Clone Sequence Records
BO06805.3prime Sequence
752 bp (751 high quality bases) assembled on 2005-12-03
> BO06805.3prime
ATGGTCTAGAAAGCTTGCTAACTGGATCTGGGCAGGACGCTTGCGTTGGA
ATATAGAGTCGATGGTGGAGAAGACGTCGCTGGACTTCTTGGCGGCGTCC
ACCTTGAAGTGCAGACCCCTCAGGCCGTAGTAGTCGACCAGCGGCTTTGT
CTGCTTGTGATATGCTTCCAGTCGCTTCTTCAGAGCCTCGGCGTTGTCAT
CGCTGCGACGGATTAGGGGCTCTCCAGTGACATCGTCCGTCATTGGCTTC
TTTGGAGGGGCAAACTCTTCGTGATACGAACGCCCGCTGGCCTGGTGGAT
CAAGCGGCCAGTGATGCGCCTCACCAACAGACTGTCGTCGATGGCAAACT
CGATGACAGCATCCAAGTTGGTTTTCCTCTTGTCCAGCAATGTGTCGAGC
TTCTCAGCTTGAACGACAGTCCTGGGGAATCCGTCCAGGAGGAATCCGTT
CTTGCACTCGGGCTTGTCCAGGTTGGAGTCGATCATGTCCACGACCAGGT
CGTCGGAGACCAGTTTGCCGGCATCCATGACCTTCTTCAACTCGGCTCCC
AGCTTCGAACCGGATGAAATCTCCGCCCGCAGCATGTCGCCGGTCGACAG
GTGGCACACGCAGAACTTCTCCTTCAGCAGGGGAGCCTGCGTTCCTTTGC
CGGAACCCGGCGGCCCCAGGAGAATGGCGTTGATCCCGATGTTCTCAGGC
TCATATCGCTCCACTGGTACTGCTGCATTCGGCGCCATGTCGACTGATAA
CT
BO06805.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3140-PA | 723 | Adk2-RA | 1..720 | 738..19 | 3575 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:01:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 1065 | CG3140-RA | 113..832 | 738..19 | 3585 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:01:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24024897..24025136 | 639..400 | 1185 | 99.6 | Minus |
2R | 25286936 | 2R | 24025432..24025644 | 231..19 | 1065 | 100 | Minus |
2R | 25286936 | 2R | 24025198..24025369 | 401..230 | 860 | 100 | Minus |
2R | 25286936 | 2R | 24024319..24024421 | 738..636 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:01:51 has no hits.
BO06805.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:00 Download gff for
BO06805.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-PA | 1..723 | 16..738 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:36:18 Download gff for
BO06805.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3140-PA | 1..723 | 16..738 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:45:26 Download gff for
BO06805.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..832 | 19..745 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:48:10 Download gff for
BO06805.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..832 | 19..745 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:48:10 Download gff for
BO06805.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24025432..24025644 | 19..231 | 100 | | Minus |
2R | 24024311..24024420 | 637..745 | 97 | -> | Minus |
2R | 24024900..24025136 | 400..636 | 99 | -> | Minus |
2R | 24025200..24025367 | 232..399 | 100 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:45:26 Download gff for
BO06805.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19911834..19911943 | 637..745 | 97 | -> | Minus |
arm_2R | 19912423..19912659 | 400..636 | 99 | -> | Minus |
arm_2R | 19912723..19912890 | 232..399 | 100 | -> | Minus |
arm_2R | 19912955..19913167 | 19..231 | 100 | | Minus |
BO06805.5prime Sequence
752 bp (751 high quality bases) assembled on 2005-12-03
> BO06805.5prime
GAAGTTATCAGTCGACATGGCGCCGAATGCAGCAGTACCAGTGGAGCGAT
ATGAGCCTGAGAACATCGGGATCAACGCCATTCTCCTGGGGCCGCCGGGT
TCCGGCAAAGGAACGCAGGCTCCCCTGCTGAAGGAGAAGTTCTGCGTGTG
CCACCTGTCGACCGGCGACATGCTGCGGGCGGAGATTTCATCCGGTTCGA
AGCTGGGAGCCGAGTTGAAGAAGGTCATGGATGCCGGCAAACTGGTCTCC
GACGACCTGGTCGTGGACATGATCGACTCCAACCTGGACAAGCCCGAGTG
CAAGAACGGATTCCTCCTGGACGGATTCCCCAGGACTGTCGTTCAAGCTG
AGAAGCTCGACACATTGCTGGACAAGAGGAAAACCAACTTGGATGCTGTC
ATCGAGTTTGCCATCGACGACAGTCTGTTGGTGAGGCGCATCACTGGCCG
CTTGATCCACCAGGCCAGCGGGCGTTCGTATCACGAAGAGTTTGCCCCTC
CAAAGAAGCCAATGACGGACGATGTCACTGGAGAGCCCCTAATCCGTCGC
AGCGATGACAACGCCGAGGCTCTGAAGAAGCGACTGGAAGCATATCACAA
GCAGACAAAGCCGCTGGTCGACTACTACGGCCTGAGGGGTCTGCACTTCA
AGGTGGACGCCGCCAAGAAGTCCAGCGACGTCTTCTCCACCATCGACTCT
ATATTCCAACGCAAGCGTCCTGCCCAGATCCAGTTAGCAAGCTTTCTAGA
CC
BO06805.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3140-PA | 723 | Adk2-RA | 1..720 | 17..736 | 3575 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:26:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 1065 | CG3140-RA | 113..832 | 17..736 | 3585 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:25:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24024897..24025136 | 116..355 | 1185 | 99.6 | Plus |
2R | 25286936 | 2R | 24025432..24025644 | 524..736 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 24025198..24025369 | 354..525 | 860 | 100 | Plus |
2R | 25286936 | 2R | 24024319..24024421 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 23:25:57 has no hits.
