Clone BO06743 Report

Search the DGRC for BO06743

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:67
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG8067-RA
Protein status:BO06743.pep: validated full length
Sequenced Size:1033

Clone Sequence Records

BO06743.3prime Sequence

989 bp (832 high quality bases) assembled on 2005-12-03

> BO06743.3prime
ATGGTCTAGAAAGCTTGCATCTCCCGCTTTGGTGTCCAGCTTGCCGCCCT
TTTCGATAATCGACCCTAGATCCTTGAGCGACACCTCACCGGTTCCTCTT
TCCAGAGGCTGTGGCTGATTGGGACCGGGTTTCCAGCCCACAAAGTAGAT
GATTTGGAAGGTTGCAGGTATCCCCTTCTCGTTGGGCTTTGCATACAGCT
CCTGGTAGATGGCACTGGCCGCGAGCATCGTTTCTCGACTAAGATGAGCG
GGTCGATTGAATGCAGCATTGTTCTCTGCCATACCCTTGAGATCCCACAT
CAGTTCGAACATGCTGGGATAGCCGATGACCAGTTCATCGGTGTCTATTG
TCAGCATGGTGAAGCCGGCGCGATTAAGCAGGGAACCAATATCCCTAATC
TGAGTGAAGGGCGAGATGTGCGGAGATATGCCACCTTTGCGCTCCAGCTC
GGCCAATTGGAGCGAGGAGCGCAGCTCGTAGAGGGTGTCTCCACCAAACA
TGGAGGCTATAAAGACCCCATCCGGTTTCAGACTCTGCTTAATTCTGACA
AAGCAGCCCGGCAGATCATTCACCCAGTGCAGACTTAGGCTAGAGATGAC
CAGATCCAGTGAATTGTCCTCAAAATCCAGCTGCTCTTCGTCCTTAACTA
GTTTCACCATTTTCAGACCCGGAGTGCCCTGTGCCTGCTCCAGCATCGTA
GCACTGGTGTCCGTGAGCGTCAGCTGCTCCACACTCTCCGCCAGAATGTG
TCTGGACAGATAGCCGCGACTGCATCCGATATCCGCCGCCGCCTTGAACT
CCCGCTTAATGTCGAATACTCTGTCAGCCAGGCGGAAGCCGATCTCCTCC
TTCAGTAATCGTATAGTCCAACGTCTTCGCTGAGTGCGGCCCTTTCCTTT
CTGTATCTCTTGGCATTGCGGTCAAATATATGTTGCGATGTTTGGGTGAG
TGAGGATAGGGCGCGGAAGTCACATTTGACCTTTAGGGT

BO06743.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-PA 1002 CG8067-RA 164..999 854..19 4180 100 Minus
CG8067-PA 1002 CG8067-RA 32..112 985..905 355 97.5 Minus
CG8067-PA 1002 CG8067-RA 118..163 899..854 230 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:02:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-RB 1321 CG8067-RB 260..1231 989..19 4745 99.4 Minus
CG8067-RA 1146 CG8067-RA 85..1056 989..19 4745 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:02:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13984198..13984803 624..19 3030 100 Minus
2R 25286936 2R 13983882..13984140 882..625 1245 99.6 Minus
2R 25286936 2R 13983714..13983823 989..880 430 92.7 Minus
Blast to na_te.dros performed on 2015-02-12 07:02:57 has no hits.

BO06743.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:12 Download gff for BO06743.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-PA 28..1002 18..989 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:33:59 Download gff for BO06743.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-PA 28..1002 18..989 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:33:33 Download gff for BO06743.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 85..1062 11..989 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:02:38 Download gff for BO06743.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 85..1062 11..989 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:02:38 Download gff for BO06743.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 13983714..13983823 880..989 95 -> Minus
2R 13983885..13984140 625..879 99 -> Minus
2R 13984198..13984809 11..624 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:33:33 Download gff for BO06743.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9871219..9871328 880..989 95 -> Minus
arm_2R 9871390..9871645 625..879 99 -> Minus
arm_2R 9871703..9872314 11..624 99   Minus

