Clone Sequence Records
BO06910.5prime Sequence
587 bp (586 high quality bases) assembled on 2005-12-03
> BO06910.5prime
GAAGTTATCAGTCGACATGGCTGATCGTCCGTGTGCTGGAAACATTCTCC
GCATCGCCGGGGCCGTGATTCTGCCCAATCTGGGCGGCATCTATAACGGG
CGGCTGACCAGGCAGCATCTCCAGAGCTGGTACGCCAACCTTAAGTTCCC
GTCCTTCAAGCCGCCCAACTCGGTCTTTGCGCCGATGTGGATCTCCTTGT
ACGCGGGAATGGGCTACGGCTCCTACCTGGTGTGGCGTGATGGCGGAGGC
TTCGCCGGCGAGGCGGCCAAACTGCCCCTGATCGCGTACGGCACCCAGCT
GGCCTTGAACTGGGCGTGGACGCCCATTTTCTTCGGGCAGCACAACATCA
AGGGCGGCCTTATTGACATAGTTGCACTCACGGCCGCCGCGTCCGCCTGC
GGCGTTCTGTTCTACCGAGTGAACAAGACCGCTGGATTGCTCTTCGTACC
CTACGTCGCCTGGCTGGGATTCGCGACGGCTCTGAACTACGCCATCTGGA
AGCTGAACCCGGAGAAGGAGCAGGCGCCCAAGGACGAGGAGAAGCCCTCT
AGCAGCCACGCTAAGTCGAGTGCAAGCTTTCTAGACC
BO06910.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-PA | 558 | CG2789-RA | 1..555 | 17..571 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:08:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-RA | 853 | CG2789-RA | 88..642 | 17..571 | 2775 | 100 | Plus |
rempA-RC | 5308 | CG11838-RC | 273..612 | 356..17 | 1700 | 100 | Minus |
rempA-RC | 5308 | CG11838-RC | 1..214 | 569..356 | 1070 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:08:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 559699..560038 | 17..356 | 1700 | 100 | Plus |
2L | 23513712 | 2L | 560097..560312 | 356..571 | 1080 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:08:11 has no hits.
BO06910.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:22 Download gff for
BO06910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-PA | 1..558 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:37 Download gff for
BO06910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-PA | 1..558 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:20:28 Download gff for
BO06910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 88..647 | 17..577 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:30:48 Download gff for
BO06910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 88..647 | 17..577 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:30:48 Download gff for
BO06910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 560097..560317 | 356..577 | 99 | | Plus |
2L | 559699..560037 | 17..355 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:20:28 Download gff for
BO06910.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 559699..560037 | 17..355 | 100 | -> | Plus |
arm_2L | 560097..560317 | 356..577 | 99 | | Plus |
BO06910.3prime Sequence
587 bp (586 high quality bases) assembled on 2005-12-03
> BO06910.3prime
ATGGTCTAGAAAGCTTGCACTCGACTTAGCGTGGCTGCTAGAGGGCTTCT
CCTCGTCCTTGGGCGCCTGCTCCTTCTCCGGGTTCAGCTTCCAGATGGCG
TAGTTCAGAGCCGTCGCGAATCCCAGCCAGGCGACGTAGGGTACGAAGAG
CAATCCAGCGGTCTTGTTCACTCGGTAGAACAGAACGCCGCAGGCGGACG
CGGCGGCCGTGAGTGCAACTATGTCAATAAGGCCGCCCTTGATGTTGTGC
TGCCCGAAGAAAATGGGCGTCCACGCCCAGTTCAAGGCCAGCTGGGTGCC
GTACGCGATCAGGGGCAGTTTGGCCGCCTCGCCGGCGAAGCCTCCGCCAT
CACGCCACACCAGGTAGGAGCCGTAGCCCATTCCCGCGTACAAGGAGATC
CACATCGGCGCAAAGACCGAGTTGGGCGGCTTGAAGGACGGGAACTTAAG
GTTGGCGTACCAGCTCTGGAGATGCTGCCTGGTCAGCCGCCCGTTATAGA
TGCCGCCCAGATTGGGCAGAATCACGGCCCCGGCGATGCGGAGAATGTTT
CCAGCACACGGACGATCAGCCATGTCGACTGATAACT
BO06910.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-PA | 558 | CG2789-RA | 1..555 | 573..19 | 2775 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:14:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-RA | 853 | CG2789-RA | 88..642 | 573..19 | 2775 | 100 | Minus |
rempA-RC | 5308 | CG11838-RC | 273..612 | 234..573 | 1700 | 100 | Plus |
rempA-RC | 5308 | CG11838-RC | 1..214 | 21..234 | 1070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:13:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 559699..560038 | 573..234 | 1700 | 100 | Minus |
2L | 23513712 | 2L | 560097..560312 | 234..19 | 1080 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-04 20:14:03 has no hits.