BO06805.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:02 Download gff for
BO06805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-PA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:36:20 Download gff for
BO06805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3140-PA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:43:29 Download gff for
BO06805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..832 | 10..736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:39:37 Download gff for
BO06805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 105..832 | 10..736 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:39:37 Download gff for
BO06805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24025432..24025644 | 524..736 | 100 | | Plus |
2R | 24025200..24025367 | 356..523 | 100 | -> | Plus |
2R | 24024311..24024420 | 10..118 | 97 | -> | Plus |
2R | 24024900..24025136 | 119..355 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:43:29 Download gff for
BO06805.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19912723..19912890 | 356..523 | 100 | -> | Plus |
arm_2R | 19911834..19911943 | 10..118 | 97 | -> | Plus |
arm_2R | 19912423..19912659 | 119..355 | 99 | -> | Plus |
arm_2R | 19912955..19913167 | 524..736 | 100 | | Plus |
BO06805.complete Sequence
754 bp (754 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630538
> BO06805.complete
GAAGTTATCAGTCGACATGGCGCCGAATGCAGCAGTACCAGTGGAGCGAT
ATGAGCCTGAGAACATCGGGATCAACGCCATTCTCCTGGGGCCGCCGGGT
TCCGGCAAAGGAACGCAGGCTCCCCTGCTGAAGGAGAAGTTCTGCGTGTG
CCACCTGTCGACCGGCGACATGCTGCGGGCGGAGATTTCATCCGGTTCGA
AGCTGGGAGCCGAGTTGAAGAAGGTCATGGATGCCGGCAAACTGGTCTCC
GACGACCTGGTCGTGGACATGATCGACTCCAACCTGGACAAGCCCGAGTG
CAAGAACGGATTCCTCCTGGACGGATTCCCCAGGACTGTCGTTCAAGCTG
AGAAGCTCGACACATTGCTGGACAAGAGGAAAACCAACTTGGATGCTGTC
ATCGAGTTTGCCATCGACGACAGTCTGTTGGTGAGGCGCATCACTGGCCG
CTTGATCCACCAGGCCAGCGGGCGTTCGTATCACGAAGAGTTTGCCCCTC
CAAAGAAGCCAATGACGGACGATGTCACTGGAGAGCCCCTAATCCGTCGC
AGCGATGACAACGCCGAGGCTCTGAAGAAGCGACTGGAAGCATATCACAA
GCAGACAAAGCCGCTGGTCGACTACTACGGCCTGAGGGGTCTGCACTTCA
AGGTGGACGCCGCCAAGAAGTCCAGCGACGTCTTCTCCACCATCGACTCT
ATATTCCAACGCAAGCGTCCTGCCCAGATCCAGTTAGCAAGCTTTCTAGA
CCAT
BO06805.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:25:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 723 | CG3140-PA | 1..720 | 17..736 | 3585 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-RA | 1065 | CG3140-RA | 113..832 | 17..736 | 3585 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:25:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24024897..24025136 | 116..355 | 1185 | 99.6 | Plus |
2R | 25286936 | 2R | 24025432..24025644 | 524..736 | 1065 | 100 | Plus |
2R | 25286936 | 2R | 24025198..24025369 | 354..525 | 860 | 100 | Plus |
2R | 25286936 | 2R | 24024319..24024421 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:25:47 has no hits.
BO06805.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:21:10 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 1..723 | 17..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:26 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 114..841 | 10..736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:57:44 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 113..832 | 17..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:21:10 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 114..841 | 10..736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:00:44 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Adk2-RA | 113..832 | 17..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:00:44 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24024319..24024420 | 17..118 | 100 | -> | Plus |
2R | 24024900..24025136 | 119..355 | 99 | -> | Plus |
2R | 24025200..24025367 | 356..523 | 100 | -> | Plus |
2R | 24025432..24025644 | 524..738 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:57:44 Download gff for
BO06805.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19912955..19913167 | 524..738 | 99 | | Plus |
arm_2R | 19911842..19911943 | 17..118 | 100 | -> | Plus |
arm_2R | 19912423..19912659 | 119..355 | 99 | -> | Plus |
arm_2R | 19912723..19912890 | 356..523 | 100 | -> | Plus |
BO06805.pep Sequence
Translation from 16 to 754
> BO06805.pep
MAPNAAVPVERYEPENIGINAILLGPPGSGKGTQAPLLKEKFCVCHLSTG
DMLRAEISSGSKLGAELKKVMDAGKLVSDDLVVDMIDSNLDKPECKNGFL
LDGFPRTVVQAEKLDTLLDKRKTNLDAVIEFAIDDSLLVRRITGRLIHQA
SGRSYHEEFAPPKKPMTDDVTGEPLIRRSDDNAEALKKRLEAYHKQTKPL
VDYYGLRGLHFKVDAAKKSSDVFSTIDSIFQRKRPAQIQLASFLDH
BO06805.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Adk2-PA | 240 | CG3140-PA | 1..240 | 1..240 | 1228 | 100 | Plus |
Adk3-PD | 216 | CG6612-PD | 8..190 | 21..209 | 345 | 39.2 | Plus |
Adk3-PC | 216 | CG6612-PC | 8..190 | 21..209 | 345 | 39.2 | Plus |
Adk3-PA | 216 | CG6612-PA | 8..190 | 21..209 | 345 | 39.2 | Plus |
Adk3-PB | 216 | CG6612-PB | 8..190 | 21..209 | 345 | 39.2 | Plus |