Clone BO06815 Report

Search the DGRC for BO06815

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:68
Well:15
Vector:pDNR-Dual
Associated Gene/Transcriptyip7-RA
Protein status:BO06815.pep: validated full length
Sequenced Size:844

Clone Sequence Records

BO06815.3prime Sequence

815 bp (805 high quality bases) assembled on 2005-12-03

> BO06815.3prime
ATGGTCTAGAAAGCTTGCGATACCGGAAGTTTCCTTGATCCAATCGCGAT
AGTAAGTGATACGGGTGAAAGCAGCTGGTGCGCCAGACTCGCAACCATCA
GCGGATCCAAAGGAGGTGGCACCGATGAGGACACCATCGAGAGCCAATGG
GCCGCCGGAATCACCCTGGCAGGTGGAGGCCTTGTTGGTGGTGTCAACGC
AGAGGACCCTGCTGGTCACGATCAGGCTTCCGAAGGTTTCCTGGCATTTG
GAGTTGGAGATGATGGTAAGGTCCACGTACTGCAGATCGCGAGACACGGC
GGTGGCTTGGTCGGAGGTGAGACCCCATCCGGAGGCAACAGCGGTCTTTC
CCTCGTAGGTGGAGTAGCTGTTGGAGACGGCGGGCAGGCTGATCTTGTTC
ACGGTAGCCGAGAAGGACACGGACGAAGTCTGGATCAGGGAGATGTCGTT
GCGGATGGTCAAAGCCAGGTAGCTTTCGTGCTGCCTAAACTTTGAGCTGC
TGACGACTTGGGTGAACTCGGGGCTAGTACGGACAGTGGCACCGTAGTAG
ATGGTCACGGAGGCGGCACCGTCGGTACAGTGAGCAGCAGTCAGCACCCA
CTCGTTTCCGATGATGGAGCCACCGCACCACCAACTGCCAGCAGAGCTGG
AGAAACTAAGTCCCACCTGGTAGGGGAACTGGCCGGCAACGGCGTCCTTG
CCGTTGGTGATGCGACCGGTGATGGATGGGGTCGAGACCCTGTCACGGGG
ATGTACAGGGGCAATATTGGGCAGGAGCCCAGCGGAGGCGGAGGCCAGAG
CCAGAACCAAAACTA

BO06815.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG6457-PA 813 yip7-RA 14..810 815..19 3985 100 Minus
CG6467-PA 816 Jon65Aiv-RA 138..165 685..658 140 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:02:43
Subject Length Description Subject Range Query Range Score Percent Strand
yip7-RA 904 CG6457-RA 41..837 815..19 3985 100 Minus
CG10477-RB 1039 CG10477-RB 118..512 717..323 475 75.3 Minus
CG10477-RA 1361 CG10477-RA 118..512 717..323 475 75.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:02:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6035558..6036108 569..19 2755 100 Minus
3L 28110227 3L 6035256..6035502 815..569 1235 100 Minus
3L 28110227 3L 6050888..6051027 717..578 355 83.6 Minus
2L 23513712 2L 4954803..4954940 496..633 270 79.7 Plus
3L 28110227 3L 6034048..6034178 323..453 265 80.2 Plus
3L 28110227 3L 6034351..6034494 574..717 240 77.8 Plus
2L 23513712 2L 4950474..4950571 536..633 220 81.6 Plus
2L 23513712 2L 4952816..4952910 539..633 220 82.1 Plus
3R 32079331 3R 29922422..29922518 633..537 200 80.4 Minus
Blast to na_te.dros performed on 2015-02-11 23:02:39 has no hits.

BO06815.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:22 Download gff for BO06815.3prime
Subject Subject Range Query Range Percent Splice Strand
yip7-PA 15..813 15..814 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:36:45 Download gff for BO06815.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6457-PA 15..813 15..814 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:45:31 Download gff for BO06815.3prime
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 42..841 14..814 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:48:17 Download gff for BO06815.3prime
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 42..841 14..814 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:48:17 Download gff for BO06815.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 6035257..6035502 569..814 100 -> Minus
3L 6035559..6036112 14..568 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:45:31 Download gff for BO06815.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6028357..6028602 569..814 100 -> Minus
arm_3L 6028659..6029212 14..568 99   Minus

