Clone BO06757 Report

Search the DGRC for BO06757

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:67
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG10754-RA
Protein status:BO06757.pep: validated full length
Sequenced Size:826

Clone Sequence Records

BO06757.3prime Sequence

824 bp (823 high quality bases) assembled on 2005-12-03

> BO06757.3prime
ATGGTCTAGAAAGCTTGCGTTGTTTGAAAGCATGGGTGGCGGTGGATGAA
CGCCATTGAACATGGGATGCATAGCAGGACGTGGCGGTCCCGGCATGGGG
AATCCGCCTGGGGGGCCTAGTGCCCTATGTAGATTCGGCGGCGGTGGCGG
CAGGATCTTAGGTTCGAACTTGAAGGCGAACTGAAGGAAGAACTGCTTGG
TGTCACGGTTCCAGTGCGTCCAGAACTTGCCCTCACTCTTCTCCACTTCG
CGGGACGGCACCTTGAACCCTATGGTCTCGTACGGCTCGGCGGCAAAGAG
AAGGTACTGCCACTTGCGGTCTGGCGGCTCGATCTTTTGCTCGTAGGCGG
ACATGAAGCGGTGACGCGGAACAATGGACTCCGTGATTTCCGGGTAGTCC
ACCTGAAAGAGCAACGACTGCTGGCCGTTGCTGAGTTCACGCTGCTTGGT
CACCCGGTAGCCGGGTCGTCCAATCTTGACGAACTTCTTCGGTTCCACGC
GGGGCTTCTCGGGCGCCAGCAGCGAAGAGGGTGCCTCCTTTGCCTCCTTG
GCGGCTCTTCTTGCCAGATTATCCTGATGCTTCTTGCCCTGCGTGTGGGC
CAAATAGCTGCCCTCGTTGTTGTGCAGCGTCAGGCAGAGTTTGCACTCGT
AGGAGCCCAGATGGTTCTTCATGAAGTACGGATCCTTGTTCAGATCGATT
GTCTCCAGGGCCAGTTGACGCAGTCGCTCCTTGCGGTCGCGGTTCGTCTC
CGACCAGGAGGCTACGCCTCCGCTGCCGGTCTTGCCGCCGGCGCGGTTTT
GGAAGTCCATGTCGACTGATAACT

BO06757.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-PA 795 CG10754-RA 1..792 810..19 3960 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-RA 992 CG10754-RA 113..904 810..19 3960 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12813116..12813907 19..810 3960 100 Plus
Blast to na_te.dros performed on 2015-02-13 16:08:15 has no hits.

BO06757.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:38 Download gff for BO06757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-PA 1..795 15..810 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:34 Download gff for BO06757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-PA 1..795 15..810 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:09:01 Download gff for BO06757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 113..909 11..810 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:31:41 Download gff for BO06757.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 113..909 11..810 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:31:41 Download gff for BO06757.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 12813111..12813907 11..810 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:09:01 Download gff for BO06757.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12806211..12807007 11..810 99   Plus

BO06757.5prime Sequence

824 bp (787 high quality bases) assembled on 2005-12-03

> BO06757.5prime
GAAGTTATCAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCG
GCAGCGGAGGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAG
CGACTGCGTCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTA
CTTCATGAAGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGC
TGCACAACAACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCAT
CAGGATAATCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTC
TTCGCTGCTGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCA
AGATTGGACGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAAC
GGCCAGCAGTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTC
CATTGTTCCGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGC
CGCCAGACCGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAG
ACCATAGGGTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAA
GTTCTGGACGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCG
CCTTCAAGTTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACAT
AGGGCACTAGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCC
TGCTATGCATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTT
TCAACAACGCAAGCTTTCTAGACC

BO06757.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-PA 795 CG10754-RA 1..784 17..800 3920 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-RA 992 CG10754-RA 113..904 17..808 3930 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12813116..12813907 808..17 3930 99.7 Minus
Blast to na_te.dros performed on 2015-02-04 20:09:02 has no hits.

BO06757.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:39 Download gff for BO06757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-PA 1..795 17..812 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:35 Download gff for BO06757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-PA 1..795 17..812 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:22:54 Download gff for BO06757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 113..907 17..812 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:46:27 Download gff for BO06757.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 113..907 17..812 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:46:27 Download gff for BO06757.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 12813113..12813907 17..812 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:22:54 Download gff for BO06757.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12806213..12807007 17..812 99   Minus

BO06757.complete Sequence

826 bp (826 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630520

> BO06757.complete
GAAGTTATCAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCG
GCAGCGGAGGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAG
CGACTGCGTCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTA
CTTCATGAAGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGC
TGCACAACAACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCAT
CAGGATAATCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTC
TTCGCTGCTGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCA
AGATTGGACGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAAC
GGCCAGCAGTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTC
CATTGTTCCGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGC
CGCCAGACCGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAG
ACCATAGGGTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAA
GTTCTGGACGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCG
CCTTCAAGTTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACAT
AGGGCACTAGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCC
TGCTATGCATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTT
CAAACAACGCAAGCTTTCTAGACCAT

BO06757.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-RA 795 CG10754-PA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:38:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-RA 992 CG10754-RA 113..904 17..808 3960 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:38:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12813116..12813907 808..17 3960 100 Minus
Blast to na_te.dros performed on 2014-11-27 23:38:19 has no hits.

BO06757.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:25 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 1..795 17..812 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:43 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 97..893 17..816 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:34:09 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 113..904 17..810 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:26 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 97..893 17..816 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:05:07 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
CG10754-RA 113..904 17..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:05:07 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12813114..12813907 17..810 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:34:09 Download gff for BO06757.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12806214..12807007 17..810 99   Minus

BO06757.pep Sequence

Translation from 16 to 826

> BO06757.pep
MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNH
LGSYECKLCLTLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAP
EKPRVEPKKFVKIGRPGYRVTKQRELSNGQQSLLFQVDYPEITESIVPRH
RFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSREVEKSEGKFWTHW
NRDTKQFFLQFAFKFEPKILPPPPPNLHRALGPPGGFPMPGPPRPAMHPM
FNGVHPPPPMLSNNASFLDH

BO06757.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10754-PA 264 CG10754-PA 1..264 1..264 1441 100 Plus