Clone BO06751 Report

Search the DGRC for BO06751

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:67
Well:51
Vector:pDNR-Dual
Associated Gene/Transcriptc12.1-RA
Protein status:BO06751.pep: validated full length
Sequenced Size:811

Clone Sequence Records

BO06751.3prime Sequence

809 bp (808 high quality bases) assembled on 2005-12-03

> BO06751.3prime
ATGGTCTAGAAAGCTTGCCTTAATGTACTTGTCCATGAACTTCTTGTGGA
AATCGGAGCGCAGGGCGTCATTGACGAAGTGCGTCTTCTTATCGGGCGCA
GATCTGGCGCAATTCTTAAAGACCACATCATCGTCCCAGCGGCGCTTTAT
CTTTAGATCACCGCCCAGTCCAGAGGCACGTCCCGCTGCCGAGGCGGCGG
TGCCGGGCTCATAGTTCATCAGTGGATTGCCGGACAGGATGTTCTCCATG
CGTATGCGTTCGTCCTCCTGCTTCTTTTCCGACTCGCGACGCGCCGTCTC
CTGCAGACGTTCCTGCTTGATCTTCTGCAGCTCGGCCAGCAGGGCGGCAT
CATCGTCATCGGAATCGCTGTCCGAATCGGAGCTATCGTTGTCCAGCGGC
TCATCGGCGTCCATATTGGCGGCCTGCTGCTGAGCCGCCTGCTGCGCTTG
CTGCTGCCCTGCGTCCGGCTTGGAACGCTTTGCGGCACTGCTGCCACCGC
CGGCGTTGTTCGCCTCAATCGCCTTGCGTACAATGGAGGGCAGTGCCTTG
CCCGACGACGACGAAGTGGCTCCCGTTCCGGAGCGCGCCTCACGTTCGCG
CTCCTCCAGCTCCTTGCGGAAGTCACGGTTGCGGTTCTCATCGCTGGTGC
CCTGGCCAGTCTCCCTGTATTTCAGTTTCGTGTGGCCTGGCAAATCGCGA
CTGGAGTACTGCTTGCTCAGTGCACTCAGATCCTTTTCGCCGCGACCGGA
TCCTCCGCGGGCTGGATCGAAGGTCGGACGCGCTGCTGTGGTCATGTCGA
CTGATAACT

BO06751.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG12135-PA 780 c12.1-RA 1..777 795..19 3885 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
c12.1-RA 1246 CG12135-RA 102..878 795..19 3885 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9318283..9318931 19..667 3245 100 Plus
X 23542271 X 9318991..9319122 664..795 660 100 Plus
Blast to na_te.dros performed on 2015-02-13 16:07:59 has no hits.

BO06751.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:26 Download gff for BO06751.3prime
Subject Subject Range Query Range Percent Splice Strand
c12.1-PA 1..780 18..795 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:18 Download gff for BO06751.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12135-PA 1..780 18..795 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:08:58 Download gff for BO06751.3prime
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 94..883 13..802 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:30:30 Download gff for BO06751.3prime
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 94..883 13..802 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:30:30 Download gff for BO06751.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9318278..9318928 13..664 99 <- Plus
X 9318992..9319130 665..802 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:08:58 Download gff for BO06751.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9212311..9212961 13..664 99 <- Plus
arm_X 9213025..9213163 665..802 97   Plus

BO06751.5prime Sequence

809 bp (808 high quality bases) assembled on 2005-12-03

> BO06751.5prime
GAAGTTATCAGTCGACATGACCACAGCAGCGCGTCCGACCTTCGATCCAG
CCCGCGGAGGATCCGGTCGCGGCGAAAAGGATCTGAGTGCACTGAGCAAG
CAGTACTCCAGTCGCGATTTGCCAGGCCACACGAAACTGAAATACAGGGA
GACTGGCCAGGGCACCAGCGATGAGAACCGCAACCGTGACTTCCGCAAGG
AGCTGGAGGAGCGCGAACGTGAGGCGCGCTCCGGAACGGGAGCCACTTCG
TCGTCGTCGGGCAAGGCACTGCCCTCCATTGTACGCAAGGCGATTGAGGC
GAACAACGCCGGCGGTGGCAGCAGTGCCGCAAAGCGTTCCAAGCCGGACG
CAGGGCAGCAGCAAGCGCAGCAGGCGGCTCAGCAGCAGGCCGCCAATATG
GACGCCGATGAGCCGCTGGACAACGATAGCTCCGATTCGGACAGCGATTC
CGATGACGATGATGCCGCCCTGCTGGCCGAGCTGCAGAAGATCAAGCAGG
AACGTCTGCAGGAGACGGCGCGTCGCGAGTCGGAAAAGAAGCAGGAGGAC
GAACGCATACGCATGGAGAACATCCTGTCCGGCAATCCACTGATGAACTA
TGAGCCCGGCACCGCCGCCTCGGCAGCGGGACGTGCCTCTGGACTGGGCG
GTGATCTAAAGATAAAGCGCCGCTGGGACGATGATGTGGTCTTTAAGAAT
TGCGCCAGATCTGCGCCCGATAAGAAGACGCACTTCGTCAATGACGCCCT
GCGCTCCGATTTCCACAAGAAGTTCATGGACAAGTACATTAAGGCAAGCT
TTCTAGACC

BO06751.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG12135-PA 780 c12.1-RA 1..777 17..793 3885 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
c12.1-RA 1246 CG12135-RA 102..878 17..793 3885 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9318283..9318931 793..145 3245 100 Minus
X 23542271 X 9318991..9319122 148..17 660 100 Minus
Blast to na_te.dros performed on 2015-02-11 23:00:26 has no hits.

