Clone BO06768 Report

Search the DGRC for BO06768

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:67
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG6933-RB
Protein status:BO06768.pep: validated full length
Sequenced Size:1087

Clone Sequence Records

BO06768.3prime Sequence

804 bp (803 high quality bases) assembled on 2005-12-03

> BO06768.3prime
ATGGTCTAGAAAGCTTGCTGTACTAGCCGTCGAATTACAAATGGCGTAAT
CGGGAATTTTGGTGGTGCAGATATTGTTCACCTCGTCGTAGTACGGCGCA
TTGGTGGGACATGATCCGGTTATTCCGCTGGAGCAGATTGTGTAGTTCTT
GCAACCCTCATCTGCCATGAATGGATTGTTAACGTTCCCACATCGGTTAT
GGGTACAGACAAAGGAGGCTGGCGAAACGCACTTGCCAGCATTGAATTGG
GTACCGGTGGGACATTGGTTCCAATAGCCAGTGGCGTTTACTGCTGCACA
GTAGTAGTACCCATAGCAGGTGACACCATCAGAAACGTACCTATAGTCAA
CAGATTCCCCATTTACAGTAAGTGGATCTGCTGCTTTAAAAGCTTCTTCG
TCACAAGCAGTTGCATTTGTTTGCCCAACAGTGAACTGGTCAGAGTTTCC
ACTGTTTGAATCTTCGCCGGTGCACGGATTCGTCGACTGGCAGTTGCCAG
TGGCTTTATTATAGTAGGGATTGGCGGTGCTGGAACATTTTTCGGAAGTG
CCATAGCCGTTGACGCAGTTGATGTAGTTGCCGCACTGGTTCGGATCGCC
TACAAAGATGTTGGACAACATGAACCGACAGATGGTGTCCTGCGGGCAGG
CGGGTCCCCATATACATTTTGTGGAGGATGCCGAATAGACGCCGCCGGTG
CCGCAATCGCCATAGGAGATTTGGCCTGTGCCATCGCAGTAGGCGTATTC
GGTGCAGTTCAACGGATTGGCCACATACATGGGAGATTTGACGTTGGAGC
ATGT

BO06768.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-PA 1056 CG6933-RA 268..1053 804..19 3930 100 Minus
CG6933-PC 1092 CG6933-RC 304..1089 804..19 3930 100 Minus
CG6933-PB 1056 CG6933-RB 268..1053 804..19 3930 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:20:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-RD 1413 CG6933-RD 512..1297 804..19 3930 100 Minus
CG6933-RE 1377 CG6933-RE 476..1261 804..19 3930 100 Minus
CG6933-RB 1246 CG6933-RB 345..1130 804..19 3930 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:20:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20218618..20219403 19..804 3930 100 Plus
Blast to na_te.dros performed on 2015-02-13 01:20:47 has no hits.

BO06768.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:01 Download gff for BO06768.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-PC 304..1092 16..804 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:03 Download gff for BO06768.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-PB 268..1056 16..804 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:30:07 Download gff for BO06768.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 345..1135 13..804 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:07:58 Download gff for BO06768.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 345..1135 13..804 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:07:58 Download gff for BO06768.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 20218613..20219403 13..804 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:30:07 Download gff for BO06768.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20211713..20212503 13..804 99   Plus

