Clone BO06844 Report

Search the DGRC for BO06844

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:68
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG1648-RA
Protein status:BO06844.pep: validated full length
Sequenced Size:724

Clone Sequence Records

BO06844.3prime Sequence

722 bp (721 high quality bases) assembled on 2005-12-03

> BO06844.3prime
ATGGTCTAGAAAGCTTGCCTTCTGACCCAGATGCAGCTTGCCCAACAGGG
CGTTGGCCTGCTGTCCGGCAGACTCCTGGGCCTGTCCGGCCGCATCCTGG
ACGGTCTTCTCGACGGACTGGCGCTTCTGGTCGACATACTGGTTGGCCTC
CTGCAGCTTCTGGTCCACCGTTTGACTGGTCTGCTTCAGTGCCCCATCGA
TGGCGCCCTCCGCCTGCTTCAGCTTCTGGTCCGCCACGTTCTCGGCGGCC
TTCACGCTCTTGTTGATGGCGTCGTTGGCCGCCTTCTTGGTCTGGTCCAC
CGCATTGGCGGCCGCTCGCTGGGAGGCCTCCGCCACATTGGCCGCCACCT
GCTTGGAGTTCTGGGCCACGGCCGCCGCCTGGGCCACCGTGTTGTCCACC
GCCTGCTTGCCTTGGTTGACGGCTCCGGCGGCACGGTTCACACCCTGGTC
AATCGCCTGTCCAGCCTTCTGAGCCTCCGCGGTGGCCAGAGCAGCGGCTT
CCTTGGCCGTGCTGGCGGCCAACTGCTCGGCCTCGCCCTTGGTCTGCTGT
ACGGACTGGCCCACCTTCTTGGCCTGCTCCTCGGCTAGCTTCTGGGCCTC
GGCAGCCTTCTCGTTGGCCAGCTTCTCGGCCTCATCCTTCTTCTTGCTGA
AGAGGTTGGCGGTCTTGTCACCGAAGTTCTTCAAGGAAGCTGAAATCGAG
CTGAACATGTCGACTGATAACT

BO06844.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-PA 693 CG1648-RA 1..690 708..19 3450 100 Minus
CG1648-PB 699 CG1648-RB 26..696 689..19 3355 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:05:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-RC 1392 CG1648-RC 196..885 708..19 3450 100 Minus
CG1648-RA 1047 CG1648-RA 196..885 708..19 3450 100 Minus
CG1648-RB 884 CG1648-RB 52..722 689..19 3355 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:05:00
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9811481..9811969 19..507 2445 100 Plus
2R 25286936 2R 9812482..9812667 507..692 930 100 Plus
Blast to na_te.dros performed 2015-02-12 07:05:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 2933..2997 246..182 109 63.1 Minus

BO06844.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:01:15 Download gff for BO06844.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-PA 1..693 18..708 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:54 Download gff for BO06844.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-PA 1..693 18..708 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:34:01 Download gff for BO06844.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 191..885 19..713 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:11:17 Download gff for BO06844.3prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 191..885 19..713 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:11:17 Download gff for BO06844.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9811481..9811968 19..506 100 <- Plus
2R 9812482..9812664 507..689 100 <- Plus
2R 9819840..9819863 690..713 91   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:34:01 Download gff for BO06844.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5698986..5699473 19..506 100 <- Plus
arm_2R 5699987..5700169 507..689 100 <- Plus
arm_2R 5707345..5707368 690..713 91   Plus

BO06844.5prime Sequence

722 bp (721 high quality bases) assembled on 2005-12-03

> BO06844.5prime
GAAGTTATCAGTCGACATGTTCAGCTCGATTTCAGCTTCCTTGAAGAACT
TCGGTGACAAGACCGCCAACCTCTTCAGCAAGAAGAAGGATGAGGCCGAG
AAGCTGGCCAACGAGAAGGCTGCCGAGGCCCAGAAGCTAGCCGAGGAGCA
GGCCAAGAAGGTGGGCCAGTCCGTACAGCAGACCAAGGGCGAGGCCGAGC
AGTTGGCCGCCAGCACGGCCAAGGAAGCCGCTGCTCTGGCCACCGCGGAG
GCTCAGAAGGCTGGACAGGCGATTGACCAGGGTGTGAACCGTGCCGCCGG
AGCCGTCAACCAAGGCAAGCAGGCGGTGGACAACACGGTGGCCCAGGCGG
CGGCCGTGGCCCAGAACTCCAAGCAGGTGGCGGCCAATGTGGCGGAGGCC
TCCCAGCGAGCGGCCGCCAATGCGGTGGACCAGACCAAGAAGGCGGCCAA
CGACGCCATCAACAAGAGCGTGAAGGCCGCCGAGAACGTGGCGGACCAGA
AGCTGAAGCAGGCGGAGGGCGCCATCGATGGGGCACTGAAGCAGACCAGT
CAAACGGTGGACCAGAAGCTGCAGGAGGCCAACCAGTATGTCGACCAGAA
GCGCCAGTCCGTCGAGAAGACCGTCCAGGATGCGGCCGGACAGGCCCAGG
AGTCTGCCGGACAGCAGGCCAACGCCCTGTTGGGCAAGCTGCATCTGGGT
CAGAAGGCAAGCTTTCTAGACC