BO06743.5prime Sequence

857 bp (796 high quality bases) assembled on 2005-12-03

> BO06743.5prime
GAAGTTATCAGTCGACATGTTAAGAAAATTAACAAAACTATCGACCTTAA
AGGTCAAATGTGAACTCCGCGCCCTATCCTCACTCACCCAAACATCGCAA
CATATATTTGACCGCAATGCCAAGAGATTACAGAAGGAAAGGGCCGCACT
CAGCGAAGACGTTGGACTATACGATTACTTGAAGGAGGAGATCGGCTTCC
GCCTGGCTGACAGAGTATTCGACATTAAGCGGGAGTTCAAGGCGGCGGCG
GATATCGGATGCAGTCGCGGCTATCTGTCCAGACACATTCTGGCGGAGAG
TGTGGAGCAGCTGACGCTCACGGACACCAGTGCTACGATGCTGGAGCAGG
CACAGGGCACTCCGGGTCTGAAAATGGTGAAACTAGTTAAGGACGAAGAG
CAGCTGGATTTTGAGGACAATTCACTGGATCTGGTCATCTCTAGCCTAAG
TCTGCACTGGGTGAATGATCTGCCGGGCTGCTTTGTCAGAATTAAGCAGA
GTCTGAAACCGGATGGGGTCTTTATAGCCTCCATGTTTGGTGGAGACACC
CTCTACGAGCTGCGCTCCTCGCTCCAATTGGCCGAGCTGGAGCGCAAAGG
TGGCATATCTCCGCACATCTCGCCCTTCACTCAGATTAGGGATATTGGTT
CCCTGCTTAATCGCGCCGGCTTCACCATGCTGACAATAGACACCGATGAA
CTGGTCATCGGCTATCCCAGCATGTTCGAACTGATGTGGGATCTCAAGGG
TATGGCAGAGAACAATGCTGCATTCAATCGACCCGCTCATCTTAGTCGAG
AAACGATGCTCGCGGCCAGTGCCATCTACCAGGAGCTGTATGCAAAGCCC
AACGAGA

BO06743.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-PA 1002 CG8067-RA 1..841 17..857 4205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:03:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-RB 1321 CG8067-RB 233..1073 17..857 4205 100 Plus
CG8067-RA 1146 CG8067-RA 58..898 17..857 4205 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13984198..13984645 410..857 2240 100 Plus
2R 25286936 2R 13983882..13984140 151..409 1295 100 Plus
2R 25286936 2R 13983687..13983823 17..153 685 100 Plus
Blast to na_te.dros performed on 2015-02-12 07:03:08 has no hits.

BO06743.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:13 Download gff for BO06743.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-PA 1..840 17..856 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:01 Download gff for BO06743.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-PA 1..840 17..856 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:33:35 Download gff for BO06743.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 49..897 10..856 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:03:11 Download gff for BO06743.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 49..897 10..856 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:03:11 Download gff for BO06743.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13983678..13983823 10..153 97 -> Plus
2R 13983885..13984140 154..409 100 -> Plus
2R 13984198..13984644 410..856 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:33:35 Download gff for BO06743.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9871183..9871328 10..153 97 -> Plus
arm_2R 9871390..9871645 154..409 100 -> Plus
arm_2R 9871703..9872149 410..856 100   Plus

