Clone Sequence Records
BO06892.3prime Sequence
863 bp (782 high quality bases) assembled on 2005-12-03
> BO06892.3prime
ATGGTCTAGAAAGCTTGCGAAGAGCTTGTAGTAGGCACTCTGAATATTGG
TTATCCAATCAATGTAGGCCGACACCTTGGTGTAAATGGAAGGCATGTTG
GCCAGTCCGCAGGGGATGTAGCCCCAGGATACGATGCCAATCAGCTCGGA
GGGGGCGTTTGTGAACTCAACAACCAGGGGGCCGCCGGAGTCACCGTTGC
ATGCAGACTTGCTCTGTTGCAGGGAAGAGGAGCAGATGTTGGACTCAGCG
ATAGGAGCGCTTTCCGGCAGCTCCTCCTTGCACTCCTCGTAGTTCAAAAT
TTGGGTGGTCACAGTCTGCAGGGTCTTGGCGCCCGAGAAGATGTAGGACT
TTGGCTGTCCCCAACCGTACAGGTGGGTCTCTCCCTCATGGACTTGTTCA
CGGCTGGGCAAGGTGGCGGGCTGCACCCACTCGTTGAAGATGAAAGACTC
GTTCACGTGCAGCAGGGCAATGTCGTAGGGCCCAACGCCACCGGTGTACT
TCTCGTGGACGCGGCCAAAGTCAACTTGGCGCTGCTGGGTCAGCTCATCC
ACCTCGGCACGGGTGTGGAGTCCGGCAATGATGCTCATGCCTACTGGCTC
GGAAATGCAATGAGCAGCAGTCACAATCCAGTCCTTGTTAATCAAGGTGC
CTCCGCAGATGTGCGAGTGCTTCAAGTAGTTGGTCGCCAGGGAAACAATG
TACGGGGCGGAGTGGGGTTCTGCCTCCGTGCCGTTGATCACGAAGCCGGT
CGCAAAGCTAGGCACGAGTTTGGCCAGCTTGTCGGAGAGCTTGGCTCCCT
GGGCGGCGGCCACAAGGGCAATAACCAAAGTCACAGTGATCAGTTTCATG
TCGACTGATAACT
BO06892.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-PA | 834 | CG11911-RA | 1..831 | 849..19 | 4155 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:23:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-RA | 970 | CG11911-RA | 28..858 | 849..19 | 4155 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:23:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 320391..321221 | 19..849 | 4155 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:23:33 has no hits.
BO06892.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:02:50 Download gff for
BO06892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-PA | 1..834 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:39:58 Download gff for
BO06892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-PA | 1..834 | 15..849 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:01:41 Download gff for
BO06892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 19..861 | 15..859 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:54:14 Download gff for
BO06892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 19..861 | 15..859 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:54:14 Download gff for
BO06892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 320387..321230 | 15..859 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:01:41 Download gff for
BO06892.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 320387..321230 | 15..859 | 99 | | Plus |
BO06892.5prime Sequence
815 bp (737 high quality bases) assembled on 2005-12-03
> BO06892.5prime
GAAGTTATCAGTCGACATGAAACTGATCACTGTGACTTTGGTTATTGCCC
TTGTGGCCGCCGCCCAGGGAGCCAAGCTCTCCGACAAGCTGGCCAAACTC
GTGCCTAGCTTTGCGACCGGCTTCGTGATCAACGGCACGGAGGCAGAACC
CCACTCCGCCCCGTACATTGTTTCCCTGGCGACCAACTACTTGAAGCACT
CGCACATCTGCGGAGGCACCTTGATTAACAAGGACTGGATTGTGACTGCT
GCTCATTGCATTTCCGAGCCAGTAGGCATGAGCATCATTGCCGGACTCCA
CACCCGTGCCGAGGTGGATGAGCTGACCCAGCAGCGCCAAGTTGACTTTG
GCCGCGTCCACGAGAAGTACACCGGTGGCGTTGGGCCCTACGACATTGCC
CTGCTGCACGTGAACGAGTCTTTCATCTTCAACGAGTGGGTGCAGCCCGC
CACCTTGCCCAGCCGTGAACAAGTCCATGAGGGAGAGACCCACCTGTACG
GTTGGGGACAGCCAAAGTCCTACATCTTCTCGGGCGCCAAGACCCTGCAG
ACTGTGACCACCCAAATTTTGAACTACGAGGAGTGCAAGGAGGAGCTGCC
GGAAAGCGCTCCTATCGCTGAGTCCAACATCTGCTCCTCTTCCCTGCAAC
AGAGCAAGTCTGCATGCAACGGTGACTCCGGCGGCCCCCTGGTTGTTGAG
TTCACAAACGCCCCCTCCGAGCTGATTGGCATCGTATCCTGGGGCTACAT
CCCCTGCGGACTGGCCAACATGCCTTCCATTTACACCAAGGTGTCGGCCT
ACATTGATTGGATAA
BO06892.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-PA | 834 | CG11911-RA | 1..799 | 17..815 | 3995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-RA | 970 | CG11911-RA | 28..826 | 17..815 | 3995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:24:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 320423..321221 | 815..17 | 3995 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:24:27 has no hits.
