Clone Sequence Records
BO06744.3prime Sequence
674 bp (673 high quality bases) assembled on 2005-12-03
> BO06744.3prime
ATGGTCTAGAAAGCTTGCGTACGGTCTGGATGGCGGTGGCATGGGCATCA
GGGGACCCATGATTGGGTAAGGGGCGGAGCCCCCAGACGCGGGATAGAAT
CCGCTGGAGGGCACGTTTCCGTAGGCTGGCAGAGAAGTATTTGGGCCCGG
ACCCTGGCGCTGTTTGCGCATCAGCTCCTGCATTTTTTCGGCCTTGAGGC
GACGCAGGTGCATGGTCCTCCGGATAGGGAGGAACGCGTCCAGAAAGTCC
TCCACGCCGATATCGCTGTCGTTGAACTTCTTGACCATCTCCTCGGTCTG
CTCCTCGCTCTCGGAGGCAGCTGTCTGCAGCAGGGCCAGCGCCGTTTCAA
GGCCCACTCCGCCCGACTTCTCCTTGAGCTGTGAGAGTTTCTCCTGGACA
GAGGAGCACCTGGTGCGCCCATCCTCCGAGAGTTCTGCCAGCTGCCCCCG
CAGCTCGATGATCTGCGGCTCCCGCTCGATATTGCGCTCCGCCCGACTCC
TGTTGTCCTCGAAAACACTGGTCTTTTGTGTTCGGAGCACCTGGAGAACT
TCGTCAACCTTCTCGTCCAGCTTGTCGTCATCGTTCAGCAGTTCCTTCAG
CTCCTCGTGGCACATCGGGGTGATGGTGGCCCGCAGTTGGTATAGGTATT
CCTGGTACATGTCGACTGATAACT
BO06744.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1115-PA | 645 | CG1115-RA | 1..642 | 660..19 | 3210 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:59:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 1041 | CG1115-RC | 113..754 | 660..19 | 3210 | 100 | Minus |
Vps37B-RB | 975 | CG1115-RB | 113..754 | 660..19 | 3210 | 100 | Minus |
Vps37B-RA | 1024 | CG1115-RA | 113..754 | 660..19 | 3210 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:59:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5226270..5226911 | 660..19 | 3210 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:59:16 has no hits.
BO06744.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:14 Download gff for
BO06744.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 16..660 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:02 Download gff for
BO06744.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 16..660 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:45:12 Download gff for
BO06744.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 104..763 | 11..669 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:47:46 Download gff for
BO06744.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps37B-RA | 104..763 | 11..669 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:47:46 Download gff for
BO06744.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5226261..5226915 | 14..669 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:45:12 Download gff for
BO06744.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1051983..1052637 | 14..669 | 99 | -> | Minus |
BO06744.5prime Sequence
674 bp (673 high quality bases) assembled on 2005-12-03
> BO06744.5prime
GAAGTTATCAGTCGACATGTACCAGGAATACCTATACCAACTGCGGGCCA
CCATCACCCCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGATGAC
GACAAGCTGGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAACACA
AAAGACCAGTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATATCG
AGCGGGAGCCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCG
GAGGATGGGCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCT
CAAGGAGAAGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGC
AGACAGCTGCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAG
TTCAACGACAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCC
TATCCGGAGGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGG
AGCTGATGCGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCA
GCCTACGGAAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTC
CGCCCCTTACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCATCCA
GACCGTACGCAAGCTTTCTAGACC
BO06744.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1115-PA | 645 | CG1115-RA | 1..642 | 17..658 | 3210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 12:21:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 1041 | CG1115-RC | 113..754 | 17..658 | 3210 | 100 | Plus |
Vps37B-RB | 975 | CG1115-RB | 113..754 | 17..658 | 3210 | 100 | Plus |
Vps37B-RA | 1024 | CG1115-RA | 113..754 | 17..658 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 12:21:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5226270..5226911 | 17..658 | 3210 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 12:21:04 has no hits.