BO06815.5prime Sequence

842 bp (633 high quality bases) assembled on 2005-12-03

> BO06815.5prime
GAAGTTATCAGTCGACATGAAGGTTTTCGTAGTTTTGGTTCTGGCTCTGG
CCTCCGCCTCCGCTGGGCTCCTGCCCAATATTGCCCCTGTACATCCCCGT
GACAGGGTCTCGACCCCATCCATCACCGGTCGCATCACCAACGGCAAGGA
CGCCGTTGCCGGCCAGTTCCCCTACCAGGTGGGACTTAGTTTCTCCAGCT
CTGCTGGCAGTTGGTGGTGCGGTGGCTCCATCATCGGAAACGAGTGGGTG
CTGACTGCTGCTCACTGTACCGACGGTGCCGCCTCCGTGACCATCTACTA
CGGTGCCACTGTCCGTACTAGCCCCGAGTTCACCCAAGTCGTCAGCAGCT
CAAAGTTTAGGCAGCACGAAAGCTACCTGGCTTTGACCATCCGCAACGAC
ATCTCCCTGATCCAGACTTCGTCCGTGTCCTTCTCGGCTACCGTGAACAA
GATCAGCCTGCCCGCCGTCTCCAACAGCTACTCCACCTACGAGGGAAAGA
CCGCTGTTGCCTCCGGATGGGGTCTCACCTCCGACCAAGCCACCGCCGTG
TCTCGCGATCTGCAGTACGTGGACCTTACCATCATCTCCAACTCCAAATG
CCAGGAAACCTTCGGAAGCCTGATCGTGACCAGCAGGGTCCTCTGCGTTG
ACACCACCAACAAGGCCTCCACCTGCCAGGGTGATTCCGGCGGCCCATTG
GCTCTCGATGGTGTCCTCATCGGTGCCACCTCCTTTGGATCCGCTGATGG
TTGCGAGTCTGGCGCACCAGCTGCTTTCACCCGTATCACTTACTATCGCG
ATTGGATCAAGGAAACTTCCGGTATCGCAAGCTTTCTAGACC

BO06815.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6457-PA 813 yip7-RA 1..810 17..826 4050 100 Plus
CG6467-PA 816 Jon65Aiv-RA 138..165 160..187 140 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:22:57
Subject Length Description Subject Range Query Range Score Percent Strand
yip7-RA 904 CG6457-RA 27..837 16..826 4055 100 Plus
CG10477-RB 1039 CG10477-RB 118..512 128..522 475 75.3 Plus
CG10477-RA 1361 CG10477-RA 118..512 128..522 475 75.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:22:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6035558..6036108 276..826 2755 100 Plus
3L 28110227 3L 6035242..6035502 16..276 1305 100 Plus
3L 28110227 3L 6050888..6051027 128..267 355 83.6 Plus
2L 23513712 2L 4954803..4954940 349..212 270 79.7 Minus
3L 28110227 3L 6034048..6034178 522..392 265 80.2 Minus
3L 28110227 3L 6034351..6034494 271..128 240 77.8 Minus
2L 23513712 2L 4950474..4950571 309..212 220 81.6 Minus
2L 23513712 2L 4952816..4952910 306..212 220 82.1 Minus
3R 32079331 3R 29922422..29922518 212..308 200 80.4 Plus
Blast to na_te.dros performed on 2015-02-13 05:22:56 has no hits.

BO06815.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:23 Download gff for BO06815.5prime
Subject Subject Range Query Range Percent Splice Strand
yip7-PA 1..813 17..830 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:36:47 Download gff for BO06815.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6457-PA 1..813 17..830 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:28 Download gff for BO06815.5prime
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 21..841 9..831 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:52:57 Download gff for BO06815.5prime
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 21..841 9..831 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:52:57 Download gff for BO06815.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6035236..6035502 9..276 98 -> Plus
3L 6035559..6036112 277..831 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:28 Download gff for BO06815.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6028336..6028602 9..276 98 -> Plus
arm_3L 6028659..6029212 277..831 99   Plus

