Clone Sequence Records
BO06749.3prime Sequence
563 bp (562 high quality bases) assembled on 2005-12-03
> BO06749.3prime
ATGGTCTAGAAAGCTTGCTTCGTAGTCGTCCTCTTCCATCGCCTGGTACT
TGTTGCGCACATGGGCGGCGATGACTTCGCGGGGATTCTTCTTGAAGTTC
TTGTCTTTGATGAGCTTTTCGAAGGACTTGACGGTGTTGACCATTTCAGT
GCGTTTTTTCCGGATCTTCTCGTTGGCACTCAGTCGGACCTCTGGTTCTG
TGAGGGCTGCCCCCTCGGAGACATCCTTTTGCTTGGTCTTCACCAGCTTG
TAGATGTCCTGCAGCGAGGGTAGGGCATCCCGCAGTGGTTTTAGATCTCC
GACAACTTTGGTCTTCTCGCGATTCTTGTGCTCCTCCTTGCGTTTCTTAC
GCGCTTCGGCGAATCTCTTGAGCAGCTTCTTGTGTTTCGCCTCGGATTTC
TCCTTCTTGGTGGTCGTCTTCTTGGGCGTAAGGGTCTTGTGGAGCAGACG
ATCCTCGCGCAGCTTGGCCTTCATGTCCTGAGCCTTCTGCTTGGCCGCCC
CCACCACGCTTTTCGCCTTGGCCCTTACATTTTTCTTCGTTTTTGCCATG
TCGACTGATAACT
BO06749.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-PA | 534 | CG16753-RA | 1..531 | 549..19 | 2655 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:20:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..608 | 549..19 | 2655 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:20:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055686 | 549..19 | 2655 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:20:04 has no hits.
BO06749.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:22 Download gff for
BO06749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 18..549 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:13 Download gff for
BO06749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 18..549 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:43:17 Download gff for
BO06749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 13..557 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:43:46 Download gff for
BO06749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 13..557 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:43:46 Download gff for
BO06749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055149..3055693 | 13..557 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:43:17 Download gff for
BO06749.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055149..3055693 | 13..557 | 99 | | Minus |
BO06749.5prime Sequence
563 bp (562 high quality bases) assembled on 2005-12-03
> BO06749.5prime
GAAGTTATCAGTCGACATGGCAAAAACGAAGAAAAATGTAAGGGCCAAGG
CGAAAAGCGTGGTGGGGGCGGCCAAGCAGAAGGCTCAGGACATGAAGGCC
AAGCTGCGCGAGGATCGTCTGCTCCACAAGACCCTTACGCCCAAGAAGAC
GACCACCAAGAAGGAGAAATCCGAGGCGAAACACAAGAAGCTGCTCAAGA
GATTCGCCGAAGCGCGTAAGAAACGCAAGGAGGAGCACAAGAATCGCGAG
AAGACCAAAGTTGTCGGAGATCTAAAACCACTGCGGGATGCCCTACCCTC
GCTGCAGGACATCTACAAGCTGGTGAAGACCAAGCAAAAGGATGTCTCCG
AGGGGGCAGCCCTCACAGAACCAGAGGTCCGACTGAGTGCCAACGAGAAG
ATCCGGAAAAAACGCACTGAAATGGTCAACACCGTCAAGTCCTTCGAAAA
GCTCATCAAAGACAAGAACTTCAAGAAGAATCCCCGCGAAGTCATCGCCG
CCCATGTGCGCAACAAGTACCAGGCGATGGAAGAGGACGACTACGAAGCA
AGCTTTCTAGACC
BO06749.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-PA | 534 | CG16753-RA | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:00:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..608 | 17..547 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055686 | 17..547 | 2655 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:00:02 has no hits.
BO06749.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:23 Download gff for
BO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 17..548 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:15 Download gff for
BO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-PA | 1..534 | 17..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:45:15 Download gff for
BO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:47:53 Download gff for
BO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 71..615 | 9..553 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:47:53 Download gff for
BO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055149..3055693 | 9..553 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:45:15 Download gff for
BO06749.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055149..3055693 | 9..553 | 99 | | Plus |
BO06749.complete Sequence
565 bp (565 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630516
> BO06749.complete
GAAGTTATCAGTCGACATGGCAAAAACGAAGAAAAATGTAAGGGCCAAGG
CGAAAAGCGTGGTGGGGGCGGCCAAGCAGAAGGCTCAGGACATGAAGGCC
AAGCTGCGCGAGGATCGTCTGCTCCACAAGACCCTTACGCCCAAGAAGAC
GACCACCAAGAAGGAGAAATCCGAGGCGAAACACAAGAAGCTGCTCAAGA
GATTCGCCGAAGCGCGTAAGAAACGCAAGGAGGAGCACAAGAATCGCGAG
AAGACCAAAGTTGTCGGAGATCTAAAACCACTGCGGGATGCCCTACCCTC
GCTGCAGGACATCTACAAGCTGGTGAAGACCAAGCAAAAGGATGTCTCCG
AGGGGGCAGCCCTCACAGAACCAGAGGTCCGACTGAGTGCCAACGAGAAG
ATCCGGAAAAAACGCACTGAAATGGTCAACACCGTCAAGTCCTTCGAAAA
GCTCATCAAAGACAAGAACTTCAAGAAGAATCCCCGCGAAGTCATCGCCG
CCCATGTGCGCAACAAGTACCAGGCGATGGAAGAGGACGACTACGAAGCA
AGCTTTCTAGACCAT
BO06749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 534 | CG16753-PA | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:46:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-RA | 764 | CG16753-RA | 78..608 | 17..547 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3055156..3055686 | 17..547 | 2655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:46:16 has no hits.
BO06749.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:12:14 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 1..534 | 17..548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:30:33 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 48..592 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:34 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 78..608 | 17..549 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:12:14 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 48..592 | 9..553 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:31:29 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16753-RA | 78..608 | 17..549 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:31:29 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3055156..3055686 | 17..549 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:34 Download gff for
BO06749.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3055156..3055686 | 17..549 | 99 | | Plus |
BO06749.pep Sequence
Translation from 16 to 565
> BO06749.pep
MAKTKKNVRAKAKSVVGAAKQKAQDMKAKLREDRLLHKTLTPKKTTTKKE
KSEAKHKKLLKRFAEARKKRKEEHKNREKTKVVGDLKPLRDALPSLQDIY
KLVKTKQKDVSEGAALTEPEVRLSANEKIRKKRTEMVNTVKSFEKLIKDK
NFKKNPREVIAAHVRNKYQAMEEDDYEASFLDH
BO06749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16753-PA | 177 | CG16753-PA | 1..177 | 1..177 | 882 | 100 | Plus |