BO06892.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:02:51 Download gff for
BO06892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-PA | 1..797 | 17..813 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:39:59 Download gff for
BO06892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-PA | 1..797 | 17..813 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:30:25 Download gff for
BO06892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 19..826 | 7..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:56:44 Download gff for
BO06892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 19..826 | 7..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:56:44 Download gff for
BO06892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 320423..321230 | 7..815 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:30:25 Download gff for
BO06892.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 320423..321230 | 7..815 | 99 | | Minus |
BO06892.complete Sequence
865 bp (865 high quality bases) assembled on 2005-11-29
GenBank Submission: FJ630585
> BO06892.complete
GAAGTTATCAGTCGACATGAAACTGATCACTGTGACTTTGGTTATTGCCC
TTGTGGCCGCCGCCCAGGGAGCCAAGCTCTCCGACAAGCTGGCCAAACTC
GTGCCTAGCTTTGCGACCGGCTTCGTGATCAACGGCACGGAGGCAGAACC
CCACTCCGCCCCGTACATTGTTTCCCTGGCGACCAACTACTTGAAGCACT
CGCACATCTGCGGAGGCACCTTGATTAACAAGGACTGGATTGTGACTGCT
GCTCATTGCATTTCCGAGCCAGTAGGCATGAGCATCATTGCCGGACTCCA
CACCCGTGCCGAGGTGGATGAGCTGACCCAGCAGCGCCAAGTTGACTTTG
GCCGCGTCCACGAGAAGTACACCGGTGGCGTTGGGCCCTACGACATTGCC
CTGCTGCACGTGAACGAGTCTTTCATCTTCAACGAGTGGGTGCAGCCCGC
CACCTTGCCCAGCCGTGAACAAGTCCATGAGGGAGAGACCCACCTGTACG
GTTGGGGACAGCCAAAGTCCTACATCTTCTCGGGCGCCAAGACCCTGCAG
ACTGTGACCACCCAAATTTTGAACTACGAGGAGTGCAAGGAGGAGCTGCC
GGAAAGCGCTCCTATCGCTGAGTCCAACATCTGCTCCTCTTCCCTGCAAC
AGAGCAAGTCTGCATGCAACGGTGACTCCGGCGGCCCCCTGGTTGTTGAG
TTCACAAACGCCCCCTCCGAGCTGATTGGCATCGTATCCTGGGGCTACAT
CCCCTGCGGACTGGCCAACATGCCTTCCATTTACACCAAGGTGTCGGCCT
ACATTGATTGGATAACCAATATTCAGAGTGCCTACTACAAGCTCTTCGCA
AGCTTTCTAGACCAT
BO06892.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-RA | 834 | CG11911-PA | 1..831 | 17..847 | 4155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:18:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-RA | 970 | CG11911-RA | 28..858 | 17..847 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:17:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 320391..321221 | 847..17 | 4155 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:17:57 has no hits.
BO06892.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:23 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 1..834 | 17..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:43:24 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 17..859 | 7..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:01 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 28..858 | 17..849 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:23 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 17..859 | 7..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:31 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11911-RA | 28..858 | 17..849 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:31 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 320389..321221 | 17..849 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:01 Download gff for
BO06892.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 320389..321221 | 17..849 | 99 | | Minus |
BO06892.pep Sequence
Translation from 16 to 865
> BO06892.pep
MKLITVTLVIALVAAAQGAKLSDKLAKLVPSFATGFVINGTEAEPHSAPY
IVSLATNYLKHSHICGGTLINKDWIVTAAHCISEPVGMSIIAGLHTRAEV
DELTQQRQVDFGRVHEKYTGGVGPYDIALLHVNESFIFNEWVQPATLPSR
EQVHEGETHLYGWGQPKSYIFSGAKTLQTVTTQILNYEECKEELPESAPI
AESNICSSSLQQSKSACNGDSGGPLVVEFTNAPSELIGIVSWGYIPCGLA
NMPSIYTKVSAYIDWITNIQSAYYKLFASFLDH
BO06892.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11911-PA | 277 | CG11911-PA | 1..277 | 1..277 | 1451 | 100 | Plus |
| CG7142-PA | 334 | CG7142-PA | 85..328 | 42..271 | 467 | 41.6 | Plus |
| CG11912-PA | 271 | CG11912-PA | 23..270 | 30..272 | 459 | 39.9 | Plus |
| CG33127-PA | 284 | CG33127-PA | 35..283 | 26..276 | 451 | 37.8 | Plus |
| Phae1-PB | 270 | CG16996-PB | 34..264 | 35..267 | 409 | 37.2 | Plus |
