Clone Sequence Records
BO06761.3prime Sequence
683 bp (682 high quality bases) assembled on 2005-12-03
> BO06761.3prime
ATGGTCTAGAAAGCTTGCAAGAGTGTGGAGCACATCCATGATACGGTTGC
AATCCTCATCGGTATTTAGGCCGATTTTAACAAGATCAGCACGCTCCAAG
GATGCCAGTTCCACCAGATCGATGTGAGCCTCTTCGAAATTGGTCACATA
GTTCTCCAGGCCCATGTGCATGAGAATCTGTTCCACATTGGCGGCATGGT
TAACCACGTACGAGTGGTTCGATGCTTTGATGGAACGACGACGCGACTCC
AAGGCCAGTGAGGTCTCCATATTCGAGTCATCCGAACAGGTATCCGGGCT
GCTGCAGCTCTTTATTTCTCGCTCCGGCTCGATGATCTCCTCCTGCGGCT
TGGGCAGCACGAATGGCGGGGGCTTAAGCTGAGTGCGATGGCAGTGCTGA
TGCTGCTGCTGCTGCTGCTGCTTGGGATGCACCTTCGTTGGCACTTTCTT
GAAGGTAGCGAACCGCATGGGCGACACTGGACTCTTCCCCTTCGTGCCCA
TATTCTCGATGGGCGAGAGATTGGGCGAACGGAAGTTGCCAAAGATCGGA
GTAGAGCATCGCACGTTGGAGGTGTTCACCTTCAGGGTGTTCCATCTGCG
CTCCTTTAGCGTTGGCGTGCGATTAAGCGTAATTTTGGTCTTGTTCGTGG
GCGTGCGAGAATTCTCCATGTCGACTGATAACT
BO06761.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18543-PA | 654 | mtrm-RA | 1..651 | 669..19 | 3255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:35:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..714 | 669..19 | 3255 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:35:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413725 | 669..19 | 3255 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 23:35:56 has no hits.
BO06761.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:46 Download gff for
BO06761.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:45 Download gff for
BO06761.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18543-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:19:14 Download gff for
BO06761.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..718 | 14..669 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:31:04 Download gff for
BO06761.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..718 | 14..669 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:31:04 Download gff for
BO06761.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413729 | 14..669 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:19:14 Download gff for
BO06761.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406829 | 14..669 | 99 | | Minus |
BO06761.5prime Sequence
683 bp (682 high quality bases) assembled on 2005-12-03
> BO06761.5prime
GAAGTTATCAGTCGACATGGAGAATTCTCGCACGCCCACGAACAAGACCA
AAATTACGCTTAATCGCACGCCAACGCTAAAGGAGCGCAGATGGAACACC
CTGAAGGTGAACACCTCCAACGTGCGATGCTCTACTCCGATCTTTGGCAA
CTTCCGTTCGCCCAATCTCTCGCCCATCGAGAATATGGGCACGAAGGGGA
AGAGTCCAGTGTCGCCCATGCGGTTCGCTACCTTCAAGAAAGTGCCAACG
AAGGTGCATCCCAAGCAGCAGCAGCAGCAGCAGCATCAGCACTGCCATCG
CACTCAGCTTAAGCCCCCGCCATTCGTGCTGCCCAAGCCGCAGGAGGAGA
TCATCGAGCCGGAGCGAGAAATAAAGAGCTGCAGCAGCCCGGATACCTGT
TCGGATGACTCGAATATGGAGACCTCACTGGCCTTGGAGTCGCGTCGTCG
TTCCATCAAAGCATCGAACCACTCGTACGTGGTTAACCATGCCGCCAATG
TGGAACAGATTCTCATGCACATGGGCCTGGAGAACTATGTGACCAATTTC
GAAGAGGCTCACATCGATCTGGTGGAACTGGCATCCTTGGAGCGTGCTGA
TCTTGTTAAAATCGGCCTAAATACCGATGAGGATTGCAACCGTATCATGG
ATGTGCTCCACACTCTTGCAAGCTTTCTAGACC
BO06761.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18543-PA | 654 | mtrm-RA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..714 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:22:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413725 | 17..667 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:22:30 has no hits.
BO06761.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:47 Download gff for
BO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-PA | 1..654 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:46 Download gff for
BO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18543-PA | 1..654 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:16 Download gff for
BO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..718 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:52:07 Download gff for
BO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..718 | 17..672 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:52:07 Download gff for
BO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413729 | 17..672 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:16 Download gff for
BO06761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406829 | 17..672 | 99 | | Plus |
BO06761.complete Sequence
685 bp (685 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630522
> BO06761.complete
GAAGTTATCAGTCGACATGGAGAATTCTCGCACGCCCACGAACAAGACCA
AAATTACGCTTAATCGCACGCCAACGCTAAAGGAGCGCAGATGGAACACC
CTGAAGGTGAACACCTCCAACGTGCGATGCTCTACTCCGATCTTTGGCAA
CTTCCGTTCGCCCAATCTCTCGCCCATCGAGAATATGGGCACGAAGGGGA
AGAGTCCAGTGTCGCCCATGCGGTTCGCTACCTTCAAGAAAGTGCCAACG
AAGGTGCATCCCAAGCAGCAGCAGCAGCAGCAGCATCAGCACTGCCATCG
CACTCAGCTTAAGCCCCCGCCATTCGTGCTGCCCAAGCCGCAGGAGGAGA
TCATCGAGCCGGAGCGAGAAATAAAGAGCTGCAGCAGCCCGGATACCTGT
TCGGATGACTCGAATATGGAGACCTCACTGGCCTTGGAGTCGCGTCGTCG
TTCCATCAAAGCATCGAACCACTCGTACGTGGTTAACCATGCCGCCAATG
TGGAACAGATTCTCATGCACATGGGCCTGGAGAACTATGTGACCAATTTC
GAAGAGGCTCACATCGATCTGGTGGAACTGGCATCCTTGGAGCGTGCTGA
TCTTGTTAAAATCGGCCTAAATACCGATGAGGATTGCAACCGTATCATGG
ATGTGCTCCACACTCTTGCAAGCTTTCTAGACCAT
BO06761.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 654 | CG18543-PA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:55:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-RA | 1092 | CG18543-RA | 64..714 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8413075..8413725 | 17..667 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:55:45 has no hits.
BO06761.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:41 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 1..654 | 17..671 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:25:53 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 61..715 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:01 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..714 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:41 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 61..715 | 17..672 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:00 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mtrm-RA | 64..714 | 17..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:00 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8413075..8413725 | 17..669 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:01 Download gff for
BO06761.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8406175..8406825 | 17..669 | 99 | | Plus |
BO06761.pep Sequence
Translation from 16 to 685
> BO06761.pep
MENSRTPTNKTKITLNRTPTLKERRWNTLKVNTSNVRCSTPIFGNFRSPN
LSPIENMGTKGKSPVSPMRFATFKKVPTKVHPKQQQQQQHQHCHRTQLKP
PPFVLPKPQEEIIEPEREIKSCSSPDTCSDDSNMETSLALESRRRSIKAS
NHSYVVNHAANVEQILMHMGLENYVTNFEEAHIDLVELASLERADLVKIG
LNTDEDCNRIMDVLHTLASFLDH
BO06761.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:38:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtrm-PA | 217 | CG18543-PA | 1..217 | 1..217 | 1143 | 100 | Plus |
