Clone BO06782 Report

Search the DGRC for BO06782

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:67
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG2063-RA
Protein status:BO06782.pep: validated full length
Sequenced Size:1009

Clone Sequence Records

BO06782.3prime Sequence

918 bp (761 high quality bases) assembled on 2005-12-03

> BO06782.3prime
ATGGTCTAGAAAGCTTGCAACGGCTGGCTTCTTCGGCAGCGATCCAAAGG
CGGAAATGACAGTGCCCTTGGTGCCCGTAACCGTGGTGGTTAGAGCCGGA
AGAGTGGTCTTAACAACGGTTGACGAAGGTGCCGGTTGATCCCACTTGGA
TTTGCGCTTTTTGGCCTCCTCCTCGACTTTCCGGGCCAACGCAGTGGCCT
GCTCCACCTTGTCCATGTCCTTGCGATCTTTCTGCCGCTTCACCATCTCC
GTTTTCTGGACCGCCGCCAAGGACTCGTAATAGGACTCCTCGCCCCACTG
CAAAGGATCATAGATCTCGGGCGGATAGTTGGTACCGAACTCGTTGATGT
CGCAAAAGCTTATTAGTTTGTCATATATGCTGGGATTGCGAAATTCCTTG
CGATCCTGTATTACGCGATTCATGTCCATATTGGTCTGGTTCATCTTTGT
GTACATTTTAGTGATTTTGGCCACTAATTCGGCGGACGGCTTCCCCTTTG
GCTCGGGTGGCAGCTGGAACTTGTACTTGGCGTACTTGGCATCCTTTTCG
TAGCTCTCAGCCGTGCGTTCTTCGACCGGGAAACATGCCGGCTCCTCGTC
CACCTCCATGGGCGTGTCCCCGTCCTTGGAACCACTACCAGCATTGCTTT
TATCCTTGGCTTTGGGACTGTCTTCGCTCTGGGAATTGGAACTATTGCTC
TCGTCGCCACTGCTGGACTCCTCTTCACTAGAGGACGCTGCGGCGCGGTC
CTCGTCCTCGTCAGAAATCAGGGTGTCATCCTGGTAGCTCACCAACCGAC
GCACCTTCTTGGCCCGCTTCTTTTTCTTCTCCTTAGATCGCTTGCTTTCT
TCGTCCTGTTTGGTGGGCGTCGGCGTGGGTCGCTTGGGCGGTATGATTAC
CAGGGACGCCGTGGAGTT

BO06782.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-PA 978 CG2063-RA 76..975 918..19 4500 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:10:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-RA 1195 CG2063-RA 203..1102 918..19 4500 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9285603..9286353 155..905 3740 99.9 Plus
2R 25286936 2R 9285403..9285539 19..155 685 100 Plus
Blast to na_te.dros performed on 2015-02-04 20:10:29 has no hits.

BO06782.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:24 Download gff for BO06782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-PA 76..978 18..918 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:32 Download gff for BO06782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-PA 76..978 18..918 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:23:04 Download gff for BO06782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 203..1109 10..918 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:46:36 Download gff for BO06782.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 203..1109 10..918 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:46:36 Download gff for BO06782.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9285396..9285538 10..154 97 <- Plus
2R 9285603..9286348 155..900 100 <- Plus
2R 9286415..9286432 901..918 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:23:04 Download gff for BO06782.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5172901..5173043 10..154 97 <- Plus
arm_2R 5173108..5173853 155..900 100 <- Plus
arm_2R 5173920..5173937 901..918 100   Plus

BO06782.5prime Sequence

884 bp (751 high quality bases) assembled on 2005-12-03

> BO06782.5prime
GAAGTTATCAGTCGACATGGCTGCCCTGGCCAGCTTGACTGCCCAGTACA
CGGATTCCGAGAACGAGGGCGATGCTAGTCCGGATTCACAAAACTCCACG
GCGTCCCTGGTAATCATACCGCCCAAGCGACCCACGCCGACGCCCACCAA
ACAGGACGAAGAAAGCAAGCGATCTAAGGAGAAGAAAAAGAAGCGGGCCA
AGAAGGTGCGTCGGTTGGTGAGCTACCAGGATGACACCCTGATTTCTGAC
GAGGACGAGGACCGCGCCGCAGCGTCCTCTAGTGAAGAGGAGTCCAGCAG
TGGCGACGAGAGCAATAGTTCCAATTCCCAGAGCGAAGACAGTCCCAAAG
CCAAGGATAAAAGCAATGCTGGTAGTGGTTCCAAGGACGGGGACACGCCC
ATGGAGGTGGACGAGGAGCCGGCATGTTTCCCGGTCGAAGAACGCACGGC
TGAGAGCTACGAAAAGGATGCCAAGTACGCCAAGTACAAGTTCCAGCTGC
CACCCGAGCCAAAGGGGAAGCCGTCCGCCGAATTAGTGGCCAAAATCACT
AAAATGTACACAAAGATGAACCAGACCAATATGGACATGAATCGCGTAAT
ACAGGATCGCAAGGAATTTCGCAATCCCAGCATATATGACAAACTAATAA
GCTTTTGCGACATCAACGAGTTCGGTACCAACTATCCGCCCGAGATCTAT
GATCCTTTGCAGTGGGGCGAGGAGTCCTATTACGAGTCCTTGGCGGCGGT
CCAGAANACGGAGATGGTGAAGCGGCAGAAAGATCGCAAGGACATGGACN
AGGTGGAGCAGGCCACTGCGTTGGCCCCGGAAGTCGAGGAGGAGGCCAAA
AGCGCAAATCCAAGTGGGATCAACCGGCACCTTC

BO06782.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-PA 978 CG2063-RA 1..835 17..851 4087 99.5 Plus
CG2063-PA 978 CG2063-RA 833..869 848..884 185 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:08:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-RA 1195 CG2063-RA 128..996 17..884 4268 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9285607..9286353 851..105 3668 99.3 Minus
2R 25286936 2R 9286413..9286507 111..17 475 100 Minus
Blast to na_te.dros performed on 2015-02-13 16:08:42 has no hits.