BO06744.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:15 Download gff for
BO06744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 17..661 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:04 Download gff for
BO06744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-PA | 1..645 | 17..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:00:44 Download gff for
BO06744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 104..763 | 8..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:33:48 Download gff for
BO06744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps37B-RA | 104..763 | 8..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 14:33:48 Download gff for
BO06744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5226261..5226915 | 8..663 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:00:44 Download gff for
BO06744.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1051983..1052637 | 8..663 | 99 | -> | Plus |
BO06744.complete Sequence
676 bp (676 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630515
> BO06744.complete
GAAGTTATCAGTCGACATGTACCAGGAATACCTATACCAACTGCGGGCCA
CCATCACCCCGATGTGCCACGAGGAGCTGAAGGAACTGCTGAACGATGAC
GACAAGCTGGACGAGAAGGTTGACGAAGTTCTCCAGGTGCTCCGAACACA
AAAGACCAGTGTTTTCGAGGACAACAGGAGTCGGGCGGAGCGCAATATCG
AGCGGGAGCCGCAGATCATCGAGCTGCGGGGGCAGCTGGCAGAACTCTCG
GAGGATGGGCGCACCAGGTGCTCCTCTGTCCAGGAGAAACTCTCACAGCT
CAAGGAGAAGTCGGGCGGAGTGGGCCTTGAAACGGCGCTGGCCCTGCTGC
AGACAGCTGCCTCCGAGAGCGAGGAGCAGACCGAGGAGATGGTCAAGAAG
TTCAACGACAGCGATATCGGCGTGGAGGACTTTCTGGACGCGTTCCTCCC
TATCCGGAGGACCATGCACCTGCGTCGCCTCAAGGCCGAAAAAATGCAGG
AGCTGATGCGCAAACAGCGCCAGGGTCCGGGCCCAAATACTTCTCTGCCA
GCCTACGGAAACGTGCCCTCCAGCGGATTCTATCCCGCGTCTGGGGGCTC
CGCCCCTTACCCAATCATGGGTCCCCTGATGCCCATGCCACCGCCATCCA
GACCGTACGCAAGCTTTCTAGACCAT
BO06744.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:40:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 645 | CG1115-PC | 1..642 | 17..658 | 3210 | 100 | Plus |
Vps37B-RB | 645 | CG1115-PB | 1..642 | 17..658 | 3210 | 100 | Plus |
Vps37B-RA | 645 | CG1115-PA | 1..642 | 17..658 | 3210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:40:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-RC | 1041 | CG1115-RC | 113..754 | 17..658 | 3210 | 100 | Plus |
Vps37B-RB | 975 | CG1115-RB | 113..754 | 17..658 | 3210 | 100 | Plus |
Vps37B-RA | 1024 | CG1115-RA | 113..754 | 17..658 | 3210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:40:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 5226270..5226911 | 17..658 | 3210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:40:32 has no hits.
BO06744.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:38 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 1..645 | 17..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:45:00 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 102..761 | 8..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:52:59 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 113..754 | 17..660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:38 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1115-RA | 102..761 | 8..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:24:00 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Vps37B-RA | 113..754 | 17..660 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:24:00 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 5226270..5226911 | 17..660 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:52:59 Download gff for
BO06744.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 1051992..1052633 | 17..660 | 99 | | Plus |
BO06744.pep Sequence
Translation from 16 to 676
> BO06744.pep
MYQEYLYQLRATITPMCHEELKELLNDDDKLDEKVDEVLQVLRTQKTSVF
EDNRSRAERNIEREPQIIELRGQLAELSEDGRTRCSSVQEKLSQLKEKSG
GVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFLPIRRTM
HLRRLKAEKMQELMRKQRQGPGPNTSLPAYGNVPSSGFYPASGGSAPYPI
MGPLMPMPPPSRPYASFLDH
BO06744.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:46:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Vps37B-PC | 214 | CG1115-PC | 1..214 | 1..214 | 1097 | 100 | Plus |
Vps37B-PB | 214 | CG1115-PB | 1..214 | 1..214 | 1097 | 100 | Plus |
Vps37B-PA | 214 | CG1115-PA | 1..214 | 1..214 | 1097 | 100 | Plus |