Clone Sequence Records
BO06822.3prime Sequence
668 bp (667 high quality bases) assembled on 2005-12-03
> BO06822.3prime
ATGGTCTAGAAAGCTTGCCAGCGCCTCGGGGCATTGTTTGTTTTTGCTGA
TGATGAGCCTTTCCGGATCCAGAGAGAGCCGCTTCAACACGTCGTACACT
TTGGATCGGATATCCACCTCGAAGTCCCGATCACGTCCAAGAATCCAGAT
CTGATCGGAGTGACCCAGTGAGCCAATGCTGCCGCAGGACCACAAGATGG
CGAAGTTCTCGTAGTCTGTGTATAGCACCTGGTACTTTCCGGAACCTGGC
AGTAGTCGGGCAATCACGTCCGGAAATCGGGTGGTAAACTTAAAATCCAT
GATGGAGGATCGGCTGTTTTCTGGTGTTGCATAGCCAATGTTCACATTCG
GATTACCAGTTATGCGATTAATGTTTTTAATGGCCACAGCCAGCTTGAAA
TTGGAAAACTTCGATTGTTCGCCCTTGTTGTACGGCTCAAACTGAAAGGT
GGTGCATCCGGAGGCGATTTCCGGAAGGTAAAAAGAGCGCTCTACCTCGT
ACCAGTGTCCAAGGACCCGACTCATGTTAAACTTTGGCATCGATGGATAA
TTCGGGCAACGTCCAAATCCGTAGGCATCTGTCCCAGCAAATGTCACTAA
TAGCACTCCGGACAACAGCCAAACCCTCGAGCCAAGTGGCTGACCACTCA
TCATGTCGACTGATAACT
BO06822.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4604-PA | 639 | GLaz-RA | 1..636 | 654..19 | 3155 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:45:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 1101 | CG4604-RF | 204..840 | 655..19 | 3170 | 99.8 | Minus |
GLaz-RE | 1084 | CG4604-RE | 282..918 | 655..19 | 3170 | 99.8 | Minus |
GLaz-RD | 1023 | CG4604-RD | 221..857 | 655..19 | 3170 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:45:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13164220..13164491 | 19..290 | 1360 | 100 | Plus |
2R | 25286936 | 2R | 13164677..13164832 | 362..517 | 780 | 100 | Plus |
2R | 25286936 | 2R | 13166422..13166562 | 515..655 | 690 | 99.3 | Plus |
2R | 25286936 | 2R | 13164546..13164618 | 289..361 | 365 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:45:14 has no hits.
BO06822.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:34 Download gff for
BO06822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-PA | 1..639 | 18..654 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:01 Download gff for
BO06822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4604-PA | 1..639 | 18..654 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:40:49 Download gff for
BO06822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 8..661 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:43:48 Download gff for
BO06822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 8..661 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:43:48 Download gff for
BO06822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13164546..13164618 | 289..361 | 100 | <- | Plus |
2R | 13164677..13164831 | 362..516 | 100 | <- | Plus |
2R | 13166424..13166568 | 517..661 | 97 | | Plus |
2R | 13164208..13164489 | 8..288 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:40:49 Download gff for
BO06822.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9052182..9052336 | 362..516 | 100 | <- | Plus |
arm_2R | 9051713..9051994 | 8..288 | 98 | <- | Plus |
arm_2R | 9052051..9052123 | 289..361 | 100 | <- | Plus |
arm_2R | 9053929..9054073 | 517..661 | 97 | | Plus |
BO06822.5prime Sequence
668 bp (667 high quality bases) assembled on 2005-12-03
> BO06822.5prime
GAAGTTATCAGTCGACATGATGAGTGGTCAGCCACTTGGCTCGAGGGTTT
GGCTGTTGTCCGGAGTGCTATTAGTGACATTTGCTGGGACAGATGCCTAC
GGATTTGGACGTTGCCCGAATTATCCATCGATGCCAAAGTTTAACATGAG
TCGGGTCCTTGGACACTGGTACGAGGTAGAGCGCTCTTTTTACCTTCCGG
AAATCGCCTCCGGATGCACCACCTTTCAGTTTGAGCCGTACAACAAGGGC
GAACAATCGAAGTTTTCCAATTTCAAGCTGGCTGTGGCCATTAAAAACAT
TAATCGCATAACTGGTAATCCGAATGTGAACATTGGCTATGCAACACCAG
AAAACAGCCGATCCTCCATCATGGATTTTAAGTTTACCACCCGATTTCCG
GACGTGATTGCCCGACTACTGCCAGGTTCCGGAAAGTACCAGGTGCTATA
CACAGACTACGAGAACTTCGCCATCTTGTGGTCCTGCGGCAGCATTGGCT
CACTGGGTCACTCCGATCAGATCTGGATTCTTGGACGTGATCGGGACTTC
GAGGTGGATATCCGATCCAAAGTGTACGACGTGTTGAAGCGGCTCTCTCT
GGATCCGGAAAGGCTCATCATCAGCAAAAACAAACAATGCCCCGAGGCGC
TGGCAAGCTTTCTAGACC
BO06822.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4604-PA | 639 | GLaz-RA | 1..636 | 17..652 | 3155 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:23:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 1101 | CG4604-RF | 204..840 | 16..652 | 3170 | 99.8 | Plus |
GLaz-RE | 1084 | CG4604-RE | 282..918 | 16..652 | 3170 | 99.8 | Plus |
GLaz-RD | 1023 | CG4604-RD | 221..857 | 16..652 | 3170 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13164220..13164491 | 652..381 | 1360 | 100 | Minus |
2R | 25286936 | 2R | 13164677..13164832 | 309..154 | 780 | 100 | Minus |
2R | 25286936 | 2R | 13166422..13166562 | 156..16 | 690 | 99.3 | Minus |
2R | 25286936 | 2R | 13164546..13164618 | 382..310 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:23:02 has no hits.
