Clone BO06771 Report

Search the DGRC for BO06771

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:67
Well:71
Vector:pDNR-Dual
Associated Gene/TranscriptCG8031-RA
Protein status:BO06771.pep: validated full length
Sequenced Size:919

Clone Sequence Records

BO06771.3prime Sequence

917 bp (896 high quality bases) assembled on 2005-12-03

> BO06771.3prime
ATGGTCTAGAAAGCTTGCCATCTCGAAGACGAGCGATCCGGAGGCGTAGC
TAACGCTGGAGTCCTCAATGTCCTGACACTGGCTGCTCTGGGCGTACTTG
AGGAACTTGAAACTCATCTTGTCGTAGCCCTGATCCTGCAGTGCCTTCAC
GGCGCCTAGCATTACTCCGATGGGATGGCGTCCGCATATCGTATTGTTGT
ACTTGCGCAAGTACTCGGTGAAGGAGTGCGGATTGAGCGACTCAATGATG
TCCATGCCCTGCTTGTCCAGCTTCTCGATGGACTTGTGAATCGCTCCGCA
GGAGCTGTCATAGTAGGTATAGCTGAAGCGATGGCCCCAGTGGCAAAAGT
CGGAAGATATCACAAACAGATTGGTGGGGTCCATCAGATACGAGGACAGC
AGGCTGCCGTACTGCGCCTCCTGTTCGGGATTGAGCGAACCCACCAGAAT
AGGCACAATGGTGAACTGATCCTTGTAGTCCTCCATCACTTTGGCAATGT
AGGGTAAATGCATCTCGATGGAGTGTTCATCCTCGTCAGTCTTCATGTCC
ATCCAAGAAAACTTTCCAGTCTTCTCAAGCTCAGAGTTGATCTGAGCATC
AATTTTGAGATCATAGAGGGGTGTCCTGTACTTCTTCGCCACGGATAAGG
CGCAGCCACGCAGACGCACATGATGCGAGGGACCCAGTATGAAGATTCGC
TTGACGACAACTGGGCTAACTTGGCGATAGGCAAAGGCAGCGCAGGCTCC
ACAGTACGTATATCCAGCATGTGGAGCAATGATGGCACGAGCCGGTCCAT
GGGACAAATCTGCGGCACCCAGCCAACGATCCAACTGTCTCGAGAGCTCG
GCGCCCGAGTCCGTGTACCAGCTGCCTGCATGGGTTGCTCTTCTGGCCGA
CATGTCGACTGATAACT

BO06771.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-PA 888 CG8031-RA 1..885 903..19 4425 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:19:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-RA 1318 CG8031-RA 131..1015 903..19 4425 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13008687..13009146 19..478 2300 100 Plus
3R 32079331 3R 13009382..13009494 591..703 565 100 Plus
3R 32079331 3R 13009204..13009315 479..590 560 100 Plus
3R 32079331 3R 13009689..13009771 773..855 415 100 Plus
3R 32079331 3R 13009559..13009627 704..772 345 100 Plus
3R 32079331 3R 13011131..13011180 854..903 250 100 Plus
Blast to na_te.dros performed on 2015-02-09 19:19:31 has no hits.

BO06771.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:07 Download gff for BO06771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-PA 1..888 16..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:12 Download gff for BO06771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-PA 1..888 16..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:06:43 Download gff for BO06771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 125..1029 6..911 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:18:37 Download gff for BO06771.3prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 125..1029 6..911 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:18:37 Download gff for BO06771.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 13008673..13009146 6..478 98 <- Plus
3R 13009204..13009315 479..590 100 <- Plus
3R 13009382..13009494 591..703 100 <- Plus
3R 13009559..13009627 704..772 100 <- Plus
3R 13009689..13009770 773..854 100 <- Plus
3R 13011132..13011186 855..911 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:06:43 Download gff for BO06771.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8834395..8834868 6..478 98 <- Plus
arm_3R 8834926..8835037 479..590 100 <- Plus
arm_3R 8835104..8835216 591..703 100 <- Plus
arm_3R 8835281..8835349 704..772 100 <- Plus
arm_3R 8835411..8835492 773..854 100 <- Plus
arm_3R 8836854..8836908 855..911 92   Plus