BO06782.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:25 Download gff for BO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-PA 1..869 17..884 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:34 Download gff for BO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-PA 1..869 17..884 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:09:05 Download gff for BO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 121..996 9..884 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:33:06 Download gff for BO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 121..996 9..884 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:33:06 Download gff for BO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9285509..9285538 855..884 100 <- Minus
2R 9285603..9286348 110..854 99 <- Minus
2R 9286415..9286514 9..109 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:09:05 Download gff for BO06782.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5173014..5173043 855..884 100 <- Minus
arm_2R 5173108..5173853 110..854 99 <- Minus
arm_2R 5173920..5174019 9..109 96   Minus

BO06782.complete Sequence

1009 bp (1009 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630530

> BO06782.complete
GAAGTTATCAGTCGACATGGCTGCCCTGGCCAGCTTGACTGCCCAGTACA
CGGATTCCGAGAACGAGGGCGATGCTAGTCCGGATTCACAAAACTCCACG
GCGTCCCTGGTAATCATACCGCCCAAGCGACCCACGCCGACGCCCACCAA
ACAGGACGAAGAAAGCAAGCGATCTAAGGAGAAGAAAAAGAAGCGGGCCA
AGAAGGTGCGTCGGTTGGTGAGCTACCAGGATGACACCCTGATTTCTGAC
GAGGACGAGGACCGCGCCGCAGCGTCCTCTAGTGAAGAGGAGTCCAGCAG
TGGCGACGAGAGCAATAGTTCCAATTCCCAGAGCGAAGACAGTCCCAAAG
CCAAGGATAAAAGCAATGCTGGTAGTGGTTCCAAGGACGGGGACACGCCC
ATGGAGGTGGACGAGGAGCCGGCATGTTTCCCGGTCGAAGAACGCACGGC
TGAGAGCTACGAAAAGGATGCCAAGTACGCCAAGTACAAGTTCCAGCTGC
CACCCGAGCCAAAGGGGAAGCCGTCCGCCGAATTAGTGGCCAAAATCACT
AAAATGTACACAAAGATGAACCAGACCAATATGGACATGAATCGCGTAAT
ACAGGATCGCAAGGAATTTCGCAATCCCAGCATATATGACAAACTAATAA
GCTTTTGCGACATCAACGAGTTCGGTACCAACTATCCGCCCGAGATCTAT
GATCCTTTGCAGTGGGGCGAGGAGTCCTATTACGAGTCCTTGGCGGCGGT
CCAGAAAACGGAGATGGTGAAGCGGCAGAAAGATCGCAAGGACATGGACA
AGGTGGAGCAGGCCACTGCGTTGGCCCGGAAAGTCGAGGAGGAGGCCAAA
AAGCGCAAATCCAAGTGGGATCAACCGGCACCTTCGTCAACCGTTGTTAA
GACCACTCTTCCGGCTCTAACCACCACGGTTACGGGCACCAAGGGCACTG
TCATTTCCGCCTTTGGATCGCTGCCGAAGAAGCCAGCCGTTGCAAGCTTT
CTAGACCAT

BO06782.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:58:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-RA 978 CG2063-PA 1..975 17..991 4875 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:58:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-RA 1195 CG2063-RA 128..1102 17..991 4875 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:58:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9285603..9286353 855..105 3740 99.9 Minus
2R 25286936 2R 9285403..9285539 991..855 685 100 Minus
2R 25286936 2R 9286413..9286507 111..17 475 100 Minus
Blast to na_te.dros performed on 2014-11-27 06:58:15 has no hits.

BO06782.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:22 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 1..978 17..992 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:39 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 116..1104 9..1000 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:00:49 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 128..1102 17..993 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:22 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 116..1104 9..1000 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:26 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
CG2063-RA 128..1102 17..993 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:26 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9285401..9285538 856..993 98 <- Minus
2R 9285603..9286348 110..855 100 <- Minus
2R 9286415..9286507 17..109 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:00:49 Download gff for BO06782.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5172906..5173043 856..993 98 <- Minus
arm_2R 5173108..5173853 110..855 100 <- Minus
arm_2R 5173920..5174012 17..109 100   Minus

BO06782.pep Sequence

Translation from 16 to 1009

> BO06782.pep
MAALASLTAQYTDSENEGDASPDSQNSTASLVIIPPKRPTPTPTKQDEES
KRSKEKKKKRAKKVRRLVSYQDDTLISDEDEDRAAASSSEEESSSGDESN
SSNSQSEDSPKAKDKSNAGSGSKDGDTPMEVDEEPACFPVEERTAESYEK
DAKYAKYKFQLPPEPKGKPSAELVAKITKMYTKMNQTNMDMNRVIQDRKE
FRNPSIYDKLISFCDINEFGTNYPPEIYDPLQWGEESYYESLAAVQKTEM
VKRQKDRKDMDKVEQATALARKVEEEAKKRKSKWDQPAPSSTVVKTTLPA
LTTTVTGTKGTVISAFGSLPKKPAVASFLDH

BO06782.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG2063-PA 325 CG2063-PA 1..325 1..325 1662 100 Plus