Clone Sequence Records
BO06828.3prime Sequence
902 bp (829 high quality bases) assembled on 2005-12-03
> BO06828.3prime
ATGGTCTAGAAAGCTTGCTGATCGCTTGTAGGGCTTAAGAAGAGCCTTTT
GGCAGTAGCTGATCACTTCCTCAAGTTCCGAATCTTCACTCTTCACGAGA
AGTTCCTCAACTTGCAGAAACTTGAACTTTCCACGCTCCTGTGGCAAGCA
ATTCCGGAATGCAATGGCCGCACAGTAGTCCTCCTGCAGTAAATGCTCCT
CGAAATGCCAATTGTCCATGGGTTGGTCGTGGCAACGCAGACTAGTACCG
ATCAGAGGGGAAACATCTGTCTCCAAACTGCGAGTAGTGTCCACTGAGAA
GCTGATCTTTTGCAGATCTACAGTGATGCCAACACCCAGCTCCTTGACGT
ACGCCTCCTTGAGACACCAGTGACGCATAAAGGCCTTCACCTGCTCCCGT
TCATCATGATGCGGTCTTCCAATATAACTCCATTCCTCCGCCGAAAATTT
GCTCTTCATCAGGCCAAAGAATTCCGACAGAGGCTTGCCACCATTGTACT
CGATCTTCATGACATCTGTGCCGATTCCAAAGTCGGGATCACTGCTCTCT
CCTGCAATGCCCGCTAGAAGTACCAGGCTTCCCTGATGGGAGACATTGAA
GCTGAGAGGTGGCCCATCGTAGTCCTCCCCTTTCACCCAGTAAGGTTTAC
CCCTCACATCCCGGGCGAACTTCACTTCGGCCGACGGCAATCCGCTGCAC
GTGCTCACATATTTTCGCATGANAAGACGACCAATTAGCGAGGACAGAAA
GTCATCGATAAAGTGGAACTTCATAAGCCGAGCTCGTTCCTCCGGTTGAA
TTGAGGCCACCGCCTGGCTCAGTTGAGGTAGTGTGGGCCTCCAGCTGCCC
AGGTCAAAGGCCCAGCGGGTGCAGATGTGTTTGCTCATGTCGACTGAATA
CT
BO06828.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32099-PA | 873 | eap-RA | 1..870 | 888..19 | 4331 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:45:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 1057 | CG32099-RA | 95..964 | 888..19 | 4339 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:45:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12149367..12150236 | 888..19 | 4339 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 16:45:42 has no hits.
BO06828.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:45 Download gff for
BO06828.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-PA | 1..873 | 16..888 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:14 Download gff for
BO06828.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32099-PA | 1..873 | 16..888 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:40:51 Download gff for
BO06828.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..964 | 19..896 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:44:51 Download gff for
BO06828.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..964 | 19..896 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:44:51 Download gff for
BO06828.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12149360..12150236 | 19..896 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:40:51 Download gff for
BO06828.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12142460..12143336 | 19..896 | 99 | | Minus |
BO06828.5prime Sequence
867 bp (818 high quality bases) assembled on 2005-12-03
> BO06828.5prime
GAAGTTATCAGTCGACATGAGCAAACACATCTGCACCCGCTGGGCCTTTG
ACCTGGGCAGCTGGAGGCCCACACTACCTCAACTGAGCCAGGCGGTGGCC
TCAATTCAACCGGAGGAACGAGCTCGGCTTATGAAGTTCCACTTTATCGA
TGACTTTCTGTCCTCGCTAATTGGTCGTCTTTTCATGCGAAAATATGTGA
GCACGTGCAGCGGATTGCCGTCGGCCGAAGTGAAGTTCGCCCGGGATGTG
AGGGGTAAACCTTACTGGGTGAAAGGGGAGGACTACGATGGGCCACCTCT
CAGCTTCAATGTCTCCCATCAGGGAAGCCTGGTACTTCTAGCGGGCATTG
CAGGAGAGAGCAGTGATCCCGACTTTGGAATCGGCACAGATGTCATGAAG
ATCGAGTACAATGGTGGCAAGCCTCTGTCGGAATTCTTTGGCCTGATGAA
GAGCAAATTTTCGGCGGAGGAATGGAGTTATATTGGAAGACCGCATCATG
ATGAACGGGAGCAGGTGAAGGCCTTTATGCGTCACTGGTGTCTCAAGGAG
GCGTACGTCAAGGAGCTGGGTGTTGGCATCACTGTAGATCTGCAAAAGAT
CAGCTTCTCAGTGGACACTACTCGCAGTTTGGAGACAGATGTTTCCCCTC
TGATCGGTACTAGTCTGCGTTGCCACGACCAACCCATGGACAATTGGCAT
TTCGAGGAGCATTTACTGCAGGAGGACTACTGTGCGGCCATTGCATTCCG
GAATTGCTTGCCACAGGAGCGTGGAAAGTTCAAGTTTCTGCAAGTTGAGG
AACTTCTCGTGAAGAGTGAAGATTCGGAACTTGAGGAAGTGATCAGCTAC
TGCCAAAAGGCTCTTCT
BO06828.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32099-PA | 873 | eap-RA | 1..851 | 17..867 | 4255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 16:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 1057 | CG32099-RA | 95..945 | 17..867 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 16:46:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12149367..12150217 | 17..867 | 4255 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 16:46:10 has no hits.
