AAAGACGTTTGACTTTGAGTTCGGCTTTTGCTTTCCATTTTCGAAGAATA
CGGTTGAGCACATCTACGAGTTTCCTAACCTTCCACCCGACCTAGTTGCT
GAGATGATATCGAGCCCCTTTGAGACGCGCTCGGACAGCTTTTACTTTGT
GGGAAACCGACTCGTCATGCACAACAAAGCCGACTACGCCTACGATGGCG
GCAATATAGTCGCAAGCTTTCTAGACCAT

BO06634.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:34:12
Subject Length Description Subject Range Query Range Score Percent Strand
unc-119-RC 798 CG1659-PC 1..795 17..811 3975 100 Plus
unc-119-RA 798 CG1659-PA 1..795 17..811 3975 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:34:14
Subject Length Description Subject Range Query Range Score Percent Strand
unc-119-RC 2340 CG1659-RC 764..1558 17..811 3975 100 Plus
unc-119-RA 2031 CG1659-RA 768..1562 17..811 3975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7289745..7290250 522..17 2530 100 Minus
X 23542271 X 7289506..7289678 695..523 865 100 Minus
X 23542271 X 7289149..7289267 811..693 595 100 Minus
Blast to na_te.dros performed on 2014-11-27 13:34:11 has no hits.

BO06634.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:22:09 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 1..798 17..812 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:45:44 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 764..1568 8..811 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:30:43 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 768..1562 17..813 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:22:09 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 764..1568 8..811 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:21:25 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
unc-119-RA 768..1562 17..813 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:21:25 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
X 7289147..7289264 696..813 98 <- Minus
X 7289506..7289678 523..695 100 <- Minus
X 7289745..7290250 17..522 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:30:43 Download gff for BO06634.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7183180..7183297 696..813 98 <- Minus
arm_X 7183539..7183711 523..695 100 <- Minus
arm_X 7183778..7184283 17..522 100   Minus

BO06634.pep Sequence

Translation from 16 to 829

> BO06634.pep
MSVVGKQLNPVQSSGAGAVTTSSSAAAGSSSSNSGVEANGGSGGSSGAAA
AGAGASGDAKRPAESSSVTPDEVLHLTKITDDYLCSANANVFEIDFTRFK
IRDLESGAVLFEIAKPPSEQYPEGLSSDETMLAAAEKLSLDDTADPNAGR
YVRYQFTPAFLNLKTVGATVEFTVGSQPLNNFRMIERHFFRDRLLKTFDF
EFGFCFPFSKNTVEHIYEFPNLPPDLVAEMISSPFETRSDSFYFVGNRLV
MHNKADYAYDGGNIVASFLDH

BO06634.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:46:56
Subject Length Description Subject Range Query Range Score Percent Strand
unc-119-PC 265 CG1659-PC 1..265 1..265 1359 100 Plus
unc-119-PA 265 CG1659-PA 1..265 1..265 1359 100 Plus