BO06751.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:27 Download gff for BO06751.5prime
Subject Subject Range Query Range Percent Splice Strand
c12.1-PA 1..780 17..794 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:19 Download gff for BO06751.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12135-PA 1..780 17..794 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:45:18 Download gff for BO06751.5prime
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 94..883 10..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:47:56 Download gff for BO06751.5prime
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 94..883 10..799 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:47:56 Download gff for BO06751.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9318278..9318928 148..799 99 <- Minus
X 9318992..9319130 10..147 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:45:18 Download gff for BO06751.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9212311..9212961 148..799 99 <- Minus
arm_X 9213025..9213163 10..147 97   Minus

BO06751.complete Sequence

811 bp (811 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630517

> BO06751.complete
GAAGTTATCAGTCGACATGACCACAGCAGCGCGTCCGACCTTCGATCCAG
CCCGCGGAGGATCCGGTCGCGGCGAAAAGGATCTGAGTGCACTGAGCAAG
CAGTACTCCAGTCGCGATTTGCCAGGCCACACGAAACTGAAATACAGGGA
GACTGGCCAGGGCACCAGCGATGAGAACCGCAACCGTGACTTCCGCAAGG
AGCTGGAGGAGCGCGAACGTGAGGCGCGCTCCGGAACGGGAGCCACTTCG
TCGTCGTCGGGCAAGGCACTGCCCTCCATTGTACGCAAGGCGATTGAGGC
GAACAACGCCGGCGGTGGCAGCAGTGCCGCAAAGCGTTCCAAGCCGGACG
CAGGGCAGCAGCAAGCGCAGCAGGCGGCTCAGCAGCAGGCCGCCAATATG
GACGCCGATGAGCCGCTGGACAACGATAGCTCCGATTCGGACAGCGATTC
CGATGACGATGATGCCGCCCTGCTGGCCGAGCTGCAGAAGATCAAGCAGG
AACGTCTGCAGGAGACGGCGCGTCGCGAGTCGGAAAAGAAGCAGGAGGAC
GAACGCATACGCATGGAGAACATCCTGTCCGGCAATCCACTGATGAACTA
TGAGCCCGGCACCGCCGCCTCGGCAGCGGGACGTGCCTCTGGACTGGGCG
GTGATCTAAAGATAAAGCGCCGCTGGGACGATGATGTGGTCTTTAAGAAT
TGCGCCAGATCTGCGCCCGATAAGAAGACGCACTTCGTCAATGACGCCCT
GCGCTCCGATTTCCACAAGAAGTTCATGGACAAGTACATTAAGGCAAGCT
TTCTAGACCAT

BO06751.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:46:37
Subject Length Description Subject Range Query Range Score Percent Strand
c12.1-RA 780 CG12135-PA 1..777 17..793 3885 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:46:38
Subject Length Description Subject Range Query Range Score Percent Strand
c12.1-RA 1246 CG12135-RA 102..878 17..793 3885 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:46:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9318283..9318931 793..145 3245 100 Minus
X 23542271 X 9318991..9319122 148..17 660 100 Minus
Blast to na_te.dros performed on 2014-11-27 23:46:35 has no hits.

BO06751.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:08 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 1..780 17..794 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:43:03 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 115..904 10..799 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:37:37 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 102..878 17..795 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:08 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 115..904 10..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:56 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
c12.1-RA 102..878 17..795 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:56 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
X 9318281..9318928 148..795 99 <- Minus
X 9318992..9319122 17..147 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:37:37 Download gff for BO06751.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9212314..9212961 148..795 99 <- Minus
arm_X 9213025..9213155 17..147 100   Minus

BO06751.pep Sequence

Translation from 16 to 811

> BO06751.pep
MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGT
SDENRNRDFRKELEEREREARSGTGATSSSSGKALPSIVRKAIEANNAGG
GSSAAKRSKPDAGQQQAQQAAQQQAANMDADEPLDNDSSDSDSDSDDDDA
ALLAELQKIKQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTA
ASAAGRASGLGGDLKIKRRWDDDVVFKNCARSAPDKKTHFVNDALRSDFH
KKFMDKYIKASFLDH

BO06751.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:14
Subject Length Description Subject Range Query Range Score Percent Strand
c12.1-PA 259 CG12135-PA 1..259 1..259 1319 100 Plus