Clone Sequence Records
BO06765.3prime Sequence
773 bp (772 high quality bases) assembled on 2005-12-03
> BO06765.3prime
ATGGTCTAGAAAGCTTGCAAAAAGAAGTTCCGTAACATCATTGCCGAATA
GTAGGTTCCAGGACTTGGGCACGGTGAGCTTAAAACTGCCATCGCCTCCG
TTGCGCAGCTGAAGGAAGTCTTCGCAGAGTTCGTTCAGTTCCCGGACGAT
TAGAGATGCATCGGTGGAGTTGTCGCCCTCGAGGAGATAGCGGAATAACA
GCATGACGGGCACCTTCTGCTCATCGAAGGCTTTAAACAACTGCAAGGCA
TTGCCGCCGCCATAGATGGCATCGCCCTTGTGCTCCTTCCACTTGATCAG
CTCCTCATTGCCCAGCTGGGCAGCATGCGCTTCCTTGAAGTTTTCGCTGG
CGCGGTATGCCCATGGCGACTCCTCAATGACTCGTTTCTCGAAGCCGAAA
CTGCCGCTTAGAATGACTACGCGTCTGGCGCCCTTGAGGAGCTCCACTAG
TTCCTTCTGAAAATGCGCGGTGTGGCGGGCAACCCATGGCGCCCGGAATT
GCACGACCAGTAGCTTATCCTCCGTACCCTCGTACAGTTCGCAGGAGGAG
ACCTTCTCTTTGGGCTCGTGCTGATAGGCGGAGGGTCCGTAGACCGGAAT
CAGGGCTGGATGTGTGATGGATCCAATTCGCCGGAGTTCCTTGGACGCAA
TCAACAGGTCACAGGCCAGCTGCGCCGCGTTTCCCACGCAAATGCTCGGT
ATGATTACTGTGTGCTCTGCTACGTCCAGAGTGGTACGCTTGTCCTTTAG
AAACAGCATGTCGACTGATAACT
BO06765.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-PA | 744 | CG12321-RA | 1..741 | 759..19 | 3705 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:22:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..843 | 759..19 | 3705 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:22:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187865..18188605 | 19..759 | 3705 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:22:32 has no hits.
BO06765.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:55 Download gff for
BO06765.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 15..759 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:56 Download gff for
BO06765.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 15..759 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:19 Download gff for
BO06765.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 7..759 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:52:14 Download gff for
BO06765.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 7..759 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:52:14 Download gff for
BO06765.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187855..18188605 | 7..759 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:19 Download gff for
BO06765.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013577..14014327 | 7..759 | 99 | | Plus |
BO06765.5prime Sequence
773 bp (772 high quality bases) assembled on 2005-12-03
> BO06765.5prime
GAAGTTATCAGTCGACATGCTGTTTCTAAAGGACAAGCGTACCACTCTGG
ACGTAGCAGAGCACACAGTAATCATACCGAGCATTTGCGTGGGAAACGCG
GCGCAGCTGGCCTGTGACCTGTTGATTGCGTCCAAGGAACTCCGGCGAAT
TGGATCCATCACACATCCAGCCCTGATTCCGGTCTACGGACCCTCCGCCT
ATCAGCACGAGCCCAAAGAGAAGGTCTCCTCCTGCGAACTGTACGAGGGT
ACGGAGGATAAGCTACTGGTCGTGCAATTCCGGGCGCCATGGGTTGCCCG
CCACACCGCGCATTTTCAGAAGGAACTAGTGGAGCTCCTCAAGGGCGCCA
GACGCGTAGTCATTCTAAGCGGCAGTTTCGGCTTCGAGAAACGAGTCATT
GAGGAGTCGCCATGGGCATACCGCGCCAGCGAAAACTTCAAGGAAGCGCA
TGCTGCCCAGCTGGGCAATGAGGAGCTGATCAAGTGGAAGGAGCACAAGG
GCGATGCCATCTATGGCGGCGGCAATGCCTTGCAGTTGTTTAAAGCCTTC
GATGAGCAGAAGGTGCCCGTCATGCTGTTATTCCGCTATCTCCTCGAGGG
CGACAACTCCACCGATGCATCTCTAATCGTCCGGGAACTGAACGAACTCT
GCGAAGACTTCCTTCAGCTGCGCAACGGAGGCGATGGCAGTTTTAAGCTC
ACCGTGCCCAAGTCCTGGAACCTACTATTCGGCAATGATGTTACGGAACT
TCTTTTTGCAAGCTTTCTAGACC
BO06765.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-PA | 744 | CG12321-RA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..843 | 17..757 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:22:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187865..18188605 | 757..17 | 3705 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:23:03 has no hits.