BO06910.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:21 Download gff for
BO06910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-PA | 1..558 | 15..573 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:36 Download gff for
BO06910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-PA | 1..558 | 15..573 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:23:27 Download gff for
BO06910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 88..647 | 13..573 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:46:59 Download gff for
BO06910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 88..647 | 13..573 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:46:59 Download gff for
BO06910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 559699..560037 | 235..573 | 100 | -> | Minus |
2L | 560097..560317 | 13..234 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:23:27 Download gff for
BO06910.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 559699..560037 | 235..573 | 100 | -> | Minus |
arm_2L | 560097..560317 | 13..234 | 99 | | Minus |
BO06910.complete Sequence
589 bp (589 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630591
> BO06910.complete
GAAGTTATCAGTCGACATGGCTGATCGTCCGTGTGCTGGAAACATTCTCC
GCATCGCCGGGGCCGTGATTCTGCCCAATCTGGGCGGCATCTATAACGGG
CGGCTGACCAGGCAGCATCTCCAGAGCTGGTACGCCAACCTTAAGTTCCC
GTCCTTCAAGCCGCCCAACTCGGTCTTTGCGCCGATGTGGATCTCCTTGT
ACGCGGGAATGGGCTACGGCTCCTACCTGGTGTGGCGTGATGGCGGAGGC
TTCGCCGGCGAGGCGGCCAAACTGCCCCTGATCGCGTACGGCACCCAGCT
GGCCTTGAACTGGGCGTGGACGCCCATTTTCTTCGGGCAGCACAACATCA
AGGGCGGCCTTATTGACATAGTTGCACTCACGGCCGCCGCGTCCGCCTGC
GGCGTTCTGTTCTACCGAGTGAACAAGACCGCTGGATTGCTCTTCGTACC
CTACGTCGCCTGGCTGGGATTCGCGACGGCTCTGAACTACGCCATCTGGA
AGCTGAACCCGGAGAAGGAGCAGGCGCCCAAGGACGAGGAGAAGCCCTCT
AGCAGCCACGCTAAGTCGAGTGCAAGCTTTCTAGACCAT
BO06910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:45:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-RA | 558 | CG2789-PA | 1..555 | 17..571 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:45:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-RA | 853 | CG2789-RA | 88..642 | 17..571 | 2775 | 100 | Plus |
rempA-RC | 5308 | CG11838-RC | 273..612 | 356..17 | 1700 | 100 | Minus |
rempA-RC | 5308 | CG11838-RC | 1..214 | 569..356 | 1070 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:45:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 559699..560038 | 17..356 | 1700 | 100 | Plus |
2L | 23513712 | 2L | 560097..560312 | 356..571 | 1080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:45:38 has no hits.
BO06910.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:58 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 1..558 | 17..575 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:51 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 89..648 | 17..577 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:08 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 88..642 | 17..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:58 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 89..648 | 17..577 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:18:04 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2789-RA | 88..642 | 17..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:18:04 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 559699..560037 | 17..355 | 100 | -> | Plus |
2L | 560097..560312 | 356..573 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:08 Download gff for
BO06910.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 559699..560037 | 17..355 | 100 | -> | Plus |
arm_2L | 560097..560312 | 356..573 | 99 | | Plus |
BO06910.pep Sequence
Translation from 16 to 589
> BO06910.pep
MADRPCAGNILRIAGAVILPNLGGIYNGRLTRQHLQSWYANLKFPSFKPP
NSVFAPMWISLYAGMGYGSYLVWRDGGGFAGEAAKLPLIAYGTQLALNWA
WTPIFFGQHNIKGGLIDIVALTAAASACGVLFYRVNKTAGLLFVPYVAWL
GFATALNYAIWKLNPEKEQAPKDEEKPSSSHAKSSASFLDH
BO06910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2789-PA | 185 | CG2789-PA | 1..185 | 1..185 | 993 | 100 | Plus |