Clone Sequence Records
BO06909.3prime Sequence
419 bp (418 high quality bases) assembled on 2005-12-03
> BO06909.3prime
ATGGTCTAGAAAGCTTGCAGAGCTTCTTAGCGATTGAACAAGAGTCCTTG
TGGCACACTCACCCACTCCCGCAGCGGTGACCATGGGAAAGTCCTCCTCC
AGGACCTCCACTTGCCCCCGATCCTTGAGATTGATGTGCAGTCGGCCCAG
ATGATGCTTCTGTCTTAAGTGCATGTAAATGGCGCCGATGATGAGCAGAA
GGGCGATGAAAATGGCGCCCGTACTCAGGACTTGGCGAGTGCAGCAGGAC
CTTCGAGTCCATCGTTTCCGCTTACGACTTTCCCCGGACATTGACAGCGC
TTCGGCATATTCCTGATGCTCCACCACCTTGGACTCATCCGTTTCCACAT
CATCCTCACTGTATTTGGCCAATTCCGCCACACTGCTGCTGCATGTGGGC
TCCATGTCGACTGATAACT
BO06909.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-PD | 390 | CG14823-RD | 1..387 | 405..19 | 1935 | 100 | Minus |
CG14823-PA | 792 | CG14823-RA | 1..343 | 405..63 | 1715 | 100 | Minus |
CG14823-PB | 351 | CG14823-RB | 1..343 | 405..63 | 1715 | 100 | Minus |
CG14823-PC | 351 | CG14823-RC | 1..343 | 405..63 | 1715 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:25:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-RD | 1108 | CG14823-RD | 66..457 | 410..19 | 1945 | 99.7 | Minus |
CG14823-RB | 974 | CG14823-RB | 66..417 | 410..59 | 1730 | 99.4 | Minus |
CG14823-RA | 2098 | CG14823-RA | 66..413 | 410..63 | 1725 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:25:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7066379..7066770 | 410..19 | 1945 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:25:22 has no hits.
BO06909.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:20 Download gff for
BO06909.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-PD | 1..390 | 18..405 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:33 Download gff for
BO06909.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-PD | 1..390 | 18..405 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:30:30 Download gff for
BO06909.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 62..464 | 11..413 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:59:09 Download gff for
BO06909.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 62..464 | 11..413 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:59:09 Download gff for
BO06909.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7066375..7066777 | 11..413 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:30:30 Download gff for
BO06909.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7059475..7059877 | 11..413 | 98 | | Minus |
BO06909.5prime Sequence
419 bp (418 high quality bases) assembled on 2005-12-03
> BO06909.5prime
GAAGTTATCAGTCGACATGGAGCCCACATGCAGCAGCAGTGTGGCGGAAT
TGGCCAAATACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTG
GAGCATCAGGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAA
GCGGAAACGATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTA
CGGGCGCCATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATG
CACTTAAGACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGA
TCGGGGGCAAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTG
CGGGAGTGGGTGAGTGTGCCACAAGGACTCTTGTTCAATCGCTAAGAAGC
TCTGCAAGCTTTCTAGACC
BO06909.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-PD | 390 | CG14823-RD | 1..387 | 17..403 | 1935 | 100 | Plus |
CG14823-PA | 792 | CG14823-RA | 1..343 | 17..359 | 1715 | 100 | Plus |
CG14823-PB | 351 | CG14823-RB | 1..343 | 17..359 | 1715 | 100 | Plus |
CG14823-PC | 351 | CG14823-RC | 1..343 | 17..359 | 1715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:13:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-RD | 1108 | CG14823-RD | 66..457 | 12..403 | 1945 | 99.7 | Plus |
CG14823-RB | 974 | CG14823-RB | 66..417 | 12..363 | 1730 | 99.4 | Plus |
CG14823-RA | 2098 | CG14823-RA | 66..413 | 12..359 | 1725 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:13:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7066379..7066770 | 12..403 | 1945 | 99.7 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:13:32 has no hits.
BO06909.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:21 Download gff for
BO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-PD | 1..390 | 17..404 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:34 Download gff for
BO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-PD | 1..390 | 17..404 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:09:45 Download gff for
BO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 62..464 | 9..411 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:47:07 Download gff for
BO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 62..464 | 9..411 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:47:07 Download gff for
BO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7066375..7066777 | 9..411 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:09:45 Download gff for
BO06909.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7059475..7059877 | 9..411 | 98 | | Plus |
BO06909.complete Sequence
421 bp (421 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630590
> BO06909.complete
GAAGTTATCAGTCGACATGGAGCCCACATGCAGCAGCAGTGTGGCGGAAT
TGGCCAAATACAGTGAGGATGATGTGGAAACGGATGAGTCCAAGGTGGTG
GAGCATCAGGAATATGCCGAAGCGCTGTCAATGTCCGGGGAAAGTCGTAA
GCGGAAACGATGGACTCGAAGGTCCTGCTGCACTCGCCAAGTCCTGAGTA
CGGGCGCCATTTTCATCGCCCTTCTGCTCATCATCGGCGCCATTTACATG
CACTTAAGACAGAAGCATCATCTGGGCCGACTGCACATCAATCTCAAGGA
TCGGGGGCAAGTGGAGGTCCTGGAGGAGGACTTTCCCATGGTCACCGCTG
CGGGAGTGGGTGAGTGTGCCACAAGGACTCTTGTTCAATCGCTAAGAAGC
TCTGCAAGCTTTCTAGACCAT
BO06909.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:45:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-RD | 390 | CG14823-PD | 1..387 | 17..403 | 1935 | 100 | Plus |
CG14823-RB | 351 | CG14823-PB | 1..347 | 17..363 | 1720 | 99.7 | Plus |
CG14823-RA | 792 | CG14823-PA | 1..343 | 17..359 | 1715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:45:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-RD | 1108 | CG14823-RD | 66..457 | 12..403 | 1945 | 99.7 | Plus |
CG14823-RB | 974 | CG14823-RB | 66..417 | 12..363 | 1730 | 99.4 | Plus |
CG14823-RA | 2098 | CG14823-RA | 66..413 | 12..359 | 1725 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7066379..7066770 | 12..403 | 1945 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:45:33 has no hits.
BO06909.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:05 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 1..390 | 17..404 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:14 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 62..464 | 9..411 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:05 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 71..457 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:05 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 62..464 | 9..411 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:32 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14823-RD | 71..457 | 17..405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:32 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7066384..7066770 | 17..405 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:05 Download gff for
BO06909.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7059484..7059870 | 17..405 | 99 | | Plus |
BO06909.pep Sequence
Translation from 16 to 421
> BO06909.pep
MEPTCSSSVAELAKYSEDDVETDESKVVEHQEYAEALSMSGESRKRKRWT
RRSCCTRQVLSTGAIFIALLLIIGAIYMHLRQKHHLGRLHINLKDRGQVE
VLEEDFPMVTAAGVGECATRTLVQSLRSSASFLDH
BO06909.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14823-PD | 129 | CG14823-PD | 1..129 | 1..129 | 655 | 100 | Plus |
CG14823-PB | 116 | CG14823-PB | 1..116 | 1..116 | 584 | 98.3 | Plus |
CG14823-PA | 263 | CG14823-PA | 1..114 | 1..114 | 582 | 100 | Plus |