BO06844.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-PA 693 CG1648-RA 1..690 17..706 3450 100 Plus
CG1648-PB 699 CG1648-RB 26..696 36..706 3355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:10:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-RC 1392 CG1648-RC 196..885 17..706 3450 100 Plus
CG1648-RA 1047 CG1648-RA 196..885 17..706 3450 100 Plus
CG1648-RB 884 CG1648-RB 52..722 36..706 3355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9811481..9811969 706..218 2445 100 Minus
2R 25286936 2R 9812482..9812667 218..33 930 100 Minus
Blast to na_te.dros performed 2015-02-13 16:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 2933..2997 479..543 109 63.1 Plus

BO06844.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:01:16 Download gff for BO06844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-PA 1..693 17..707 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:37:55 Download gff for BO06844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-PA 1..693 17..707 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:09:26 Download gff for BO06844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 191..885 12..706 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:39:17 Download gff for BO06844.5prime
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 191..885 12..706 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:39:17 Download gff for BO06844.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9812482..9812664 36..218 100 <- Minus
2R 9819840..9819863 12..35 91   Minus
2R 9811481..9811968 219..706 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:09:26 Download gff for BO06844.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5698986..5699473 219..706 100 <- Minus
arm_2R 5699987..5700169 36..218 100 <- Minus
arm_2R 5707345..5707368 12..35 91   Minus

BO06844.complete Sequence

724 bp (724 high quality bases) assembled on 2005-11-29

GenBank Submission: FJ630559

> BO06844.complete
GAAGTTATCAGTCGACATGTTCAGCTCGATTTCAGCTTCCTTGAAGAACT
TCGGTGACAAGACCGCCAACCTCTTCAGCAAGAAGAAGGATGAGGCCGAG
AAGCTGGCCAACGAGAAGGCTGCCGAGGCCCAGAAGCTAGCCGAGGAGCA
GGCCAAGAAGGTGGGCCAGTCCGTACAGCAGACCAAGGGCGAGGCCGAGC
AGTTGGCCGCCAGCACGGCCAAGGAAGCCGCTGCTCTGGCCACCGCGGAG
GCTCAGAAGGCTGGACAGGCGATTGACCAGGGTGTGAACCGTGCCGCCGG
AGCCGTCAACCAAGGCAAGCAGGCGGTGGACAACACGGTGGCCCAGGCGG
CGGCCGTGGCCCAGAACTCCAAGCAGGTGGCGGCCAATGTGGCGGAGGCC
TCCCAGCGAGCGGCCGCCAATGCGGTGGACCAGACCAAGAAGGCGGCCAA
CGACGCCATCAACAAGAGCGTGAAGGCCGCCGAGAACGTGGCGGACCAGA
AGCTGAAGCAGGCGGAGGGCGCCATCGATGGGGCACTGAAGCAGACCAGT
CAAACGGTGGACCAGAAGCTGCAGGAGGCCAACCAGTATGTCGACCAGAA
GCGCCAGTCCGTCGAGAAGACCGTCCAGGATGCGGCCGGACAGGCCCAGG
AGTCTGCCGGACAGCAGGCCAACGCCCTGTTGGGCAAGCTGCATCTGGGT
CAGAAGGCAAGCTTTCTAGACCAT

BO06844.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-RC 693 CG1648-PC 1..690 17..706 3450 100 Plus
CG1648-RA 693 CG1648-PA 1..690 17..706 3450 100 Plus
CG1648-RB 699 CG1648-PB 26..696 36..706 3355 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:43:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-RC 1392 CG1648-RC 196..885 17..706 3450 100 Plus
CG1648-RA 1047 CG1648-RA 196..885 17..706 3450 100 Plus
CG1648-RB 884 CG1648-RB 52..722 36..706 3355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:43:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9811481..9811969 706..218 2445 100 Minus
2R 25286936 2R 9812482..9812667 218..33 930 100 Minus
Blast to na_te.dros performed 2014-11-26 21:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 2933..2997 479..543 109 63.1 Plus

BO06844.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:45:52 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 1..693 17..707 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 05:04:13 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 189..883 12..706 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:49 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 201..885 22..708 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:45:52 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 189..883 12..706 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:42 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
CG1648-RA 201..885 22..708 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:42 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9811479..9811968 219..708 99 <- Minus
2R 9812482..9812675 26..218 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:49 Download gff for BO06844.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5698984..5699473 219..708 99 <- Minus
arm_2R 5699987..5700180 26..218 97   Minus

BO06844.pep Sequence

Translation from 16 to 724

> BO06844.pep
MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEAQKLAEEQAKKVG
QSVQQTKGEAEQLAASTAKEAAALATAEAQKAGQAIDQGVNRAAGAVNQG
KQAVDNTVAQAAAVAQNSKQVAANVAEASQRAAANAVDQTKKAANDAINK
SVKAAENVADQKLKQAEGAIDGALKQTSQTVDQKLQEANQYVDQKRQSVE
KTVQDAAGQAQESAGQQANALLGKLHLGQKASFLDH

BO06844.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG1648-PC 230 CG1648-PC 1..230 1..230 1096 100 Plus
CG1648-PA 230 CG1648-PA 1..230 1..230 1096 100 Plus
CG1648-PB 232 CG1648-PB 10..232 8..230 1065 100 Plus
CG45076-PH 619 CG45076-PH 331..545 23..218 154 26 Plus
CG45076-PA 619 CG45076-PA 331..545 23..218 154 26 Plus
CG45076-PH 619 CG45076-PH 356..562 19..221 151 28.8 Plus