BO06828.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:46 Download gff for
BO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-PA | 1..851 | 17..867 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:16 Download gff for
BO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32099-PA | 1..851 | 17..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:40:52 Download gff for
BO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..945 | 9..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:45:47 Download gff for
BO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..945 | 9..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 18:45:47 Download gff for
BO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12149360..12150217 | 9..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:40:52 Download gff for
BO06828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12142460..12143317 | 9..867 | 99 | | Plus |
BO06828.complete Sequence
904 bp (904 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630550
> BO06828.complete
GAAGTTATCAGTCGACATGAGCAAACACATCTGCACCCGCTGGGCCTTTG
ACCTGGGCAGCTGGAGGCCCACACTACCTCAACTGAGCCAGGCGGTGGCC
TCAATTCAACCGGAGGAACGAGCTCGGCTTATGAAGTTCCACTTTATCGA
TGACTTTCTGTCCTCGCTAATTGGTCGTCTTTTCATGCGAAAATATGTGA
GCACGTGCAGCGGATTGCCGTCGGCCGAAGTGAAGTTCGCCCGGGATGTG
AGGGGTAAACCTTACTGGGTGAAAGGGGAGGACTACGATGGGCCACCTCT
CAGCTTCAATGTCTCCCATCAGGGAAGCCTGGTACTTCTAGCGGGCATTG
CAGGAGAGAGCAGTGATCCCGACTTTGGAATCGGCACAGATGTCATGAAG
ATCGAGTACAATGGTGGCAAGCCTCTGTCGGAATTCTTTGGCCTGATGAA
GAGCAAATTTTCGGCGGAGGAATGGAGTTATATTGGAAGACCGCATCATG
ATGAACGGGAGCAGGTGAAGGCCTTTATGCGTCACTGGTGTCTCAAGGAG
GCGTACGTCAAGGAGCTGGGTGTTGGCATCACTGTAGATCTGCAAAAGAT
CAGCTTCTCAGTGGACACTACTCGCAGTTTGGAGACAGATGTTTCCCCTC
TGATCGGTACTAGTCTGCGTTGCCACGACCAACCCATGGACAATTGGCAT
TTCGAGGAGCATTTACTGCAGGAGGACTACTGTGCGGCCATTGCATTCCG
GAATTGCTTGCCACAGGAGCGTGGAAAGTTCAAGTTTCTGCAAGTTGAGG
AACTTCTCGTGAAGAGTGAAGATTCGGAACTTGAGGAAGTGATCAGCTAC
TGCCAAAAGGCTCTTCTTAAGCCCTACAAGCGATCAGCAAGCTTTCTAGA
CCAT
BO06828.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 873 | CG32099-PA | 1..870 | 17..886 | 4350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-RA | 1057 | CG32099-RA | 95..964 | 17..886 | 4350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:54:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12149367..12150236 | 17..886 | 4350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:54:20 has no hits.
BO06828.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:43 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 1..873 | 17..889 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:43:49 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..964 | 9..886 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:46 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 95..964 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:43 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 88..964 | 9..886 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:24 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eap-RA | 95..964 | 17..888 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:55:24 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12149367..12150236 | 17..888 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:46 Download gff for
BO06828.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12142467..12143336 | 17..888 | 99 | | Plus |
BO06828.pep Sequence
Translation from 16 to 904
> BO06828.pep
MSKHICTRWAFDLGSWRPTLPQLSQAVASIQPEERARLMKFHFIDDFLSS
LIGRLFMRKYVSTCSGLPSAEVKFARDVRGKPYWVKGEDYDGPPLSFNVS
HQGSLVLLAGIAGESSDPDFGIGTDVMKIEYNGGKPLSEFFGLMKSKFSA
EEWSYIGRPHHDEREQVKAFMRHWCLKEAYVKELGVGITVDLQKISFSVD
TTRSLETDVSPLIGTSLRCHDQPMDNWHFEEHLLQEDYCAAIAFRNCLPQ
ERGKFKFLQVEELLVKSEDSELEEVISYCQKALLKPYKRSASFLDH
BO06828.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:26:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eap-PA | 290 | CG32099-PA | 1..290 | 1..290 | 1543 | 100 | Plus |
