Clone Sequence Records
BO06757.3prime Sequence
824 bp (823 high quality bases) assembled on 2005-12-03
> BO06757.3prime
ATGGTCTAGAAAGCTTGCGTTGTTTGAAAGCATGGGTGGCGGTGGATGAA
CGCCATTGAACATGGGATGCATAGCAGGACGTGGCGGTCCCGGCATGGGG
AATCCGCCTGGGGGGCCTAGTGCCCTATGTAGATTCGGCGGCGGTGGCGG
CAGGATCTTAGGTTCGAACTTGAAGGCGAACTGAAGGAAGAACTGCTTGG
TGTCACGGTTCCAGTGCGTCCAGAACTTGCCCTCACTCTTCTCCACTTCG
CGGGACGGCACCTTGAACCCTATGGTCTCGTACGGCTCGGCGGCAAAGAG
AAGGTACTGCCACTTGCGGTCTGGCGGCTCGATCTTTTGCTCGTAGGCGG
ACATGAAGCGGTGACGCGGAACAATGGACTCCGTGATTTCCGGGTAGTCC
ACCTGAAAGAGCAACGACTGCTGGCCGTTGCTGAGTTCACGCTGCTTGGT
CACCCGGTAGCCGGGTCGTCCAATCTTGACGAACTTCTTCGGTTCCACGC
GGGGCTTCTCGGGCGCCAGCAGCGAAGAGGGTGCCTCCTTTGCCTCCTTG
GCGGCTCTTCTTGCCAGATTATCCTGATGCTTCTTGCCCTGCGTGTGGGC
CAAATAGCTGCCCTCGTTGTTGTGCAGCGTCAGGCAGAGTTTGCACTCGT
AGGAGCCCAGATGGTTCTTCATGAAGTACGGATCCTTGTTCAGATCGATT
GTCTCCAGGGCCAGTTGACGCAGTCGCTCCTTGCGGTCGCGGTTCGTCTC
CGACCAGGAGGCTACGCCTCCGCTGCCGGTCTTGCCGCCGGCGCGGTTTT
GGAAGTCCATGTCGACTGATAACT
BO06757.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-PA | 795 | CG10754-RA | 1..792 | 810..19 | 3960 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:08:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 992 | CG10754-RA | 113..904 | 810..19 | 3960 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:08:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12813116..12813907 | 19..810 | 3960 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:08:15 has no hits.
BO06757.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:38 Download gff for
BO06757.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 15..810 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:34 Download gff for
BO06757.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 15..810 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:09:01 Download gff for
BO06757.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..909 | 11..810 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:31:41 Download gff for
BO06757.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..909 | 11..810 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:31:41 Download gff for
BO06757.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12813111..12813907 | 11..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:09:01 Download gff for
BO06757.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12806211..12807007 | 11..810 | 99 | | Plus |
BO06757.5prime Sequence
824 bp (787 high quality bases) assembled on 2005-12-03
> BO06757.5prime
GAAGTTATCAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCG
GCAGCGGAGGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAG
CGACTGCGTCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTA
CTTCATGAAGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGC
TGCACAACAACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCAT
CAGGATAATCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTC
TTCGCTGCTGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCA
AGATTGGACGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAAC
GGCCAGCAGTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTC
CATTGTTCCGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGC
CGCCAGACCGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAG
ACCATAGGGTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAA
GTTCTGGACGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCG
CCTTCAAGTTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACAT
AGGGCACTAGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCC
TGCTATGCATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTT
TCAACAACGCAAGCTTTCTAGACC
BO06757.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-PA | 795 | CG10754-RA | 1..784 | 17..800 | 3920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:09:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 992 | CG10754-RA | 113..904 | 17..808 | 3930 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:08:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12813116..12813907 | 808..17 | 3930 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-04 20:09:02 has no hits.
BO06757.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:39 Download gff for
BO06757.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:35 Download gff for
BO06757.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-PA | 1..795 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:22:54 Download gff for
BO06757.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..907 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:46:27 Download gff for
BO06757.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..907 | 17..812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:46:27 Download gff for
BO06757.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12813113..12813907 | 17..812 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:22:54 Download gff for
BO06757.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12806213..12807007 | 17..812 | 99 | | Minus |
BO06757.complete Sequence
826 bp (826 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630520
> BO06757.complete
GAAGTTATCAGTCGACATGGACTTCCAAAACCGCGCCGGCGGCAAGACCG
GCAGCGGAGGCGTAGCCTCCTGGTCGGAGACGAACCGCGACCGCAAGGAG
CGACTGCGTCAACTGGCCCTGGAGACAATCGATCTGAACAAGGATCCGTA
CTTCATGAAGAACCATCTGGGCTCCTACGAGTGCAAACTCTGCCTGACGC
TGCACAACAACGAGGGCAGCTATTTGGCCCACACGCAGGGCAAGAAGCAT
CAGGATAATCTGGCAAGAAGAGCCGCCAAGGAGGCAAAGGAGGCACCCTC
TTCGCTGCTGGCGCCCGAGAAGCCCCGCGTGGAACCGAAGAAGTTCGTCA
AGATTGGACGACCCGGCTACCGGGTGACCAAGCAGCGTGAACTCAGCAAC
GGCCAGCAGTCGTTGCTCTTTCAGGTGGACTACCCGGAAATCACGGAGTC
CATTGTTCCGCGTCACCGCTTCATGTCCGCCTACGAGCAAAAGATCGAGC
CGCCAGACCGCAAGTGGCAGTACCTTCTCTTTGCCGCCGAGCCGTACGAG
ACCATAGGGTTCAAGGTGCCGTCCCGCGAAGTGGAGAAGAGTGAGGGCAA
GTTCTGGACGCACTGGAACCGTGACACCAAGCAGTTCTTCCTTCAGTTCG
CCTTCAAGTTCGAACCTAAGATCCTGCCGCCACCGCCGCCGAATCTACAT
AGGGCACTAGGCCCCCCAGGCGGATTCCCCATGCCGGGACCGCCACGTCC
TGCTATGCATCCCATGTTCAATGGCGTTCATCCACCGCCACCCATGCTTT
CAAACAACGCAAGCTTTCTAGACCAT
BO06757.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:38:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 795 | CG10754-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:38:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-RA | 992 | CG10754-RA | 113..904 | 17..808 | 3960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:38:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12813116..12813907 | 808..17 | 3960 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 23:38:19 has no hits.
BO06757.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:25 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 1..795 | 17..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:43 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 97..893 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:34:09 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..904 | 17..810 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:26 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 97..893 | 17..816 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:05:07 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10754-RA | 113..904 | 17..810 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:05:07 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12813114..12813907 | 17..810 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:34:09 Download gff for
BO06757.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12806214..12807007 | 17..810 | 99 | | Minus |
BO06757.pep Sequence
Translation from 16 to 826
> BO06757.pep
MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNH
LGSYECKLCLTLHNNEGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAP
EKPRVEPKKFVKIGRPGYRVTKQRELSNGQQSLLFQVDYPEITESIVPRH
RFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSREVEKSEGKFWTHW
NRDTKQFFLQFAFKFEPKILPPPPPNLHRALGPPGGFPMPGPPRPAMHPM
FNGVHPPPPMLSNNASFLDH
BO06757.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10754-PA | 264 | CG10754-PA | 1..264 | 1..264 | 1441 | 100 | Plus |