Clone Sequence Records
BO06792.3prime Sequence
641 bp (640 high quality bases) assembled on 2005-12-03
> BO06792.3prime
ATGGTCTAGAAAGCTTGCGTACAGTTTCTGCAGATCGTTGAGCGGCTGAT
TCAGGAAGTCGTTGGTCCAGTTTTTGTCCGGATTATCTAGATGGTTGTCA
AAGTCAACCAAATCCCGCATGGCTCCGCGCTTCAGCAGCAGCGACACGCC
TTCCAATGTATCGGACGCCTGTGAGAGCGTAAACTTGGCCTTTGACCACC
TTGCTCCAGAGTCTCCGGGACAGTTGAATACCTGGATGGCGGCTCGGTCG
TGCTGCAGCGTCATCAGTTTGTTGTCCACCACCACAAAGCAGGCGTTCTT
GAAGTTCTCCTGGATCTTGTCAGCTATCTTGGCGGCTGGGGTCTTGTCGA
CCTGGTTGTCGTAGAAGTTCTCCGGTGCTGCGTAGTAGCCTGCGATTACT
AATCCTTCCCGTTCGGCGTGGGCATCGATCAGCATGAGGGCCACCTCCGC
CATGGGGGTGACATACAGGCACTGGTGGAAAAGCGGAATCGCATCCACGA
TTTCCACTTGGGAGCCCTTCGATGTCTTCTCGGCCAGCAAGAGTCCGTTG
ACCGCCTGGTGTGGATACTTGGCCGCGTGGAATATCAACTTGGCGTACGC
CCGCTCCGAGACCTTGTAGTCGCACATGTCGACTGATAACT
BO06792.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-PA | 612 | CG3501-RA | 1..609 | 627..19 | 3045 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:44:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-RA | 888 | CG3501-RA | 92..700 | 627..19 | 3045 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:44:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22881510..22881921 | 19..430 | 2060 | 100 | Plus |
| 2R | 25286936 | 2R | 22882402..22882599 | 430..627 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:44:37 has no hits.
BO06792.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:42 Download gff for
BO06792.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-PA | 1..612 | 18..627 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:57 Download gff for
BO06792.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-PA | 1..612 | 18..627 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:40:45 Download gff for
BO06792.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 87..700 | 19..634 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:42:26 Download gff for
BO06792.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 87..700 | 19..634 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:42:26 Download gff for
BO06792.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22881510..22881920 | 19..429 | 100 | <- | Plus |
| 2R | 22882402..22882604 | 430..634 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:40:45 Download gff for
BO06792.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18769033..18769443 | 19..429 | 100 | <- | Plus |
| arm_2R | 18769925..18770127 | 430..634 | 98 | | Plus |
BO06792.5prime Sequence
641 bp (640 high quality bases) assembled on 2005-12-03
> BO06792.5prime
GAAGTTATCAGTCGACATGTGCGACTACAAGGTCTCGGAGCGGGCGTACG
CCAAGTTGATATTCCACGCGGCCAAGTATCCACACCAGGCGGTCAACGGA
CTCTTGCTGGCCGAGAAGACATCGAAGGGCTCCCAAGTGGAAATCGTGGA
TGCGATTCCGCTTTTCCACCAGTGCCTGTATGTCACCCCCATGGCGGAGG
TGGCCCTCATGCTGATCGATGCCCACGCCGAACGGGAAGGATTAGTAATC
GCAGGCTACTACGCAGCACCGGAGAACTTCTACGACAACCAGGTCGACAA
GACCCCAGCCGCCAAGATAGCTGACAAGATCCAGGAGAACTTCAAGAACG
CCTGCTTTGTGGTGGTGGACAACAAACTGATGACGCTGCAGCACGACCGA
GCCGCCATCCAGGTATTCAACTGTCCCGGAGACTCTGGAGCAAGGTGGTC
AAAGGCCAAGTTTACGCTCTCACAGGCGTCCGATACATTGGAAGGCGTGT
CGCTGCTGCTGAAGCGCGGAGCCATGCGGGATTTGGTTGACTTTGACAAC
CATCTAGATAATCCGGACAAAAACTGGACCAACGACTTCCTGAATCAGCC
GCTCAACGATCTGCAGAAACTGTACGCAAGCTTTCTAGACC
BO06792.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-PA | 612 | CG3501-RA | 1..609 | 17..625 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:23:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-RA | 888 | CG3501-RA | 92..700 | 17..625 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22881510..22881921 | 625..214 | 2060 | 100 | Minus |
| 2R | 25286936 | 2R | 22882402..22882599 | 214..17 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:23:09 has no hits.