BO06771.5prime Sequence

919 bp (796 high quality bases) assembled on 2005-12-03

> BO06771.5prime
GAAGTTATCAGTCGACATGTCGGCCAGAAGAGCAACCCATGCAGGCAGCT
GGTACACGGACTCGGGCGCCGAGCTCTCGAGACAGTTGGATCGTTGGCTG
GGTGCCGCAGATTTGTCCCATGGACCGGCTCGTGCCATCATTGCTCCACA
TGCTGGATATACGTACTGTGGAGCCTGCGCTGCCTTTGCCTATCGCCAAG
TTAGCCCAGTTGTCGTCAAGCGAATCTTCATACTGGGTCCCTCGCATCAT
GTGCGTCTGCGTGGCTGCGCCTTATCCGTGGCGAAGAAGTACAGGACACC
CCTCTATGATCTCAAAATTGATGCTCAGATCAACTCTGAGCTTGAGAAGA
CTGGAAAGTTTTCTTGGATGGACATGAAGACTGACGAGGATGAACACTCC
ATCGAGATGCATTTACCCTACATTGCCAAAGTGATGGAGGACTACAAGGA
TCAGTTCACCATTGTGCCTATTCTGGTGGGTTCGCTCAATCCCGAACAGG
AGGCGCAGTACGGCAGCCTGCTGTCCTCGTATCTGATGGACCCCACCAAT
CTGTTTGTGATATCTTCCGACTTTTGCCACTGGGGCCATCGCTTCAGCTA
TACCTACTATGACAGCTCCTGCGGAGCGATTCACAAGTCCATCGAGAAGC
TGGACAAGCAGGGCATGGACATCATTGAGTCGCTCAATCCGCACTCCTTC
ACCGAGTACTTGCGCAAGTACAACAATACGATATGCGGACGCCATCCCAT
CGGAGTAATGCTAGGCGCCGTGAAGGCACTGCAGGATCAGGGCTACGACN
AGATGAGTTTCAAGTTCCTCAAGTACGCCCAGAGCAGCCAGTGTCAGGAC
ATTGAGGACTCCAGCGTTAGCTACGCCTCCGGATCGCTCGTCTTCGAGAT
GGCAAGCTTTCTAGACCAT

BO06771.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-PA 888 CG8031-RA 1..885 17..901 4406 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-RA 1318 CG8031-RA 131..1015 17..901 4414 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:45:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13008687..13009146 901..442 2289 99.8 Minus
3R 32079331 3R 13009382..13009494 329..217 565 100 Minus
3R 32079331 3R 13009204..13009315 441..330 560 100 Minus
3R 32079331 3R 13009689..13009771 147..65 415 100 Minus
3R 32079331 3R 13009559..13009627 216..148 345 100 Minus
3R 32079331 3R 13011131..13011180 66..17 250 100 Minus
Blast to na_te.dros performed on 2015-02-12 15:45:55 has no hits.

BO06771.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:09 Download gff for BO06771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-PA 1..888 17..904 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:13 Download gff for BO06771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-PA 1..888 17..904 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:14:32 Download gff for BO06771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 125..1029 9..914 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:22:46 Download gff for BO06771.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 125..1029 9..914 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:22:46 Download gff for BO06771.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13008673..13009146 442..914 98 <- Minus
3R 13009204..13009315 330..441 100 <- Minus
3R 13009382..13009494 217..329 100 <- Minus
3R 13009559..13009627 148..216 100 <- Minus
3R 13009689..13009770 66..147 100 <- Minus
3R 13011132..13011186 9..65 92   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:14:32 Download gff for BO06771.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8834395..8834868 442..914 98 <- Minus
arm_3R 8834926..8835037 330..441 100 <- Minus
arm_3R 8835104..8835216 217..329 100 <- Minus
arm_3R 8835281..8835349 148..216 100 <- Minus
arm_3R 8835411..8835492 66..147 100 <- Minus
arm_3R 8836854..8836908 9..65 92   Minus

