Clone Sequence Records
BO06831.3prime Sequence
704 bp (703 high quality bases) assembled on 2005-12-03
> BO06831.3prime
ATGGTCTAGAAAGCTTGCTGATGATGCCAAGTACCTGGTGACCTTCAGTA
TGCACAAATGCTCGCCAGGAATGCGTCGCTCCATGAACTTAACAGCCCGG
AACTGGAGGCCCTCTAAGTATTTGATAATCTCCTCCGGCTTGTTCTCCCG
CAGCAGGAGTAGGTAGAGCACGCCTCGAGGCGAAAGAATGTCATCCAATT
GCTTGAGTAGAATGTCCGTGACGCGTCGCCCGTCCTGTCCACCAGCCCAG
GAGAAAACCAGATTGCGATCCGTTGAGGATTCGCTGTGCGAATCGAACTG
TTGCGTCTGCAGCTCCTCGTCACTGGTGACTACATAGGGCGGATTGAAGA
GCAGCACGTCCACGGATCGCGGACGCAGTGCATCCGCTAGGCTGCAGCGA
ATGCTATCCAAGCGAGCGCCATTCCGAGTCGCAGTTCTTCGAGTGGCATT
GCAGGCTTTGGGATTGATATCCGTAGCTAGGCACAGCGAAAAGCCAGCCA
GTTTCTTGGCCAGCGCCGTGATGATCACACCCGAACCGGAGCCCAGTTCG
ACGCAGAGACTCGGCTGTAGCCGGTCCAGGTACTCCAGATCCTTTTCCAG
GGCATCCAGCAGCAGGAACGAGTCCTCCGCTGGCTCGTAAACGTGCTCGA
AATCTTCTGGGCTCAAGTGGTCGGTGTAGGGCGTCTCCATGTCGACTGAT
AACT
BO06831.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-PA | 675 | CG9960-RA | 1..672 | 690..19 | 3360 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:12:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1125 | 695..19 | 3370 | 99.9 | Minus |
| CG9960-RA | 1251 | CG9960-RA | 449..1125 | 695..19 | 3370 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758553..2759229 | 19..695 | 3370 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-04 20:12:18 has no hits.
BO06831.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:51 Download gff for
BO06831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 16..690 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:22 Download gff for
BO06831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 16..690 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:23:08 Download gff for
BO06831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 12..704 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:46:40 Download gff for
BO06831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 12..704 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:46:40 Download gff for
BO06831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758548..2759237 | 12..704 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:23:08 Download gff for
BO06831.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758548..2759237 | 12..704 | 98 | | Plus |
BO06831.5prime Sequence
704 bp (703 high quality bases) assembled on 2005-12-03
> BO06831.5prime
GAAGTTATCAGTCGACATGGAGACGCCCTACACCGACCACTTGAGCCCAG
AAGATTTCGAGCACGTTTACGAGCCAGCGGAGGACTCGTTCCTGCTGCTG
GATGCCCTGGAAAAGGATCTGGAGTACCTGGACCGGCTACAGCCGAGTCT
CTGCGTCGAACTGGGCTCCGGTTCGGGTGTGATCATCACGGCGCTGGCCA
AGAAACTGGCTGGCTTTTCGCTGTGCCTAGCTACGGATATCAATCCCAAA
GCCTGCAATGCCACTCGAAGAACTGCGACTCGGAATGGCGCTCGCTTGGA
TAGCATTCGCTGCAGCCTAGCGGATGCACTGCGTCCGCGATCCGTGGACG
TGCTGCTCTTCAATCCGCCCTATGTAGTCACCAGTGACGAGGAGCTGCAG
ACGCAACAGTTCGATTCGCACAGCGAATCCTCAACGGATCGCAATCTGGT
TTTCTCCTGGGCTGGTGGACAGGACGGGCGACGCGTCACGGACATTCTAC
TCAAGCAATTGGATGACATTCTTTCGCCTCGAGGCGTGCTCTACCTACTC
CTGCTGCGGGAGAACAAGCCGGAGGAGATTATCAAATACTTAGAGGGCCT
CCAGTTCCGGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATT
TGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCAGCAAGCTTTCTA
GACC
BO06831.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-PA | 675 | CG9960-RA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1125 | 12..688 | 3370 | 99.9 | Plus |
| CG9960-RA | 1251 | CG9960-RA | 449..1125 | 12..688 | 3370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758553..2759229 | 688..12 | 3370 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-12 07:04:37 has no hits.
