Clone BO06822 Report

Search the DGRC for BO06822

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:68
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptGLaz-RA
Protein status:BO06822.pep: Imported from assembly
Sequenced Size:670

Clone Sequence Records

BO06822.3prime Sequence

668 bp (667 high quality bases) assembled on 2005-12-03

> BO06822.3prime
ATGGTCTAGAAAGCTTGCCAGCGCCTCGGGGCATTGTTTGTTTTTGCTGA
TGATGAGCCTTTCCGGATCCAGAGAGAGCCGCTTCAACACGTCGTACACT
TTGGATCGGATATCCACCTCGAAGTCCCGATCACGTCCAAGAATCCAGAT
CTGATCGGAGTGACCCAGTGAGCCAATGCTGCCGCAGGACCACAAGATGG
CGAAGTTCTCGTAGTCTGTGTATAGCACCTGGTACTTTCCGGAACCTGGC
AGTAGTCGGGCAATCACGTCCGGAAATCGGGTGGTAAACTTAAAATCCAT
GATGGAGGATCGGCTGTTTTCTGGTGTTGCATAGCCAATGTTCACATTCG
GATTACCAGTTATGCGATTAATGTTTTTAATGGCCACAGCCAGCTTGAAA
TTGGAAAACTTCGATTGTTCGCCCTTGTTGTACGGCTCAAACTGAAAGGT
GGTGCATCCGGAGGCGATTTCCGGAAGGTAAAAAGAGCGCTCTACCTCGT
ACCAGTGTCCAAGGACCCGACTCATGTTAAACTTTGGCATCGATGGATAA
TTCGGGCAACGTCCAAATCCGTAGGCATCTGTCCCAGCAAATGTCACTAA
TAGCACTCCGGACAACAGCCAAACCCTCGAGCCAAGTGGCTGACCACTCA
TCATGTCGACTGATAACT

BO06822.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG4604-PA 639 GLaz-RA 1..636 654..19 3155 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
GLaz-RF 1101 CG4604-RF 204..840 655..19 3170 99.8 Minus
GLaz-RE 1084 CG4604-RE 282..918 655..19 3170 99.8 Minus
GLaz-RD 1023 CG4604-RD 221..857 655..19 3170 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:45:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13164220..13164491 19..290 1360 100 Plus
2R 25286936 2R 13164677..13164832 362..517 780 100 Plus
2R 25286936 2R 13166422..13166562 515..655 690 99.3 Plus
2R 25286936 2R 13164546..13164618 289..361 365 100 Plus
Blast to na_te.dros performed on 2015-02-11 16:45:14 has no hits.

BO06822.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:34 Download gff for BO06822.3prime
Subject Subject Range Query Range Percent Splice Strand
GLaz-PA 1..639 18..654 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:01 Download gff for BO06822.3prime
Subject Subject Range Query Range Percent Splice Strand
CG4604-PA 1..639 18..654 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:40:49 Download gff for BO06822.3prime
Subject Subject Range Query Range Percent Splice Strand
GLaz-RD 215..869 8..661 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:43:48 Download gff for BO06822.3prime
Subject Subject Range Query Range Percent Splice Strand
GLaz-RD 215..869 8..661 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:43:48 Download gff for BO06822.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 13164546..13164618 289..361 100 <- Plus
2R 13164677..13164831 362..516 100 <- Plus
2R 13166424..13166568 517..661 97   Plus
2R 13164208..13164489 8..288 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:40:49 Download gff for BO06822.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9052182..9052336 362..516 100 <- Plus
arm_2R 9051713..9051994 8..288 98 <- Plus
arm_2R 9052051..9052123 289..361 100 <- Plus
arm_2R 9053929..9054073 517..661 97   Plus

BO06822.5prime Sequence

668 bp (667 high quality bases) assembled on 2005-12-03

> BO06822.5prime
GAAGTTATCAGTCGACATGATGAGTGGTCAGCCACTTGGCTCGAGGGTTT
GGCTGTTGTCCGGAGTGCTATTAGTGACATTTGCTGGGACAGATGCCTAC
GGATTTGGACGTTGCCCGAATTATCCATCGATGCCAAAGTTTAACATGAG
TCGGGTCCTTGGACACTGGTACGAGGTAGAGCGCTCTTTTTACCTTCCGG
AAATCGCCTCCGGATGCACCACCTTTCAGTTTGAGCCGTACAACAAGGGC
GAACAATCGAAGTTTTCCAATTTCAAGCTGGCTGTGGCCATTAAAAACAT
TAATCGCATAACTGGTAATCCGAATGTGAACATTGGCTATGCAACACCAG
AAAACAGCCGATCCTCCATCATGGATTTTAAGTTTACCACCCGATTTCCG
GACGTGATTGCCCGACTACTGCCAGGTTCCGGAAAGTACCAGGTGCTATA
CACAGACTACGAGAACTTCGCCATCTTGTGGTCCTGCGGCAGCATTGGCT
CACTGGGTCACTCCGATCAGATCTGGATTCTTGGACGTGATCGGGACTTC
GAGGTGGATATCCGATCCAAAGTGTACGACGTGTTGAAGCGGCTCTCTCT
GGATCCGGAAAGGCTCATCATCAGCAAAAACAAACAATGCCCCGAGGCGC
TGGCAAGCTTTCTAGACC

BO06822.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG4604-PA 639 GLaz-RA 1..636 17..652 3155 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:23:03
Subject Length Description Subject Range Query Range Score Percent Strand
GLaz-RF 1101 CG4604-RF 204..840 16..652 3170 99.8 Plus
GLaz-RE 1084 CG4604-RE 282..918 16..652 3170 99.8 Plus
GLaz-RD 1023 CG4604-RD 221..857 16..652 3170 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13164220..13164491 652..381 1360 100 Minus
2R 25286936 2R 13164677..13164832 309..154 780 100 Minus
2R 25286936 2R 13166422..13166562 156..16 690 99.3 Minus
2R 25286936 2R 13164546..13164618 382..310 365 100 Minus
Blast to na_te.dros performed on 2015-02-13 05:23:02 has no hits.