BO06771.complete Sequence

919 bp (919 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630526

> BO06771.complete
GAAGTTATCAGTCGACATGTCGGCCAGAAGAGCAACCCATGCAGGCAGCT
GGTACACGGACTCGGGCGCCGAGCTCTCGAGACAGTTGGATCGTTGGCTG
GGTGCCGCAGATTTGTCCCATGGACCGGCTCGTGCCATCATTGCTCCACA
TGCTGGATATACGTACTGTGGAGCCTGCGCTGCCTTTGCCTATCGCCAAG
TTAGCCCAGTTGTCGTCAAGCGAATCTTCATACTGGGTCCCTCGCATCAT
GTGCGTCTGCGTGGCTGCGCCTTATCCGTGGCGAAGAAGTACAGGACACC
CCTCTATGATCTCAAAATTGATGCTCAGATCAACTCTGAGCTTGAGAAGA
CTGGAAAGTTTTCTTGGATGGACATGAAGACTGACGAGGATGAACACTCC
ATCGAGATGCATTTACCCTACATTGCCAAAGTGATGGAGGACTACAAGGA
TCAGTTCACCATTGTGCCTATTCTGGTGGGTTCGCTCAATCCCGAACAGG
AGGCGCAGTACGGCAGCCTGCTGTCCTCGTATCTGATGGACCCCACCAAT
CTGTTTGTGATATCTTCCGACTTTTGCCACTGGGGCCATCGCTTCAGCTA
TACCTACTATGACAGCTCCTGCGGAGCGATTCACAAGTCCATCGAGAAGC
TGGACAAGCAGGGCATGGACATCATTGAGTCGCTCAATCCGCACTCCTTC
ACCGAGTACTTGCGCAAGTACAACAATACGATATGCGGACGCCATCCCAT
CGGAGTAATGCTAGGCGCCGTGAAGGCACTGCAGGATCAGGGCTACGACA
AGATGAGTTTCAAGTTCCTCAAGTACGCCCAGAGCAGCCAGTGTCAGGAC
ATTGAGGACTCCAGCGTTAGCTACGCCTCCGGATCGCTCGTCTTCGAGAT
GGCAAGCTTTCTAGACCAT

BO06771.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-RA 888 CG8031-PA 1..885 17..901 4425 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:16:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-RA 1318 CG8031-RA 131..1015 17..901 4425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:16:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13008687..13009146 901..442 2300 100 Minus
3R 32079331 3R 13009382..13009494 329..217 565 100 Minus
3R 32079331 3R 13009204..13009315 441..330 560 100 Minus
3R 32079331 3R 13009689..13009771 147..65 415 100 Minus
3R 32079331 3R 13009559..13009627 216..148 345 100 Minus
3R 32079331 3R 13011131..13011180 66..17 250 100 Minus
Blast to na_te.dros performed on 2014-11-27 16:16:53 has no hits.

BO06771.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:18 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 1..888 17..904 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:34 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 70..974 9..914 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:51:45 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 131..1015 17..903 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:18 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 70..974 9..914 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:15:01 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
CG8031-RA 131..1015 17..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:15:01 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13009382..13009494 217..329 100 <- Minus
3R 13009559..13009627 148..216 100 <- Minus
3R 13009689..13009770 66..147 100 <- Minus
3R 13011132..13011180 17..65 100   Minus
3R 13008684..13009146 442..903 99 <- Minus
3R 13009204..13009315 330..441 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:51:45 Download gff for BO06771.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8835411..8835492 66..147 100 <- Minus
arm_3R 8836854..8836902 17..65 100   Minus
arm_3R 8834406..8834868 442..903 99 <- Minus
arm_3R 8834926..8835037 330..441 100 <- Minus
arm_3R 8835104..8835216 217..329 100 <- Minus
arm_3R 8835281..8835349 148..216 100 <- Minus

BO06771.pep Sequence

Translation from 16 to 919

> BO06771.pep
MSARRATHAGSWYTDSGAELSRQLDRWLGAADLSHGPARAIIAPHAGYTY
CGACAAFAYRQVSPVVVKRIFILGPSHHVRLRGCALSVAKKYRTPLYDLK
IDAQINSELEKTGKFSWMDMKTDEDEHSIEMHLPYIAKVMEDYKDQFTIV
PILVGSLNPEQEAQYGSLLSSYLMDPTNLFVISSDFCHWGHRFSYTYYDS
SCGAIHKSIEKLDKQGMDIIESLNPHSFTEYLRKYNNTICGRHPIGVMLG
AVKALQDQGYDKMSFKFLKYAQSSQCQDIEDSSVSYASGSLVFEMASFLD
H

BO06771.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG8031-PA 295 CG8031-PA 1..295 1..295 1565 100 Plus