BO06831.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:00:52 Download gff for
BO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:24 Download gff for
BO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-PA | 1..675 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:33:54 Download gff for
BO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 2..695 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:09:33 Download gff for
BO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 440..1130 | 2..695 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:09:33 Download gff for
BO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758548..2759238 | 2..695 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:33:54 Download gff for
BO06831.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758548..2759238 | 2..695 | 98 | | Minus |
BO06831.complete Sequence
706 bp (706 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630552
> BO06831.complete
GAAGTTATCAGTCGACATGGAGACGCCCTACACCGACCACTTGAGCCCAG
AAGATTTCGAGCACGTTTACGAGCCAGCGGAGGACTCGTTCCTGCTGCTG
GATGCCCTGGAAAAGGATCTGGAGTACCTGGACCGGCTACAGCCGAGTCT
CTGCGTCGAACTGGGCTCCGGTTCGGGTGTGATCATCACGGCGCTGGCCA
AGAAACTGGCTGGCTTTTCGCTGTGCCTAGCTACGGATATCAATCCCAAA
GCCTGCAATGCCACTCGAAGAACTGCGACTCGGAATGGCGCTCGCTTGGA
TAGCATTCGCTGCAGCCTAGCGGATGCACTGCGTCCGCGATCCGTGGACG
TGCTGCTCTTCAATCCGCCCTATGTAGTCACCAGTGACGAGGAGCTGCAG
ACGCAACAGTTCGATTCGCACAGCGAATCCTCAACGGATCGCAATCTGGT
TTTCTCCTGGGCTGGTGGACAGGACGGGCGACGCGTCACGGACATTCTAC
TCAAGCAATTGGATGACATTCTTTCGCCTCGAGGCGTGCTCTACCTACTC
CTGCTGCGGGAGAACAAGCCGGAGGAGATTATCAAATACTTAGAGGGCCT
CCAGTTCCGGGCTGTTAAGTTCATGGAGCGACGCATTCCTGGCGAGCATT
TGTGCATACTGAAGGTCACCAGGTACTTGGCATCATCAGCAAGCTTTCTA
GACCAT
BO06831.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:06:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-RA | 675 | CG9960-PA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:06:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snapin-RA | 1251 | CG9958-RA | 449..1125 | 12..688 | 3370 | 99.9 | Plus |
| CG9960-RA | 1251 | CG9960-RA | 449..1125 | 12..688 | 3370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:06:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2758553..2759229 | 688..12 | 3370 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 17:06:13 has no hits.
BO06831.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:45 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 1..675 | 17..691 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:43:52 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snapin-RA | 473..1163 | 2..695 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:57:09 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 454..1125 | 17..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:46 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snapin-RA | 473..1163 | 2..695 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:34:48 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9960-RA | 454..1125 | 17..690 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:34:48 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2758549..2759224 | 17..690 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:57:09 Download gff for
BO06831.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2758549..2759224 | 17..690 | 99 | | Minus |
BO06831.pep Sequence
Translation from 16 to 706
> BO06831.pep
METPYTDHLSPEDFEHVYEPAEDSFLLLDALEKDLEYLDRLQPSLCVELG
SGSGVIITALAKKLAGFSLCLATDINPKACNATRRTATRNGARLDSIRCS
LADALRPRSVDVLLFNPPYVVTSDEELQTQQFDSHSESSTDRNLVFSWAG
GQDGRRVTDILLKQLDDILSPRGVLYLLLLRENKPEEIIKYLEGLQFRAV
KFMERRIPGEHLCILKVTRYLASSASFLDH
BO06831.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:26:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9960-PA | 224 | CG9960-PA | 1..224 | 1..224 | 1146 | 100 | Plus |
