Clone Sequence Records
BO06663.3prime Sequence
770 bp (769 high quality bases) assembled on 2005-12-03
> BO06663.3prime
ATGGTCTAGAAAGCTTGCTTTTTTTGCGAATTCAGGTGGACAATCTGGCT
GGGTACTGGGATGAGTGGCTTTGAAGACATCAAGTTCTTGTAGTTCCTGA
TTCAAGCGTACTATGGTGGGATATGGGGTCAGGTCAGCTTTGTATCTCCT
GGCATTGCGCACCTGAGGTACCAGGCAAATATCAGCCATGCTGAGCTCAT
CTCCCACACAGAATTTGCCCGCCGAATGGGAAAGAACCTTTTCGAGACCC
TGAAATCCTCGAGAAATCCAGTGTTGTGCCCATTGCAGACTCTGATCCTT
GCCTATATGATCTAGGACAGATACATTTTGCAGTGGCTGGATGCCCGAGC
AAATGAGCTCCACAATTTCACGGATCTTTGCTCTTTTAACCGGATCCTGG
GGCAGAAGTGCTGGCTGAGGTCGAGTTTCCTCCAGGTAGTGGATAATAGC
CACCGAGTCGCACAAGGTATGGCCATCAATCTTCAACGAGGGAACCTTTT
GCATCGGATTGACTTCCCTATATTCATCCGTATAGGCATGTCCGCTAACT
GTTTTTAGCAAAGAAGTCGGCTTAATGTCATAATCAATCTTCTTTATTGC
CAGCGCAACGCGAACTCTCCAAGAACACGAACTAGGCCAATAGGAATACA
GTATAGGCTTTGTTGCCAAATGTCGGAACAAGGGCTTAGACCAAGAAGAT
CTGTACAGTCCGGCCAAATGGATACCTCTGTGGGTCAATTGGGTAGCAGA
AGCCATGTCGACTGATAACT
BO06663.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9362-PA | 741 | CG9362-RA | 1..738 | 756..19 | 3665 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:05:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstZ1-RA | 913 | CG9362-RA | 102..839 | 756..19 | 3675 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:05:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9455781..9456112 | 146..477 | 1645 | 99.7 | Plus |
3R | 32079331 | 3R | 9456166..9456445 | 477..756 | 1400 | 100 | Plus |
3R | 32079331 | 3R | 9455591..9455719 | 19..147 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:05:58 has no hits.
BO06663.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:56:04 Download gff for
BO06663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-PA | 1..741 | 15..756 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:31:02 Download gff for
BO06663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-PA | 1..741 | 15..756 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:19:30 Download gff for
BO06663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstZ1-RA | 97..842 | 15..764 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:51:51 Download gff for
BO06663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstZ1-RA | 97..842 | 15..764 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:51:51 Download gff for
BO06663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9455588..9455717 | 15..145 | 98 | <- | Plus |
3R | 9455781..9456111 | 146..476 | 99 | <- | Plus |
3R | 9456166..9456450 | 477..764 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:19:30 Download gff for
BO06663.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5281310..5281439 | 15..145 | 98 | <- | Plus |
arm_3R | 5281503..5281833 | 146..476 | 99 | <- | Plus |
arm_3R | 5281888..5282172 | 477..764 | 98 | | Plus |
BO06663.5prime Sequence
770 bp (769 high quality bases) assembled on 2005-12-03
> BO06663.5prime
GAAGTTATCAGTCGACATGGCTTCTGCTACCCAATTGACCCACAGAGGTA
TCCATTTGGCCGGACTGTACAGATCTTCTTGGTCTAAGCCCTTGTTCCGA
CATTTGGCAACAAAGCCTATACTGTATTCCTATTGGCCTAGTTCGTGTTC
TTGGAGAGTTCGCGTTGCGCTGGCAATAAAGAAGATTGATTATGACATTA
AGCCGACTTCTTTGCTAAAAACAGTTAGCGGACATGCCTATACGGATGAA
TATAGGGAAGTCAATCCGATGCAAAAGGTTCCCTCGTTGAAGATTGATGG
CCATACCTTGTGCGACTCGGTGGCTATTATCCACTACCTGGAGGAAACTC
GACCTCAGCCAGCACTTCTGCCCCAGGATCCGGTTAAAAGAGCAAAGATC
CGTGAAATTGTGGAGCTCATTTGCTCGGGCATCCAGCCACTGCAAAATGT
ATCTGTCCTAGATCATATAGGCAAGGATCAGAGTCTGCAATGGGCACAAC
ACTGGATTTCTCGAGGATTTCAGGGTCTCGAAAAGGTTCTTTCCCATTCG
GCGGGCAAATTCTGTGTGGGAGATGAGCTCAGCATGGCTGATATTTGCCT
GGTACCTCAGGTGCGCAATGCCAGGAGATACAAAGCTGACCTGACCCCAT
ATCCCACCATAGTACGCTTGAATCAGGAACTACAAGAACTTGATGTCTTC
AAAGCCACTCATCCCAGTACCCAGCCAGATTGTCCACCTGAATTCGCAAA
AAAAGCAAGCTTTCTAGACC
BO06663.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9362-PA | 741 | CG9362-RA | 1..738 | 17..754 | 3665 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:20:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstZ1-RA | 913 | CG9362-RA | 102..839 | 17..754 | 3675 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:20:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9455781..9456112 | 627..296 | 1645 | 99.7 | Minus |
3R | 32079331 | 3R | 9456166..9456445 | 296..17 | 1400 | 100 | Minus |
3R | 32079331 | 3R | 9455591..9455719 | 754..626 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:20:51 has no hits.