BO06765.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:58:56 Download gff for
BO06765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 17..761 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:34:57 Download gff for
BO06765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-PA | 1..744 | 17..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:02:08 Download gff for
BO06765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 17..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:17:57 Download gff for
BO06765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..853 | 17..769 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:17:57 Download gff for
BO06765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187855..18188605 | 17..769 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:02:08 Download gff for
BO06765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013577..14014327 | 17..769 | 99 | | Minus |
BO06765.complete Sequence
775 bp (775 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630523
> BO06765.complete
GAAGTTATCAGTCGACATGCTGTTTCTAAAGGACAAGCGTACCACTCTGG
ACGTAGCAGAGCACACAGTAATCATACCGAGCATTTGCGTGGGAAACGCG
GCGCAGCTGGCCTGTGACCTGTTGATTGCGTCCAAGGAACTCCGGCGAAT
TGGATCCATCACACATCCAGCCCTGATTCCGGTCTACGGACCCTCCGCCT
ATCAGCACGAGCCCAAAGAGAAGGTCTCCTCCTGCGAACTGTACGAGGGT
ACGGAGGATAAGCTACTGGTCGTGCAATTCCGGGCGCCATGGGTTGCCCG
CCACACCGCGCATTTTCAGAAGGAACTAGTGGAGCTCCTCAAGGGCGCCA
GACGCGTAGTCATTCTAAGCGGCAGTTTCGGCTTCGAGAAACGAGTCATT
GAGGAGTCGCCATGGGCATACCGCGCCAGCGAAAACTTCAAGGAAGCGCA
TGCTGCCCAGCTGGGCAATGAGGAGCTGATCAAGTGGAAGGAGCACAAGG
GCGATGCCATCTATGGCGGCGGCAATGCCTTGCAGTTGTTTAAAGCCTTC
GATGAGCAGAAGGTGCCCGTCATGCTGTTATTCCGCTATCTCCTCGAGGG
CGACAACTCCACCGATGCATCTCTAATCGTCCGGGAACTGAACGAACTCT
GCGAAGACTTCCTTCAGCTGCGCAACGGAGGCGATGGCAGTTTTAAGCTC
ACCGTGCCCAAGTCCTGGAACCTACTATTCGGCAATGATGTTACGGAACT
TCTTTTTGCAAGCTTTCTAGACCAT
BO06765.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:17:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 744 | CG12321-PA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:17:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-RA | 903 | CG12321-RA | 103..843 | 17..757 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:17:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18187865..18188605 | 757..17 | 3705 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:17:49 has no hits.
BO06765.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:28 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 1..744 | 17..761 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:47 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 58..808 | 17..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:49:27 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..843 | 17..759 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:28 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 58..808 | 17..769 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:56 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12321-RA | 103..843 | 17..759 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:56 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18187863..18188605 | 17..759 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:49:27 Download gff for
BO06765.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14013585..14014327 | 17..759 | 99 | | Minus |
BO06765.pep Sequence
Translation from 16 to 775
> BO06765.pep
MLFLKDKRTTLDVAEHTVIIPSICVGNAAQLACDLLIASKELRRIGSITH
PALIPVYGPSAYQHEPKEKVSSCELYEGTEDKLLVVQFRAPWVARHTAHF
QKELVELLKGARRVVILSGSFGFEKRVIEESPWAYRASENFKEAHAAQLG
NEELIKWKEHKGDAIYGGGNALQLFKAFDEQKVPVMLLFRYLLEGDNSTD
ASLIVRELNELCEDFLQLRNGGDGSFKLTVPKSWNLLFGNDVTELLFASF
LDH
BO06765.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12321-PA | 247 | CG12321-PA | 1..247 | 1..247 | 1280 | 100 | Plus |