BO06822.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:35 Download gff for BO06822.5prime
Subject Subject Range Query Range Percent Splice Strand
GLaz-PA 1..639 17..653 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:02 Download gff for BO06822.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4604-PA 1..639 17..653 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:29 Download gff for BO06822.5prime
Subject Subject Range Query Range Percent Splice Strand
GLaz-RD 215..869 10..663 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:53:10 Download gff for BO06822.5prime
Subject Subject Range Query Range Percent Splice Strand
GLaz-RD 215..869 10..663 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:53:10 Download gff for BO06822.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 13164208..13164489 383..663 98 <- Minus
2R 13164546..13164618 310..382 100 <- Minus
2R 13164677..13164831 155..309 100 <- Minus
2R 13166424..13166568 10..154 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:29 Download gff for BO06822.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9051713..9051994 383..663 98 <- Minus
arm_2R 9052051..9052123 310..382 100 <- Minus
arm_2R 9052182..9052336 155..309 100 <- Minus
arm_2R 9053929..9054073 10..154 97   Minus

BO06822.complete Sequence

670 bp assembled on 2011-06-28

GenBank Submission: KX796180

> BO06822.complete
GAAGTTATCAGTCGACATGATGAGTGGTCAGCCACTTGGCTCGAGGGTTT
GGCTGTTGTCCGGAGTGCTATTAGTGACATTTGCTGGGACAGATGCCTAC
GGATTTGGACGTTGCCCGAATTATCCATCGATGCCAAAGTTTAACATGAG
TCGGGTCCTTGGACACTGGTACGAGGTAGAGCGCTCTTTTTACCTTCCGG
AAATCGCCTCCGGATGCACCACCTTTCAGTTTGAGCCGTACAACAAGGGC
GAACAATCGAAGTTTTCCAATTTCAAGCTGGCTGTGGCCATTAAAAACAT
TAATCGCATAACTGGTAATCCGAATGTGAACATTGGCTATGCAACACCAG
AAAACAGCCGATCCTCCATCATGGATTTTAAGTTTACCACCCGATTTCCG
GACGTGATTGCCCGACTACTGCCAGGTTCCGGAAAGTACCAGGTGCTATA
CACAGACTACGAGAACTTCGCCATCTTGTGGTCCTGCGGCAGCATTGGCT
CACTGGGTCACTCCGATCAGATCTGGATTCTTGGACGTGATCGGGACTTC
GAGGTGGATATCCGATCCAAAGTGTACGACGTGTTGAAGCGGCTCTCTCT
GGATCCGGAAAGGCTCATCATCAGCAAAAACAAACAATGCCCCGAGGCGC
TGGCAAGCTTTCTAGACCAT

BO06822.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
GLaz-RF 639 CG4604-PF 1..636 17..652 3165 99.8 Plus
GLaz-RE 639 CG4604-PE 1..636 17..652 3165 99.8 Plus
GLaz-RD 639 CG4604-PD 1..636 17..652 3165 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:17
Subject Length Description Subject Range Query Range Score Percent Strand
GLaz-RF 1101 CG4604-RF 204..840 16..652 3170 99.8 Plus
GLaz-RE 1084 CG4604-RE 282..918 16..652 3170 99.8 Plus
GLaz-RD 1023 CG4604-RD 221..857 16..652 3170 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13164220..13164491 652..381 1360 100 Minus
2R 25286936 2R 13164677..13164832 309..154 780 100 Minus
2R 25286936 2R 13166422..13166562 156..16 690 99.3 Minus
2R 25286936 2R 13164546..13164618 382..310 365 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:07:14 has no hits.

BO06822.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:08 Download gff for BO06822.complete
Subject Subject Range Query Range Percent Splice Strand
GLaz-RA 46..681 17..654 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:47 Download gff for BO06822.complete
Subject Subject Range Query Range Percent Splice Strand
GLaz-RD 222..857 17..654 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:41 Download gff for BO06822.complete
Subject Subject Range Query Range Percent Splice Strand
GLaz-RD 222..857 17..654 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:41 Download gff for BO06822.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13164218..13164489 383..654 99 <- Minus
2R 13164546..13164618 310..382 100 <- Minus
2R 13164677..13164831 155..309 100 <- Minus
2R 13166424..13166561 17..154 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:47 Download gff for BO06822.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9051723..9051994 383..654 99 <- Minus
arm_2R 9052051..9052123 310..382 100 <- Minus
arm_2R 9052182..9052336 155..309 100 <- Minus
arm_2R 9053929..9054066 17..154 99   Minus

BO06822.pep Sequence

Translation from 16 to 670

> BO06822.pep
MMSGQPLGSRVWLLSGVLLVTFAGTDAYGFGRCPNYPSMPKFNMSRVLGH
WYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAVAIKNINRITG
NPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN
FAILWSCGSIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLSLDPERL
IISKNKQCPEALASFLDH

BO06822.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:49:38
Subject Length Description Subject Range Query Range Score Percent Strand
GLaz-PF 212 CG4604-PF 1..212 1..212 1128 100 Plus
GLaz-PE 212 CG4604-PE 1..212 1..212 1128 100 Plus
GLaz-PD 212 CG4604-PD 1..212 1..212 1128 100 Plus
GLaz-PC 212 CG4604-PC 1..212 1..212 1128 100 Plus
GLaz-PB 212 CG4604-PB 1..212 1..212 1128 100 Plus