Clone Sequence Records
BO06715.3prime Sequence
686 bp (685 high quality bases) assembled on 2005-12-03
> BO06715.3prime
ATGGTCTAGAAAGCTTGCACATTCCATGGCCAGTGAGTTGGAGTTCTCGT
TCAAGGCCTTGATTCCGTTCTCCATTGGCATGGCCAAACTATTATCATCT
TCGGGATGGATAACTGCTGAAGCCGCCTCCGATGTGGACGGTCCATCGGT
GGCCATCTCATCTTGATGGCCGTTCTCCACGCCATTTCCATTCCCGTTGA
TGTGCCCGTAGTCCCAATTGATTTTGAATCGGGTGACGCGCGGCTTGCTG
GCCAGGATGTTTCGCGTCAGCTTCTCGAAAAGAGGCTTTGTTGGCGGGTT
CTCGCGCATCTCCGGGTCAGCGTAGTCGTTATTCACATAGTAGCCCACGC
GGACGAACTCCTGGCCGCGGTAGGAGCAGGTAAGCAGAACAATGGTAACG
CCCACCGCATCCGGTTCCGGGATCTTGCTGACGTCTGGCGGATCCGCCTG
GAAGACAAAGATGTGTCGCCCCTCAGGCACAGGTCCCACGTATATGGTGT
CCAGCACCTGGTCGTGCTCCTCGGACTCCGCCGAGCCTACATAGATCATC
TTCCACTCTAGATCCTCTTTTAGCTCCTCAATGCACTCGAACGTGAGTTC
GAACTGAAAGGGGTTGAAGAAGCTGCTCGGGTTGTCCAGCACCACCACGT
TGGTGATGTGCACCTTGGCCATGTCGACTGATAACT
BO06715.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:47:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9383-PA | 657 | asf1-RA | 1..654 | 672..19 | 3270 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:06:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
asf1-RB | 1129 | CG9383-RB | 285..939 | 673..19 | 3275 | 100 | Minus |
asf1-RA | 1505 | CG9383-RA | 285..939 | 673..19 | 3275 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:06:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19619178..19619832 | 673..19 | 3275 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 05:06:46 has no hits.
BO06715.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:57:30 Download gff for
BO06715.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-PA | 1..657 | 16..672 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:33:01 Download gff for
BO06715.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9383-PA | 1..657 | 16..672 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:19:49 Download gff for
BO06715.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 276..947 | 12..686 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:54:13 Download gff for
BO06715.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 276..947 | 12..686 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:54:13 Download gff for
BO06715.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19619169..19619840 | 12..686 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:19:49 Download gff for
BO06715.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19612269..19612940 | 12..686 | 98 | | Minus |
BO06715.5prime Sequence
686 bp (685 high quality bases) assembled on 2005-12-03
> BO06715.5prime
GAAGTTATCAGTCGACATGGCCAAGGTGCACATCACCAACGTGGTGGTGC
TGGACAACCCGAGCAGCTTCTTCAACCCCTTTCAGTTCGAACTCACGTTC
GAGTGCATTGAGGAGCTAAAAGAGGATCTAGAGTGGAAGATGATCTATGT
AGGCTCGGCGGAGTCCGAGGAGCACGACCAGGTGCTGGACACCATATACG
TGGGACCTGTGCCTGAGGGGCGACACATCTTTGTCTTCCAGGCGGATCCG
CCAGACGTCAGCAAGATCCCGGAACCGGATGCGGTGGGCGTTACCATTGT
TCTGCTTACCTGCTCCTACCGCGGCCAGGAGTTCGTCCGCGTGGGCTACT
ATGTGAATAACGACTACGCTGACCCGGAGATGCGCGAGAACCCGCCAACA
AAGCCTCTTTTCGAGAAGCTGACGCGAAACATCCTGGCCAGCAAGCCGCG
CGTCACCCGATTCAAAATCAATTGGGACTACGGGCACATCAACGGGAATG
GAAATGGCGTGGAGAACGGCCATCAAGATGAGATGGCCACCGATGGACCG
TCCACATCGGAGGCGGCTTCAGCAGTTATCCATCCCGAAGATGATAATAG
TTTGGCCATGCCAATGGAGAACGGAATCAAGGCCTTGAACGAGAACTCCA
ACTCACTGGCCATGGAATGTGCAAGCTTTCTAGACC
BO06715.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:47:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9383-PA | 657 | asf1-RA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:30:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
asf1-RB | 1129 | CG9383-RB | 285..939 | 16..670 | 3275 | 100 | Plus |
asf1-RA | 1505 | CG9383-RA | 285..939 | 16..670 | 3275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:30:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19619178..19619832 | 16..670 | 3275 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:30:30 has no hits.
