Clone BO06913 Report

Search the DGRC for BO06913

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:69
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG31546-RA
Protein status:BO06913.pep: validated full length
Sequenced Size:826

Clone Sequence Records

BO06913.3prime Sequence

824 bp (823 high quality bases) assembled on 2005-12-03

> BO06913.3prime
ATGGTCTAGAAAGCTTGCGCGCGGACACATGACCTGCTTGCCACCGTCCA
CAGGAAGGGTCACGCCGGTCACGAAGCTGGCCAGCTCGCTGGCCAGGAAG
CAAATGGCGGCCGCCACCTCCTTTGGCTCCCCAATCCGGCCCAGGGCGTG
GGTCTTCTTCGAGTGCTCCAGAAATTCGGCGTAGCTCTGCTCGTCCATGC
CCCCCGCCTTTTGCAGATTGGTGCGAATCACACCCGGATTGACCGCATTC
ACCCGAACACCCTGGGGACCCAGATCCAGGGCAAGGGAGCGGGTAAACTG
GTCCACCGCCGCCTTGGACATGTTGTAGGCCACCAGATTGGGAAAAGCGC
GAAGTCCGCAGACGCTGGACACGTTGACAATGCTGCCCTTACACTGCAGC
AACTGGGGCAGCAGCAACTTGGTCAGATAAAACCCAGAACGCACATTGGC
CTCCATCACGTGGGTGAAGCAGGCCAGTTCCGTGCTCTGCAGCGTTCCCG
TGGGCATGATGCCAGCCCCATTTACCAGCACATCCAGCTTGCCCTCGTAG
CGCTCCGTGGTCTTCCGCGCAATGCATTCGATCTCCGGAGGCTTGAGCAG
ATCTCCGGCTATGCCGTACGGCTCGTGGCCCATCTTCATGCAGCGTTTCA
TCACACATATGAGGCCCTCCTCCTCCCGATCCACCAGGGCCAGGCAGGCA
CCCAGCTTCGAGAACATCTCCGCCGCGGCGGCCCCGATCCCGGAGGCTGC
GCCCGTGATAAGCACCACTTTGCCGGAGAAGTCCAGACCAGCCTTGCCCT
TGCTGCCCATGTCGACTGATAACT

BO06913.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-PA 795 CG31546-RA 1..792 810..19 3960 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-RA 999 CG31546-RA 63..854 810..19 3960 100 Minus
CG31549-RB 991 CG31549-RB 465..782 390..73 390 75.6 Minus
CG31549-RA 1130 CG31549-RA 604..921 390..73 390 75.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5634771..5635562 19..810 3960 100 Plus
3R 32079331 3R 5632795..5633112 390..73 390 74.8 Minus
Blast to na_te.dros performed on 2015-02-09 19:22:32 has no hits.

BO06913.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:28 Download gff for BO06913.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-PA 1..795 18..810 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:44 Download gff for BO06913.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-PA 1..795 18..810 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:07:10 Download gff for BO06913.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 53..854 19..822 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:18:59 Download gff for BO06913.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 53..854 19..822 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:18:59 Download gff for BO06913.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5634771..5635572 19..822 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:07:10 Download gff for BO06913.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1460493..1461294 19..822 99   Plus

BO06913.5prime Sequence

824 bp (823 high quality bases) assembled on 2005-12-03

> BO06913.5prime
GAAGTTATCAGTCGACATGGGCAGCAAGGGCAAGGCTGGTCTGGACTTCT
CCGGCAAAGTGGTGCTTATCACGGGCGCAGCCTCCGGGATCGGGGCCGCC
GCGGCGGAGATGTTCTCGAAGCTGGGTGCCTGCCTGGCCCTGGTGGATCG
GGAGGAGGAGGGCCTCATATGTGTGATGAAACGCTGCATGAAGATGGGCC
ACGAGCCGTACGGCATAGCCGGAGATCTGCTCAAGCCTCCGGAGATCGAA
TGCATTGCGCGGAAGACCACGGAGCGCTACGAGGGCAAGCTGGATGTGCT
GGTAAATGGGGCTGGCATCATGCCCACGGGAACGCTGCAGAGCACGGAAC
TGGCCTGCTTCACCCACGTGATGGAGGCCAATGTGCGTTCTGGGTTTTAT
CTGACCAAGTTGCTGCTGCCCCAGTTGCTGCAGTGTAAGGGCAGCATTGT
CAACGTGTCCAGCGTCTGCGGACTTCGCGCTTTTCCCAATCTGGTGGCCT
ACAACATGTCCAAGGCGGCGGTGGACCAGTTTACCCGCTCCCTTGCCCTG
GATCTGGGTCCCCAGGGTGTTCGGGTGAATGCGGTCAATCCGGGTGTGAT
TCGCACCAATCTGCAAAAGGCGGGGGGCATGGACGAGCAGAGCTACGCCG
AATTTCTGGAGCACTCGAAGAAGACCCACGCCCTGGGCCGGATTGGGGAG
CCAAAGGAGGTGGCGGCCGCCATTTGCTTCCTGGCCAGCGAGCTGGCCAG
CTTCGTGACCGGCGTGACCCTTCCTGTGGACGGTGGCAAGCAGGTCATGT
GTCCGCGCGCAAGCTTTCTAGACC

BO06913.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-PA 795 CG31546-RA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:06:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-RA 999 CG31546-RA 63..854 17..808 3960 100 Plus
CG31549-RB 991 CG31549-RB 465..782 437..754 390 75.6 Plus
CG31549-RA 1130 CG31549-RA 604..921 437..754 390 75.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5634771..5635562 808..17 3960 100 Minus
3R 32079331 3R 5632795..5633112 437..754 390 74.8 Plus
Blast to na_te.dros performed on 2015-02-12 07:06:25 has no hits.