BO06768.5prime Sequence

916 bp (816 high quality bases) assembled on 2005-12-03

> BO06768.5prime
GAAGTTATCAGTCGACATGGGAGCAATCAATATGAGGATCTGTGTCGTGG
CCGCATGTCTCCTAATGGCATCGCAGGCCACCGGCTACACGATGGATGAT
CTGTGCCAACAGTGGTCGGGCTATGGATACATCGGCAATCCGAGCAACTG
CCATGCCTGGGGATACTGCAAGAACCAGGAGGTTGTGGCCTGGGGCACCT
GTCCCAACGGCTTGGTGTTCAACGCGCAGGCCGGCAGCTGTGATTACGCT
AATACCACGGTGTGCTCCACCAGTGCCGTTGAGACATGCTCCAACGTCAA
ATCTCCCATGTATGTGGCCAATCCGTTGAACTGCACCGAATACGCCTACT
GCGATGGCACAGGCCAAATCTCCTATGGCGATTGCGGCACCGGCGGCGTC
TATTCGGCATCCTCCACAAAATGTATATGGGGACCCGCCTGCCCGCAGGA
CACCATCTGTCGGTTCATGTTGTCCAACATCTTTGTAGGCGATCCGAACC
AGTGCGGCAACTACATCAACTGCGTCAACGGCTATGGCACTTCCGAAAAA
TGTTCCAGCACCGCCAATCCCTACTATAATAAAGCCACTGGCAACTGCCA
GTCGACGAATCCGTGCACCGGCGAAGATTCAAACAGTGGAAACTCTGACC
AGTTCACTGTTGGGCAAACAAATGCAACTGCTTGTGACGAAGAAGCTTTT
AAAGCAGCAGATCCACTTACTGTAAATGGGGAATCTGTTGACTATAGGTA
CGTTTCTGATGGTGTCACCTGCTATGGGTACTACTACTGTGCAGCAGTAA
ACGCCACTGGCTATTGGAACAATGTCCCACCGGTACCCATTCAATGCTGG
GCAGTGCGTTTCGCCAGCCTCCTTTGTCTGTACCATAACCGATGTGGGAC
GTTAAACATCCATCAT

BO06768.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-PB 1056 CG6933-RB 1..804 17..820 4020 100 Plus
CG6933-PA 1056 CG6933-RA 6..804 22..820 3995 100 Plus
CG6933-PC 1092 CG6933-RC 42..840 22..820 3995 100 Plus
CG6933-PB 1056 CG6933-RB 825..870 839..884 180 95.6 Plus
CG6933-PA 1056 CG6933-RA 825..870 839..884 180 95.6 Plus
CG6933-PC 1092 CG6933-RC 861..906 839..884 180 95.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 09:49:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-RE 1377 CG6933-RE 209..1109 17..913 4345 99.1 Plus
CG6933-RB 1246 CG6933-RB 78..978 17..913 4345 99.1 Plus
CG6933-RD 1413 CG6933-RD 250..1145 22..913 4320 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 09:49:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20218785..20219665 899..22 4225 99.4 Minus
Blast to na_te.dros performed on 2015-02-12 09:49:33 has no hits.

BO06768.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:02 Download gff for BO06768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-PB 1..905 17..916 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:04 Download gff for BO06768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-PB 1..905 17..916 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:42:02 Download gff for BO06768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..982 9..916 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 12:49:01 Download gff for BO06768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..982 9..916 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 12:49:01 Download gff for BO06768.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20218766..20219670 16..916 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:42:02 Download gff for BO06768.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20211866..20212770 16..916 98   Minus