BO06815.complete Sequence

844 bp (844 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630543

> BO06815.complete
GAAGTTATCAGTCGACATGAAGGTTTTCGTAGTTTTGGTTCTGGCTCTGG
CCTCCGCCTCCGCTGGGCTCCTGCCCAATATTGCCCCTGTACATCCCCGT
GACAGGGTCTCGACCCCATCCATCACCGGTCGCATCACCAACGGCAAGGA
CGCCGTTGCCGGCCAGTTCCCCTACCAGGTGGGACTTAGTTTCTCCAGCT
CTGCTGGCAGTTGGTGGTGCGGTGGCTCCATCATCGGAAACGAGTGGGTG
CTGACTGCTGCTCACTGTACCGACGGTGCCGCCTCCGTGACCATCTACTA
CGGTGCCACTGTCCGTACTAGCCCCGAGTTCACCCAAGTCGTCAGCAGCT
CAAAGTTTAGGCAGCACGAAAGCTACCTGGCTTTGACCATCCGCAACGAC
ATCTCCCTGATCCAGACTTCGTCCGTGTCCTTCTCGGCTACCGTGAACAA
GATCAGCCTGCCCGCCGTCTCCAACAGCTACTCCACCTACGAGGGAAAGA
CCGCTGTTGCCTCCGGATGGGGTCTCACCTCCGACCAAGCCACCGCCGTG
TCTCGCGATCTGCAGTACGTGGACCTTACCATCATCTCCAACTCCAAATG
CCAGGAAACCTTCGGAAGCCTGATCGTGACCAGCAGGGTCCTCTGCGTTG
ACACCACCAACAAGGCCTCCACCTGCCAGGGTGATTCCGGCGGCCCATTG
GCTCTCGATGGTGTCCTCATCGGTGCCACCTCCTTTGGATCCGCTGATGG
TTGCGAGTCTGGCGCACCAGCTGCTTTCACCCGTATCACTTACTATCGCG
ATTGGATCAAGGAAACTTCCGGTATCGCAAGCTTTCTAGACCAT

BO06815.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
yip7-RA 813 CG6457-PA 1..810 17..826 4050 100 Plus
CG10477-RB 819 CG10477-PB 112..506 128..522 475 74.7 Plus
CG10477-RA 819 CG10477-PA 112..506 128..522 475 74.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
yip7-RA 904 CG6457-RA 27..837 16..826 4055 100 Plus
CG10477-RB 1039 CG10477-RB 118..512 128..522 475 74.7 Plus
CG10477-RA 1361 CG10477-RA 118..512 128..522 475 74.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:10:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6035558..6036108 276..826 2755 100 Plus
3L 28110227 3L 6035242..6035502 16..276 1305 100 Plus
3L 28110227 3L 6050888..6051027 128..267 355 83.6 Plus
2L 23513712 2L 4954803..4954940 349..212 270 79.7 Minus
3L 28110227 3L 6034048..6034178 522..392 265 80.2 Minus
3L 28110227 3L 6034351..6034494 271..128 240 77.8 Minus
2L 23513712 2L 4950474..4950571 309..212 220 81.6 Minus
2L 23513712 2L 4952816..4952910 306..212 220 82.1 Minus
3R 32079331 3R 29922422..29922518 212..308 200 80.4 Plus
3R 32079331 3R 30489174..30489270 212..308 200 80.4 Plus
3R 32079331 3R 29924311..29924407 308..212 185 79.4 Minus
3R 32079331 3R 30487621..30487717 308..212 185 79.4 Minus
Blast to na_te.dros performed on 2014-11-26 15:10:39 has no hits.

BO06815.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:56 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 1..813 17..830 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:44:06 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 7..827 9..831 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:06 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 28..837 17..828 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:56 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 7..827 9..831 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:54 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
yip7-RA 28..837 17..828 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:54 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6035243..6035502 17..276 100 -> Plus
3L 6035559..6036108 277..828 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:06 Download gff for BO06815.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6028343..6028602 17..276 100 -> Plus
arm_3L 6028659..6029208 277..828 99   Plus

BO06815.pep Sequence

Translation from 16 to 844

> BO06815.pep
MKVFVVLVLALASASAGLLPNIAPVHPRDRVSTPSITGRITNGKDAVAGQ
FPYQVGLSFSSSAGSWWCGGSIIGNEWVLTAAHCTDGAASVTIYYGATVR
TSPEFTQVVSSSKFRQHESYLALTIRNDISLIQTSSVSFSATVNKISLPA
VSNSYSTYEGKTAVASGWGLTSDQATAVSRDLQYVDLTIISNSKCQETFG
SLIVTSRVLCVDTTNKASTCQGDSGGPLALDGVLIGATSFGSADGCESGA
PAAFTRITYYRDWIKETSGIASFLDH

BO06815.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:25:51
Subject Length Description Subject Range Query Range Score Percent Strand
yip7-PA 270 CG6457-PA 1..270 1..270 1378 100 Plus
CG10477-PB 272 CG10477-PB 1..270 1..270 950 66.7 Plus
CG10477-PA 272 CG10477-PA 1..270 1..270 950 66.7 Plus
Jon65Aiii-PA 274 CG6483-PA 1..273 1..271 923 63 Plus
Jon65Aiv-PA 271 CG6467-PA 1..271 1..270 736 55.3 Plus