BO06913.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:30 Download gff for BO06913.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-PA 1..795 17..809 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:45 Download gff for BO06913.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-PA 1..795 17..809 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:34:22 Download gff for BO06913.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 53..854 5..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:16:39 Download gff for BO06913.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 53..854 5..808 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:16:39 Download gff for BO06913.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5634771..5635572 5..808 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:34:22 Download gff for BO06913.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1460493..1461294 5..808 99   Minus

BO06913.complete Sequence

826 bp (826 high quality bases) assembled on 2005-12-09

GenBank Submission: FJ630593

> BO06913.complete
GAAGTTATCAGTCGACATGGGCAGCAAGGGCAAGGCTGGTCTGGACTTCT
CCGGCAAAGTGGTGCTTATCACGGGCGCAGCCTCCGGGATCGGGGCCGCC
GCGGCGGAGATGTTCTCGAAGCTGGGTGCCTGCCTGGCCCTGGTGGATCG
GGAGGAGGAGGGCCTCATATGTGTGATGAAACGCTGCATGAAGATGGGCC
ACGAGCCGTACGGCATAGCCGGAGATCTGCTCAAGCCTCCGGAGATCGAA
TGCATTGCGCGGAAGACCACGGAGCGCTACGAGGGCAAGCTGGATGTGCT
GGTAAATGGGGCTGGCATCATGCCCACGGGAACGCTGCAGAGCACGGAAC
TGGCCTGCTTCACCCACGTGATGGAGGCCAATGTGCGTTCTGGGTTTTAT
CTGACCAAGTTGCTGCTGCCCCAGTTGCTGCAGTGTAAGGGCAGCATTGT
CAACGTGTCCAGCGTCTGCGGACTTCGCGCTTTTCCCAATCTGGTGGCCT
ACAACATGTCCAAGGCGGCGGTGGACCAGTTTACCCGCTCCCTTGCCCTG
GATCTGGGTCCCCAGGGTGTTCGGGTGAATGCGGTCAATCCGGGTGTGAT
TCGCACCAATCTGCAAAAGGCGGGGGGCATGGACGAGCAGAGCTACGCCG
AATTTCTGGAGCACTCGAAGAAGACCCACGCCCTGGGCCGGATTGGGGAG
CCAAAGGAGGTGGCGGCCGCCATTTGCTTCCTGGCCAGCGAGCTGGCCAG
CTTCGTGACCGGCGTGACCCTTCCTGTGGACGGTGGCAAGCAGGTCATGT
GTCCGCGCGCAAGCTTTCTAGACCAT

BO06913.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:16:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-RA 795 CG31546-PA 1..792 17..808 3960 100 Plus
CG31549-RB 774 CG31549-PB 400..717 437..754 390 74.8 Plus
CG31549-RA 774 CG31549-PA 400..717 437..754 390 74.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-RA 999 CG31546-RA 63..854 17..808 3960 100 Plus
CG31549-RB 991 CG31549-RB 465..782 437..754 390 74.8 Plus
CG31549-RA 1130 CG31549-RA 604..921 437..754 390 74.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:28
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5634771..5635562 808..17 3960 100 Minus
3R 32079331 3R 5632795..5633112 437..754 390 74.8 Plus
Blast to na_te.dros performed on 2014-11-27 08:16:29 has no hits.

BO06913.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:20:00 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 1..795 17..809 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:42:54 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 53..854 5..808 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:09:19 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 63..854 17..810 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:20:00 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 53..854 5..808 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:37 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
CG31546-RA 63..854 17..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:37 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5634769..5635562 17..810 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:09:19 Download gff for BO06913.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1460491..1461284 17..810 99   Minus

BO06913.pep Sequence

Translation from 16 to 826

> BO06913.pep
MGSKGKAGLDFSGKVVLITGAASGIGAAAAEMFSKLGACLALVDREEEGL
ICVMKRCMKMGHEPYGIAGDLLKPPEIECIARKTTERYEGKLDVLVNGAG
IMPTGTLQSTELACFTHVMEANVRSGFYLTKLLLPQLLQCKGSIVNVSSV
CGLRAFPNLVAYNMSKAAVDQFTRSLALDLGPQGVRVNAVNPGVIRTNLQ
KAGGMDEQSYAEFLEHSKKTHALGRIGEPKEVAAAICFLASELASFVTGV
TLPVDGGKQVMCPRASFLDH

BO06913.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31546-PA 264 CG31546-PA 1..264 1..264 1349 100 Plus
CG31548-PA 256 CG31548-PA 1..256 9..264 716 57.6 Plus
CG31549-PB 257 CG31549-PB 4..257 11..264 706 56.5 Plus
CG31549-PA 257 CG31549-PA 4..257 11..264 706 56.5 Plus
CG12171-PA 257 CG12171-PA 4..257 11..264 672 52.9 Plus