BO06792.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 02:59:44 Download gff for
BO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-PA | 1..612 | 17..626 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:35:58 Download gff for
BO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-PA | 1..612 | 17..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:06 Download gff for
BO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 87..700 | 10..625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:39:29 Download gff for
BO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 87..700 | 10..625 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:39:29 Download gff for
BO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22881510..22881920 | 215..625 | 100 | <- | Minus |
| 2R | 22882402..22882604 | 10..214 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:06 Download gff for
BO06792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18769033..18769443 | 215..625 | 100 | <- | Minus |
| arm_2R | 18769925..18770127 | 10..214 | 98 | | Minus |
BO06792.complete Sequence
643 bp (643 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630534
> BO06792.complete
GAAGTTATCAGTCGACATGTGCGACTACAAGGTCTCGGAGCGGGCGTACG
CCAAGTTGATATTCCACGCGGCCAAGTATCCACACCAGGCGGTCAACGGA
CTCTTGCTGGCCGAGAAGACATCGAAGGGCTCCCAAGTGGAAATCGTGGA
TGCGATTCCGCTTTTCCACCAGTGCCTGTATGTCACCCCCATGGCGGAGG
TGGCCCTCATGCTGATCGATGCCCACGCCGAACGGGAAGGATTAGTAATC
GCAGGCTACTACGCAGCACCGGAGAACTTCTACGACAACCAGGTCGACAA
GACCCCAGCCGCCAAGATAGCTGACAAGATCCAGGAGAACTTCAAGAACG
CCTGCTTTGTGGTGGTGGACAACAAACTGATGACGCTGCAGCACGACCGA
GCCGCCATCCAGGTATTCAACTGTCCCGGAGACTCTGGAGCAAGGTGGTC
AAAGGCCAAGTTTACGCTCTCACAGGCGTCCGATACATTGGAAGGCGTGT
CGCTGCTGCTGAAGCGCGGAGCCATGCGGGATTTGGTTGACTTTGACAAC
CATCTAGATAATCCGGACAAAAACTGGACCAACGACTTCCTGAATCAGCC
GCTCAACGATCTGCAGAAACTGTACGCAAGCTTTCTAGACCAT
BO06792.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:34:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-RA | 612 | CG3501-PA | 1..609 | 17..625 | 3045 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:34:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-RA | 888 | CG3501-RA | 92..700 | 17..625 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:34:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22881510..22881921 | 625..214 | 2060 | 100 | Minus |
| 2R | 25286936 | 2R | 22882402..22882599 | 214..17 | 990 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 16:34:47 has no hits.
BO06792.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:05 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 1..612 | 17..626 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:19 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 84..697 | 10..625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:11 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 92..700 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:05 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 84..697 | 10..625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:21:46 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3501-RA | 92..700 | 17..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:21:46 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22882402..22882599 | 17..214 | 100 | | Minus |
| 2R | 22881508..22881920 | 215..627 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:11 Download gff for
BO06792.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18769031..18769443 | 215..627 | 99 | <- | Minus |
| arm_2R | 18769925..18770122 | 17..214 | 100 | | Minus |
BO06792.pep Sequence
Translation from 16 to 643
> BO06792.pep
MCDYKVSERAYAKLIFHAAKYPHQAVNGLLLAEKTSKGSQVEIVDAIPLF
HQCLYVTPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAK
IADKIQENFKNACFVVVDNKLMTLQHDRAAIQVFNCPGDSGARWSKAKFT
LSQASDTLEGVSLLLKRGAMRDLVDFDNHLDNPDKNWTNDFLNQPLNDLQ
KLYASFLDH
BO06792.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3501-PA | 203 | CG3501-PA | 1..203 | 1..203 | 1064 | 100 | Plus |
