Clone Sequence Records
BO06850.3prime Sequence
462 bp (461 high quality bases) assembled on 2005-12-03
> BO06850.3prime
ATGGTCTAGAAAGCTTGCCTTTGGCGACCGACTTGGAGGATCCATAATTA
GATGCCTTGCTGATCTGCGTCTTGTTGATGGCCTGACCCATGAGCCAGTA
AAAAAGTCCCAGGACGGAAAGTGCGGTGATAAAGGCCGTCCAGTTGGCCG
CCAGCAGGGATGTGATCACGTAGTAGAAAATGCAGGACAGAGAGAATACC
GCCCAGCAGACAAAGTTCACGAGTGAGCACAGCCGGCGTTTATTCACATA
TGCCGGAACCTCCTTTATGCCGGACGTCTTAAAGAAGCTGCCCGTCTCCA
GGAAGCTATCGATGATCTTGTCCTTCTCCACGAACAGGTTCTGCAGCCAG
GCGGCCGCCTCCTTCTCATCCTCCGGAACCTGTTCCAGTGGAATACGCCT
CATCAGCAGGTGCGGTTCCACGCTCTTTCCATGCAGCAAACTCAGCATGT
CGACTGATAACT
BO06850.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:50:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-PA | 1161 | CG4729-RA | 730..1154 | 448..24 | 2125 | 100 | Minus |
CG4729-PC | 1161 | CG4729-RC | 730..1154 | 448..24 | 2125 | 100 | Minus |
CG4729-PB | 1161 | CG4729-RB | 730..1154 | 448..24 | 2125 | 100 | Minus |
CG4729-PD | 432 | CG4729-RD | 1..425 | 448..24 | 2125 | 100 | Minus |
CG4753-PB | 1143 | CG4753-RB | 838..886 | 325..277 | 145 | 91.8 | Minus |
CG4753-PA | 1143 | CG4753-RA | 838..886 | 325..277 | 145 | 91.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:24:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-RE | 1849 | CG4729-RE | 1118..1542 | 448..24 | 2125 | 100 | Minus |
CG4729-RD | 845 | CG4729-RD | 114..538 | 448..24 | 2125 | 100 | Minus |
CG4729-RB | 1672 | CG4729-RB | 941..1365 | 448..24 | 2125 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:24:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16382382..16382727 | 103..448 | 1730 | 100 | Plus |
3L | 28110227 | 3L | 16382079..16382157 | 24..102 | 395 | 100 | Plus |
3L | 28110227 | 3L | 16379425..16379558 | 258..391 | 325 | 82.8 | Plus |
Blast to na_te.dros performed on 2015-02-11 03:24:22 has no hits.
BO06850.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:01:28 Download gff for
BO06850.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-PA | 730..1161 | 15..448 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:38:10 Download gff for
BO06850.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-PD | 1..432 | 15..448 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:54:14 Download gff for
BO06850.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1377 | 9..448 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:43:34 Download gff for
BO06850.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1377 | 9..448 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:43:34 Download gff for
BO06850.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16382067..16382157 | 9..102 | 95 | <- | Plus |
3L | 16382382..16382727 | 103..448 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:54:14 Download gff for
BO06850.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16375167..16375257 | 9..102 | 95 | <- | Plus |
arm_3L | 16375482..16375827 | 103..448 | 100 | | Plus |
BO06850.5prime Sequence
462 bp (461 high quality bases) assembled on 2005-12-03
> BO06850.5prime
GAAGTTATCAGTCGACATGCTGAGTTTGCTGCATGGAAAGAGCGTGGAAC
CGCACCTGCTGATGAGGCGTATTCCACTGGAACAGGTTCCGGAGGATGAG
AAGGAGGCGGCCGCCTGGCTGCAGAACCTGTTCGTGGAGAAGGACAAGAT
CATCGATAGCTTCCTGGAGACGGGCAGCTTCTTTAAGACGTCCGGCATAA
AGGAGGTTCCGGCATATGTGAATAAACGCCGGCTGTGCTCACTCGTGAAC
TTTGTCTGCTGGGCGGTATTCTCTCTGTCCTGCATTTTCTACTACGTGAT
CACATCCCTGCTGGCGGCCAACTGGACGGCCTTTATCACCGCACTTTCCG
TCCTGGGACTTTTTTACTGGCTCATGGGTCAGGCCATCAACAAGACGCAG
ATCAGCAAGGCATCTAATTATGGATCCTCCAAGTCGGTCGCCAAAGGCAA
GCTTTCTAGACC
BO06850.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:50:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-PA | 1161 | CG4729-RA | 730..1154 | 17..441 | 2125 | 100 | Plus |
CG4729-PC | 1161 | CG4729-RC | 730..1154 | 17..441 | 2125 | 100 | Plus |
CG4729-PB | 1161 | CG4729-RB | 730..1154 | 17..441 | 2125 | 100 | Plus |
CG4729-PD | 432 | CG4729-RD | 1..425 | 17..441 | 2125 | 100 | Plus |
CG4753-PB | 1143 | CG4753-RB | 838..886 | 140..188 | 145 | 91.8 | Plus |
CG4753-PA | 1143 | CG4753-RA | 838..886 | 140..188 | 145 | 91.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:48:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-RE | 1849 | CG4729-RE | 1118..1542 | 17..441 | 2125 | 100 | Plus |
CG4729-RD | 845 | CG4729-RD | 114..538 | 17..441 | 2125 | 100 | Plus |
CG4729-RB | 1672 | CG4729-RB | 941..1365 | 17..441 | 2125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16382382..16382727 | 362..17 | 1730 | 100 | Minus |
3L | 28110227 | 3L | 16382079..16382157 | 441..363 | 395 | 100 | Minus |
3L | 28110227 | 3L | 16379425..16379558 | 207..74 | 325 | 82.8 | Minus |
Blast to na_te.dros performed on 2015-02-12 15:48:34 has no hits.
