Clone Sequence Records
BO06785.3prime Sequence
874 bp (853 high quality bases) assembled on 2005-12-03
> BO06785.3prime
ATGGTCTAGAAAGCTTGCGGTGCGCATCGAGGGATCCCCGGCGGAGTGCT
CGCGATGATGCGGCAGCTTGGGCGGTAGCTTAAAGGGCCGAATGAACTTG
ATGTTCGTCTTGAGGCAATCGGGCAGCAAATTGGGTGGCAGCAGGCAGTG
CAGGAAGAGGTGCGTCAGATAGCCGGTGATGCCCCAGATGCGATAATGGT
CTACAACAAATACTGGACCGCTGTAGCCGCTACGAAACTGTGTGTGCCTG
GTGGCCTTGGGCAGCATTAGCGAAGTGAGCGGCACACTAAACGCCTCCTC
CACCTCCTCCCAGTTGAGACGCAGCTCGGAGAGGCTAAAGTCCGGCACCA
CGCCCACCACTGGCACAATCGACGAGGTCCTCGGCAGCTGTAGCTGCTTG
GCCTCGCCCCACACCTGGATGCGATGGCGCGGTAGGCCGATCTCCTCCTC
TGTTTCGCGCAGCGCACAGTCCACGTAGCTCGAGTCGTGATCATCGCGCC
TTCCGCCCGGAAAGGAGATCTGAAAGCTGTGGCTGCGCAGGTGTCGCGAT
CGTCGGGTGTATAGTAGGGATATTTCATTCGTGCCGCGCTCCTGGCAGAG
GGCGATAAGAACCGCGGATGTCTGCTTTTCCCGGCGACTGGGCGTGAGCG
CCTTGGGACGCGGGAATGCCGGCAGGCTGCGCATCTTCTCCATGCACCTG
CGCTGCGATTCCGGTCCGAGGAGCTGGTCGGCAGTGATCGACTGGTCGAC
ATCCGGCGGTTTCGAGGACGTGGCGGATGCGGCGCTTGAGCAGGAGGTGA
CCAGATGGCGGTTCAAGTGCAACAGTAGCTGCGGCACTGTGCGACTCGCC
TGGGCAATCAGGGACATGTCGACT
BO06785.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-PA | 852 | CG11095-RA | 1..849 | 867..19 | 4245 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:47:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 1121 | CG11095-RA | 76..924 | 867..19 | 4245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:47:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13812112..13812673 | 580..19 | 2810 | 100 | Minus |
X | 23542271 | X | 13811759..13812046 | 867..580 | 1440 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 15:47:03 has no hits.
BO06785.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:28 Download gff for
BO06785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 16..867 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:38 Download gff for
BO06785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 16..867 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:14:41 Download gff for
BO06785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 71..924 | 19..874 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:23:23 Download gff for
BO06785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 71..924 | 19..874 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:23:23 Download gff for
BO06785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13811754..13812045 | 581..874 | 98 | -> | Minus |
X | 13812112..13812673 | 19..580 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:14:41 Download gff for
BO06785.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13705787..13706078 | 581..874 | 98 | -> | Minus |
arm_X | 13706145..13706706 | 19..580 | 100 | | Minus |
BO06785.5prime Sequence
876 bp (846 high quality bases) assembled on 2005-12-03
> BO06785.5prime
GAAGTTATCAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGC
CGCAGCTACTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGC
GCCGCATCCGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCAC
TGCCGACCAGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGA
TGCGCAGCCTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGC
CGGGAAAAGCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGG
CACGAATGAAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCA
GCCACAGCTTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGAC
TCGAGCTACGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCT
ACCGCGCCATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGC
CGAGGACCTCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGC
CTCTCCGAGCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGT
GCCGCTCACTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTC
GTAGCGGCTACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGG
GGCATCACCGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACC
CAATTTGCTGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCT
TTAAGCTACCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGAT
CCCTCGATGCGCACCGCAAGCTTTCT
BO06785.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:48:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-PA | 852 | CG11095-RA | 1..849 | 17..865 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:22:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 1121 | CG11095-RA | 76..924 | 17..865 | 4245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:22:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13812112..13812673 | 304..865 | 2810 | 100 | Plus |
X | 23542271 | X | 13811759..13812046 | 17..304 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:22:31 has no hits.