BO06768.complete Sequence

1087 bp (1087 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ638645

> BO06768.complete
GAAGTTATCAGTCGACATGGGAGCAATCAATATGAGGATCTGTGTCGTGG
CCGCATGTCTCCTAATGGCATCGCAGGCCACCGGCTACACGATGGATGAT
CTGTGCCAACAGTGGTCGGGCTATGGATACATCGGCAATCCGAGCAACTG
CCATGCCTGGGGATACTGCAAGAACCAGGAGGTTGTGGCCTGGGGCACCT
GTCCCAACGGCTTGGTGTTCAACGCGCAGGCCGGCAGCTGTGATTACGCT
AATACCACGGTGTGCTCCACCAGTGCCGTTGAGACATGCTCCAACGTCAA
ATCTCCCATGTATGTGGCCAATCCGTTGAACTGCACCGAATACGCCTACT
GCGATGGCACAGGCCAAATCTCCTATGGCGATTGCGGCACCGGCGGCGTC
TATTCGGCATCCTCCACAAAATGTATATGGGGACCCGCCTGCCCGCAGGA
CACCATCTGTCGGTTCATGTTGTCCAACATCTTTGTAGGCGATCCGAACC
AGTGCGGCAACTACATCAACTGCGTCAACGGCTATGGCACTTCCGAAAAA
TGTTCCAGCACCGCCAATCCCTACTATAATAAAGCCACTGGCAACTGCCA
GTCGACGAATCCGTGCACCGGCGAAGATTCAAACAGTGGAAACTCTGACC
AGTTCACTGTTGGGCAAACAAATGCAACTGCTTGTGACGAAGAAGCTTTT
AAAGCAGCAGATCCACTTACTGTAAATGGGGAATCTGTTGACTATAGGTA
CGTTTCTGATGGTGTCACCTGCTATGGGTACTACTACTGTGCAGCAGTAA
ACGCCACTGGCTATTGGAACCAATGTCCCACCGGTACCCAATTCAATGCT
GGCAAGTGCGTTTCGCCAGCCTCCTTTGTCTGTACCCATAACCGATGTGG
GAACGTTAACAATCCATTCATGGCAGATGAGGGTTGCAAGAACTACACAA
TCTGCTCCAGCGGAATAACCGGATCATGTCCCACCAATGCGCCGTACTAC
GACGAGGTGAACAATATCTGCACCACCAAAATTCCCGATTACGCCATTTG
TAATTCGACGGCTAGTACAGCAAGCTTTCTAGACCAT

BO06768.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-RE 1056 CG6933-PE 1..1053 17..1069 5265 100 Plus
CG6933-RB 1056 CG6933-PB 1..1053 17..1069 5265 100 Plus
CG6933-RD 1092 CG6933-PD 42..1089 22..1069 5240 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-RE 1377 CG6933-RE 209..1261 17..1069 5265 100 Plus
CG6933-RB 1246 CG6933-RB 78..1130 17..1069 5265 100 Plus
CG6933-RD 1413 CG6933-RD 250..1297 22..1069 5240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:01:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20218618..20219665 1069..22 5240 100 Minus
Blast to na_te.dros performed on 2014-11-26 22:01:57 has no hits.

BO06768.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:29 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 1..1056 17..1072 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:49 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..1135 9..1075 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:44:25 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 78..1130 17..1071 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:29 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 69..1135 9..1075 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:49:12 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
CG6933-RB 78..1130 17..1071 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:49:12 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20218615..20219669 17..1071 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:44:25 Download gff for BO06768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20211715..20212769 17..1071 99   Minus

BO06768.pep Sequence

Translation from 16 to 1087

> BO06768.pep
MGAINMRICVVAACLLMASQATGYTMDDLCQQWSGYGYIGNPSNCHAWGY
CKNQEVVAWGTCPNGLVFNAQAGSCDYANTTVCSTSAVETCSNVKSPMYV
ANPLNCTEYAYCDGTGQISYGDCGTGGVYSASSTKCIWGPACPQDTICRF
MLSNIFVGDPNQCGNYINCVNGYGTSEKCSSTANPYYNKATGNCQSTNPC
TGEDSNSGNSDQFTVGQTNATACDEEAFKAADPLTVNGESVDYRYVSDGV
TCYGYYYCAAVNATGYWNQCPTGTQFNAGKCVSPASFVCTHNRCGNVNNP
FMADEGCKNYTICSSGITGSCPTNAPYYDEVNNICTTKIPDYAICNSTAS
TASFLDH

BO06768.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:24:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6933-PE 351 CG6933-PE 1..351 1..351 1992 100 Plus
CG6933-PB 351 CG6933-PB 1..351 1..351 1992 100 Plus
CG6933-PA 351 CG6933-PA 1..351 1..351 1984 99.7 Plus
CG6933-PD 363 CG6933-PD 13..363 1..351 1982 99.4 Plus
CG6933-PC 363 CG6933-PC 13..363 1..351 1982 99.4 Plus