BO06822.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:35 Download gff for
BO06822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-PA | 1..639 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:02 Download gff for
BO06822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4604-PA | 1..639 | 17..653 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:29 Download gff for
BO06822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 10..663 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:53:10 Download gff for
BO06822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 215..869 | 10..663 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:53:10 Download gff for
BO06822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13164208..13164489 | 383..663 | 98 | <- | Minus |
2R | 13164546..13164618 | 310..382 | 100 | <- | Minus |
2R | 13164677..13164831 | 155..309 | 100 | <- | Minus |
2R | 13166424..13166568 | 10..154 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:29 Download gff for
BO06822.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9051713..9051994 | 383..663 | 98 | <- | Minus |
arm_2R | 9052051..9052123 | 310..382 | 100 | <- | Minus |
arm_2R | 9052182..9052336 | 155..309 | 100 | <- | Minus |
arm_2R | 9053929..9054073 | 10..154 | 97 | | Minus |
BO06822.complete Sequence
670 bp assembled on 2011-06-28
GenBank Submission: KX796180
> BO06822.complete
GAAGTTATCAGTCGACATGATGAGTGGTCAGCCACTTGGCTCGAGGGTTT
GGCTGTTGTCCGGAGTGCTATTAGTGACATTTGCTGGGACAGATGCCTAC
GGATTTGGACGTTGCCCGAATTATCCATCGATGCCAAAGTTTAACATGAG
TCGGGTCCTTGGACACTGGTACGAGGTAGAGCGCTCTTTTTACCTTCCGG
AAATCGCCTCCGGATGCACCACCTTTCAGTTTGAGCCGTACAACAAGGGC
GAACAATCGAAGTTTTCCAATTTCAAGCTGGCTGTGGCCATTAAAAACAT
TAATCGCATAACTGGTAATCCGAATGTGAACATTGGCTATGCAACACCAG
AAAACAGCCGATCCTCCATCATGGATTTTAAGTTTACCACCCGATTTCCG
GACGTGATTGCCCGACTACTGCCAGGTTCCGGAAAGTACCAGGTGCTATA
CACAGACTACGAGAACTTCGCCATCTTGTGGTCCTGCGGCAGCATTGGCT
CACTGGGTCACTCCGATCAGATCTGGATTCTTGGACGTGATCGGGACTTC
GAGGTGGATATCCGATCCAAAGTGTACGACGTGTTGAAGCGGCTCTCTCT
GGATCCGGAAAGGCTCATCATCAGCAAAAACAAACAATGCCCCGAGGCGC
TGGCAAGCTTTCTAGACCAT
BO06822.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:07:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 639 | CG4604-PF | 1..636 | 17..652 | 3165 | 99.8 | Plus |
GLaz-RE | 639 | CG4604-PE | 1..636 | 17..652 | 3165 | 99.8 | Plus |
GLaz-RD | 639 | CG4604-PD | 1..636 | 17..652 | 3165 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-RF | 1101 | CG4604-RF | 204..840 | 16..652 | 3170 | 99.8 | Plus |
GLaz-RE | 1084 | CG4604-RE | 282..918 | 16..652 | 3170 | 99.8 | Plus |
GLaz-RD | 1023 | CG4604-RD | 221..857 | 16..652 | 3170 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:07:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13164220..13164491 | 652..381 | 1360 | 100 | Minus |
2R | 25286936 | 2R | 13164677..13164832 | 309..154 | 780 | 100 | Minus |
2R | 25286936 | 2R | 13166422..13166562 | 156..16 | 690 | 99.3 | Minus |
2R | 25286936 | 2R | 13164546..13164618 | 382..310 | 365 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:07:14 has no hits.
BO06822.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:08 Download gff for
BO06822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RA | 46..681 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:52:47 Download gff for
BO06822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 222..857 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:11:41 Download gff for
BO06822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GLaz-RD | 222..857 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:11:41 Download gff for
BO06822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13164218..13164489 | 383..654 | 99 | <- | Minus |
2R | 13164546..13164618 | 310..382 | 100 | <- | Minus |
2R | 13164677..13164831 | 155..309 | 100 | <- | Minus |
2R | 13166424..13166561 | 17..154 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:52:47 Download gff for
BO06822.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9051723..9051994 | 383..654 | 99 | <- | Minus |
arm_2R | 9052051..9052123 | 310..382 | 100 | <- | Minus |
arm_2R | 9052182..9052336 | 155..309 | 100 | <- | Minus |
arm_2R | 9053929..9054066 | 17..154 | 99 | | Minus |
BO06822.pep Sequence
Translation from 16 to 670
> BO06822.pep
MMSGQPLGSRVWLLSGVLLVTFAGTDAYGFGRCPNYPSMPKFNMSRVLGH
WYEVERSFYLPEIASGCTTFQFEPYNKGEQSKFSNFKLAVAIKNINRITG
NPNVNIGYATPENSRSSIMDFKFTTRFPDVIARLLPGSGKYQVLYTDYEN
FAILWSCGSIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLSLDPERL
IISKNKQCPEALASFLDH
BO06822.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GLaz-PF | 212 | CG4604-PF | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PE | 212 | CG4604-PE | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PD | 212 | CG4604-PD | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PC | 212 | CG4604-PC | 1..212 | 1..212 | 1128 | 100 | Plus |
GLaz-PB | 212 | CG4604-PB | 1..212 | 1..212 | 1128 | 100 | Plus |