BO06743.complete Sequence

1033 bp (1033 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630514

> BO06743.complete
GAAGTTATCAGTCGACATGTTAAGAAAATTAACAAAACTATCGACCTTAA
AGGTCAAATGTGAACTCCGCGCCCTATCCTCACTCACCCAAACATCGCAA
CATATATTTGACCGCAATGCCAAGAGATTACAGAAGGAAAGGGCCGCACT
CAGCGAAGACGTTGGACTATACGATTACTTGAAGGAGGAGATCGGCTTCC
GCCTGGCTGACAGAGTATTCGACATTAAGCGGGAGTTCAAGGCGGCGGCG
GATATCGGATGCAGTCGCGGCTATCTGTCCAGACACATTCTGGCGGAGAG
TGTGGAGCAGCTGACGCTCACGGACACCAGTGCTACGATGCTGGAGCAGG
CACAGGGCACTCCGGGTCTGAAAATGGTGAAACTAGTTAAGGACGAAGAG
CAGCTGGATTTTGAGGACAATTCACTGGATCTGGTCATCTCTAGCCTAAG
TCTGCACTGGGTGAATGATCTGCCGGGCTGCTTTGTCAGAATTAAGCAGA
GTCTGAAACCGGATGGGGTCTTTATAGCCTCCATGTTTGGTGGAGACACC
CTCTACGAGCTGCGCTCCTCGCTCCAATTGGCCGAGCTGGAGCGCAAAGG
TGGCATATCTCCGCACATCTCGCCCTTCACTCAGATTAGGGATATTGGTT
CCCTGCTTAATCGCGCCGGCTTCACCATGCTGACAATAGACACCGATGAA
CTGGTCATCGGCTATCCCAGCATGTTCGAACTGATGTGGGATCTCAAGGG
TATGGCAGAGAACAATGCTGCATTCAATCGACCCGCTCATCTTAGTCGAG
AAACGATGCTCGCGGCCAGTGCCATCTACCAGGAGCTGTATGCAAAGCCC
AACGAGAAGGGGATACCTGCAACCTTCCAAATCATCTACTTTGTGGGCTG
GAAACCCGGTCCCAATCAGCCACAGCCTCTGGAAAGAGGAACCGGTGAGG
TGTCGCTCAAGGATCTAGGGTCGATTATCGAAAAGGGCGGCAAGCTGGAC
ACCAAAGCGGGAGATGCAAGCTTTCTAGACCAT

BO06743.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:08:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-RB 1002 CG8067-PB 1..999 17..1015 4995 100 Plus
CG8067-RA 1002 CG8067-PA 1..999 17..1015 4995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-RB 1321 CG8067-RB 233..1231 17..1015 4995 100 Plus
CG8067-RA 1146 CG8067-RA 58..1056 17..1015 4995 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:08:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13984198..13984803 410..1015 3030 100 Plus
2R 25286936 2R 13983882..13984140 151..409 1295 100 Plus
2R 25286936 2R 13983687..13983823 17..153 685 100 Plus
Blast to na_te.dros performed on 2014-11-27 20:08:11 has no hits.

BO06743.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:37 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 1..1002 17..1016 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:59 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 27..1040 10..1023 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:06 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 63..1056 22..1017 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:37 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 27..1040 10..1023 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:36 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
CG8067-RA 63..1056 22..1017 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:36 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13983885..13984140 154..409 100 -> Plus
2R 13983692..13983823 22..153 100 -> Plus
2R 13984198..13984803 410..1017 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:06 Download gff for BO06743.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9871197..9871328 22..153 100 -> Plus
arm_2R 9871390..9871645 154..409 100 -> Plus
arm_2R 9871703..9872308 410..1017 99   Plus

BO06743.pep Sequence

Translation from 16 to 1033

> BO06743.pep
MLRKLTKLSTLKVKCELRALSSLTQTSQHIFDRNAKRLQKERAALSEDVG
LYDYLKEEIGFRLADRVFDIKREFKAAADIGCSRGYLSRHILAESVEQLT
LTDTSATMLEQAQGTPGLKMVKLVKDEEQLDFEDNSLDLVISSLSLHWVN
DLPGCFVRIKQSLKPDGVFIASMFGGDTLYELRSSLQLAELERKGGISPH
ISPFTQIRDIGSLLNRAGFTMLTIDTDELVIGYPSMFELMWDLKGMAENN
AAFNRPAHLSRETMLAASAIYQELYAKPNEKGIPATFQIIYFVGWKPGPN
QPQPLERGTGEVSLKDLGSIIEKGGKLDTKAGDASFLDH

BO06743.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG8067-PB 333 CG8067-PB 1..333 1..333 1695 100 Plus
CG8067-PA 333 CG8067-PA 1..333 1..333 1695 100 Plus