BO06715.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:57:31 Download gff for
BO06715.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-PA | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:33:02 Download gff for
BO06715.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9383-PA | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:18:08 Download gff for
BO06715.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 276..947 | 3..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:15:31 Download gff for
BO06715.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 276..947 | 3..677 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:15:31 Download gff for
BO06715.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19619169..19619840 | 3..677 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:18:08 Download gff for
BO06715.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19612269..19612940 | 3..677 | 98 | | Plus |
BO06715.complete Sequence
688 bp (688 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630502
> BO06715.complete
GAAGTTATCAGTCGACATGGCCAAGGTGCACATCACCAACGTGGTGGTGC
TGGACAACCCGAGCAGCTTCTTCAACCCCTTTCAGTTCGAACTCACGTTC
GAGTGCATTGAGGAGCTAAAAGAGGATCTAGAGTGGAAGATGATCTATGT
AGGCTCGGCGGAGTCCGAGGAGCACGACCAGGTGCTGGACACCATATACG
TGGGACCTGTGCCTGAGGGGCGACACATCTTTGTCTTCCAGGCGGATCCG
CCAGACGTCAGCAAGATCCCGGAACCGGATGCGGTGGGCGTTACCATTGT
TCTGCTTACCTGCTCCTACCGCGGCCAGGAGTTCGTCCGCGTGGGCTACT
ATGTGAATAACGACTACGCTGACCCGGAGATGCGCGAGAACCCGCCAACA
AAGCCTCTTTTCGAGAAGCTGACGCGAAACATCCTGGCCAGCAAGCCGCG
CGTCACCCGATTCAAAATCAATTGGGACTACGGGCACATCAACGGGAATG
GAAATGGCGTGGAGAACGGCCATCAAGATGAGATGGCCACCGATGGACCG
TCCACATCGGAGGCGGCTTCAGCAGTTATCCATCCCGAAGATGATAATAG
TTTGGCCATGCCAATGGAGAACGGAATCAAGGCCTTGAACGAGAACTCCA
ACTCACTGGCCATGGAATGTGCAAGCTTTCTAGACCAT
BO06715.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:32:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
asf1-RB | 657 | CG9383-PB | 1..654 | 17..670 | 3270 | 100 | Plus |
asf1-RA | 657 | CG9383-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:32:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
asf1-RB | 1129 | CG9383-RB | 285..939 | 16..670 | 3275 | 100 | Plus |
asf1-RA | 1505 | CG9383-RA | 285..939 | 16..670 | 3275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:32:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19619178..19619832 | 16..670 | 3275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:32:14 has no hits.
BO06715.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:23:07 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 1..657 | 17..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:42:54 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 278..949 | 3..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:59:55 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 286..939 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:23:07 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 278..949 | 3..677 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:21:18 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
asf1-RA | 286..939 | 17..672 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:21:18 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19619179..19619832 | 17..672 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:59:55 Download gff for
BO06715.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19612279..19612932 | 17..672 | 99 | | Plus |
BO06715.pep Sequence
Translation from 16 to 688
> BO06715.pep
MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAES
EEHDQVLDTIYVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCS
YRGQEFVRVGYYVNNDYADPEMRENPPTKPLFEKLTRNILASKPRVTRFK
INWDYGHINGNGNGVENGHQDEMATDGPSTSEAASAVIHPEDDNSLAMPM
ENGIKALNENSNSLAMECASFLDH
BO06715.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:57:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
asf1-PB | 218 | CG9383-PB | 1..218 | 1..218 | 1162 | 100 | Plus |
asf1-PA | 218 | CG9383-PA | 1..218 | 1..218 | 1162 | 100 | Plus |