BO06850.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:01:29 Download gff for
BO06850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-PA | 730..1161 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:38:12 Download gff for
BO06850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-PD | 1..432 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:14:55 Download gff for
BO06850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1377 | 17..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:24:08 Download gff for
BO06850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1377 | 17..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:24:08 Download gff for
BO06850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16382067..16382157 | 363..456 | 95 | <- | Minus |
3L | 16382382..16382727 | 17..362 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:14:55 Download gff for
BO06850.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16375167..16375257 | 363..456 | 95 | <- | Minus |
arm_3L | 16375482..16375827 | 17..362 | 100 | | Minus |
BO06850.complete Sequence
464 bp assembled on 2011-06-28
> BO06850.complete
GAAGTTATCAGTCGACATGCTGAGTTTGCTGCATGGAAAGAGCGTGGAAC
CGCACCTGCTGATGAGGCGTATTCCACTGGAACAGGTTCCGGAGGATGAG
AAGGAGGCGGCCGCCTGGCTGCAGAACCTGTTCGTGGAGAAGGACAAGAT
CATCGATAGCTTCCTGGAGACGGGCAGCTTCTTTAAGACGTCCGGCATAA
AGGAGGTTCCGGCATATGTGAATAAACGCCGGCTGTGCTCACTCGTGAAC
TTTGTCTGCTGGGCGGTATTCTCTCTGTCCTGCATTTTCTACTACGTGAT
CACATCCCTGCTGGCGGCCAACTGGACGGCCTTTATCACCGCACTTTCCG
TCCTGGGACTTTTTTACTGGCTCATGGGTCAGGCCATCAACAAGACGCAG
ATCAGCAAGGCATCTAATTATGGATCCTCCAAGTCGGTCGCCAAAGGCAA
GCTTTCTAGACCAT
BO06850.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-RE | 1194 | CG4729-PE | 763..1187 | 17..441 | 2125 | 100 | Plus |
CG4729-RD | 432 | CG4729-PD | 1..425 | 17..441 | 2125 | 100 | Plus |
CG4729-RB | 1161 | CG4729-PB | 730..1154 | 17..441 | 2125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-RE | 1849 | CG4729-RE | 1118..1542 | 17..441 | 2125 | 100 | Plus |
CG4729-RD | 845 | CG4729-RD | 114..538 | 17..441 | 2125 | 100 | Plus |
CG4729-RB | 1672 | CG4729-RB | 941..1365 | 17..441 | 2125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16382382..16382727 | 362..17 | 1730 | 100 | Minus |
3L | 28110227 | 3L | 16382079..16382157 | 441..363 | 395 | 100 | Minus |
3L | 28110227 | 3L | 16379425..16379558 | 207..74 | 325 | 82.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:10:48 has no hits.
BO06850.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-28 12:16:15 Download gff for
BO06850.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1369 | 17..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:54:10 Download gff for
BO06850.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1369 | 17..448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:56 Download gff for
BO06850.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4729-RB | 941..1369 | 17..448 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:56 Download gff for
BO06850.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16382073..16382157 | 363..448 | 96 | <- | Minus |
3L | 16382382..16382727 | 17..362 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:54:10 Download gff for
BO06850.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16375173..16375257 | 363..448 | 96 | <- | Minus |
arm_3L | 16375482..16375827 | 17..362 | 100 | | Minus |
BO06850.pep Sequence
Translation from 16 to 463
> BO06850.pep
MLSLLHGKSVEPHLLMRRIPLEQVPEDEKEAAAWLQNLFVEKDKIIDSFL
ETGSFFKTSGIKEVPAYVNKRRLCSLVNFVCWAVFSLSCIFYYVITSLLA
ANWTAFITALSVLGLFYWLMGQAINKTQISKASNYGSSKSVAKGKLSRP
BO06850.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:50:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4729-PD | 143 | CG4729-PD | 1..143 | 1..143 | 734 | 100 | Plus |
CG4729-PB | 386 | CG4729-PB | 244..386 | 1..143 | 734 | 100 | Plus |
CG4729-PC | 386 | CG4729-PC | 244..386 | 1..143 | 734 | 100 | Plus |
CG4729-PA | 386 | CG4729-PA | 244..386 | 1..143 | 734 | 100 | Plus |
CG4729-PE | 397 | CG4729-PE | 255..397 | 1..143 | 734 | 100 | Plus |