BO06785.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:29 Download gff for
BO06785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 17..868 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:39 Download gff for
BO06785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-PA | 1..852 | 17..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:02 Download gff for
BO06785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..924 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:35:14 Download gff for
BO06785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..924 | 17..865 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:35:14 Download gff for
BO06785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13811759..13812045 | 17..303 | 100 | -> | Plus |
X | 13812112..13812673 | 304..865 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:02 Download gff for
BO06785.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13705792..13706078 | 17..303 | 100 | -> | Plus |
arm_X | 13706145..13706706 | 304..865 | 100 | | Plus |
BO06785.complete Sequence
883 bp (883 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630531
> BO06785.complete
GAAGTTATCAGTCGACATGTCCCTGATTGCCCAGGCGAGTCGCACAGTGC
CGCAGCTACTGTTGCACTTGAACCGCCATCTGGTCACCTCCTGCTCAAGC
GCCGCATCCGCCACGTCCTCGAAACCGCCGGATGTCGACCAGTCGATCAC
TGCCGACCAGCTCCTCGGACCGGAATCGCAGCGCAGGTGCATGGAGAAGA
TGCGCAGCCTGCCGGCATTCCCGCGTCCCAAGGCGCTCACGCCCAGTCGC
CGGGAAAAGCAGACATCCGCGGTTCTTATCGCCCTCTGCCAGGAGCGCGG
CACGAATGAAATATCCCTACTATACACCCGACGATCGCGACACCTGCGCA
GCCACAGCTTTCAGATCTCCTTTCCGGGCGGAAGGCGCGATGATCACGAC
TCGAGCTACGTGGACTGTGCGCTGCGCGAAACAGAGGAGGAGATCGGCCT
ACCGCGCCATCGCATCCAGGTGTGGGGCGAGGCCAAGCAGCTACAGCTGC
CGAGGACCTCGTCGATTGTGCCAGTGGTGGGCGTGGTGCCGGACTTTAGC
CTCTCCGAGCTGCGTCTCAACTGGGAGGAGGTGGAGGAGGCGTTTAGTGT
GCCGCTCACTTCGCTAATGCTGCCCAAGGCCACCAGGCACACACAGTTTC
GTAGCGGCTACAGCGGTCCAGTATTTGTTGTAGACCATTATCGCATCTGG
GGCATCACCGGCTATCTGACGCACCTCTTCCTGCACTGCCTGCTGCCACC
CAATTTGCTGCCCGATTGCCTCAAGACGAACATCAAGTTCATTCGGCCCT
TTAAGCTACCGCCCAAGCTGCCGCATCATCGCGAGCACTCCGCCGGGGAT
CCCTCGATGCGCACCGCAAGCTTTCTAGACCAT
BO06785.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:58:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 852 | CG11095-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-RA | 1121 | CG11095-RA | 76..924 | 17..865 | 4245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:58:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13812112..13812673 | 304..865 | 2810 | 100 | Plus |
X | 23542271 | X | 13811759..13812046 | 17..304 | 1440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:58:48 has no hits.
BO06785.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:00 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 1..852 | 17..868 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:05:07 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 61..909 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:01:39 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..924 | 17..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:00 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 61..909 | 17..865 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:11:56 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11095-RA | 76..924 | 17..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:11:56 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13811759..13812045 | 17..303 | 100 | -> | Plus |
X | 13812112..13812673 | 304..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:01:39 Download gff for
BO06785.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13705792..13706078 | 17..303 | 100 | -> | Plus |
arm_X | 13706145..13706706 | 304..867 | 99 | | Plus |
BO06785.pep Sequence
Translation from 16 to 883
> BO06785.pep
MSLIAQASRTVPQLLLHLNRHLVTSCSSAASATSSKPPDVDQSITADQLL
GPESQRRCMEKMRSLPAFPRPKALTPSRREKQTSAVLIALCQERGTNEIS
LLYTRRSRHLRSHSFQISFPGGRRDDHDSSYVDCALRETEEEIGLPRHRI
QVWGEAKQLQLPRTSSIVPVVGVVPDFSLSELRLNWEEVEEAFSVPLTSL
MLPKATRHTQFRSGYSGPVFVVDHYRIWGITGYLTHLFLHCLLPPNLLPD
CLKTNIKFIRPFKLPPKLPHHREHSAGDPSMRTASFLDH
BO06785.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11095-PA | 283 | CG11095-PA | 1..283 | 1..283 | 1484 | 100 | Plus |