BO06663.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:56:05 Download gff for
BO06663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-PA | 1..741 | 17..758 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:31:03 Download gff for
BO06663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-PA | 1..741 | 17..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:05 Download gff for
BO06663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstZ1-RA | 97..842 | 9..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:50:52 Download gff for
BO06663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstZ1-RA | 97..842 | 9..758 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:50:52 Download gff for
BO06663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9455588..9455717 | 628..758 | 98 | <- | Minus |
3R | 9455781..9456111 | 297..627 | 99 | <- | Minus |
3R | 9456166..9456450 | 9..296 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:05 Download gff for
BO06663.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5281310..5281439 | 628..758 | 98 | <- | Minus |
arm_3R | 5281503..5281833 | 297..627 | 99 | <- | Minus |
arm_3R | 5281888..5282172 | 9..296 | 98 | | Minus |
BO06663.complete Sequence
772 bp (772 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630483
> BO06663.complete
GAAGTTATCAGTCGACATGGCTTCTGCTACCCAATTGACCCACAGAGGTA
TCCATTTGGCCGGACTGTACAGATCTTCTTGGTCTAAGCCCTTGTTCCGA
CATTTGGCAACAAAGCCTATACTGTATTCCTATTGGCCTAGTTCGTGTTC
TTGGAGAGTTCGCGTTGCGCTGGCAATAAAGAAGATTGATTATGACATTA
AGCCGACTTCTTTGCTAAAAACAGTTAGCGGACATGCCTATACGGATGAA
TATAGGGAAGTCAATCCGATGCAAAAGGTTCCCTCGTTGAAGATTGATGG
CCATACCTTGTGCGACTCGGTGGCTATTATCCACTACCTGGAGGAAACTC
GACCTCAGCCAGCACTTCTGCCCCAGGATCCGGTTAAAAGAGCAAAGATC
CGTGAAATTGTGGAGCTCATTTGCTCGGGCATCCAGCCACTGCAAAATGT
ATCTGTCCTAGATCATATAGGCAAGGATCAGAGTCTGCAATGGGCACAAC
ACTGGATTTCTCGAGGATTTCAGGGTCTCGAAAAGGTTCTTTCCCATTCG
GCGGGCAAATTCTGTGTGGGAGATGAGCTCAGCATGGCTGATATTTGCCT
GGTACCTCAGGTGCGCAATGCCAGGAGATACAAAGCTGACCTGACCCCAT
ATCCCACCATAGTACGCTTGAATCAGGAACTACAAGAACTTGATGTCTTC
AAAGCCACTCATCCCAGTACCCAGCCAGATTGTCCACCTGAATTCGCAAA
AAAAGCAAGCTTTCTAGACCAT
BO06663.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:28:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstZ1-RA | 741 | CG9362-PA | 1..738 | 17..754 | 3675 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:28:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstZ1-RA | 913 | CG9362-RA | 102..839 | 17..754 | 3675 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:28:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9455781..9456112 | 627..296 | 1645 | 99.7 | Minus |
3R | 32079331 | 3R | 9456166..9456445 | 296..17 | 1400 | 100 | Minus |
3R | 32079331 | 3R | 9455591..9455719 | 754..626 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:28:28 has no hits.
BO06663.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:22:01 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-RA | 1..741 | 17..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:45:33 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-RA | 93..838 | 9..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:07 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstZ1-RA | 102..832 | 17..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:22:01 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9362-RA | 93..838 | 9..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:49 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstZ1-RA | 102..832 | 17..747 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:22:49 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9455781..9456111 | 297..627 | 99 | <- | Minus |
3R | 9456166..9456445 | 17..296 | 100 | | Minus |
3R | 9455598..9455717 | 628..747 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:07 Download gff for
BO06663.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5281888..5282167 | 17..296 | 100 | | Minus |
arm_3R | 5281320..5281439 | 628..747 | 100 | <- | Minus |
arm_3R | 5281503..5281833 | 297..627 | 99 | <- | Minus |
BO06663.pep Sequence
Translation from 16 to 772
> BO06663.pep
MASATQLTHRGIHLAGLYRSSWSKPLFRHLATKPILYSYWPSSCSWRVRV
ALAIKKIDYDIKPTSLLKTVSGHAYTDEYREVNPMQKVPSLKIDGHTLCD
SVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDH
IGKDQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVR
NARRYKADLTPYPTIVRLNQELQELDVFKATHPSTQPDCPPEFAKKASFL
DH
BO06663.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:47:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstZ1-PA | 246 | CG9362-PA | 1..246 | 1..246 | 1305 | 100 | Plus |
GstZ2-PB | 220 | CG9363-PB | 8..220 | 33..246 | 794 | 67.3 | Plus |
GstZ2-PA | 227 | CG9363-PA | 15..227 | 33..246 | 790 | 66.8 | Plus |
GstZ2-PC | 215 | CG9363-PC | 4..215 | 34..246 | 789 | 67.1 | Plus |
GstE6-PA | 222 | CG17530-PA | 3..199 | 33..229 | 151 | 29.4 | Plus |