Clone Sequence Records
BO06919.3prime Sequence
584 bp (583 high quality bases) assembled on 2005-12-03
> BO06919.3prime
ATGGTCTAGAAAGCTTGCCGGATGGTACTGTCCATCTTCGATCTCTCCAT
GCTCAGATTGAGCGGCCAGCGCCAGACGCTGTGCCTCCTGTTGGCGTCCA
ATGGCCGCGTGCTCGGCAGCGATCCGCTCGAAGGCGCTCAGGTGCTTCTG
GGTGGCATGTGCAACGGCGGCGCTGGCATGGGGGGCATTTGCTAGTGCAA
CTTGGCCTGGCGTGTGGTTGGCATGCTCTTGCGCAATCCGATTGTAGGCC
GCGAAGTGCCTTTGCTTGGCTGCCTGGACGGCGGCGCTGTCCTCCAGTTT
GTGGCTAAGCTGAGGATGGAAACCATGCTCATCCGCCACATACTGTACGG
TGCGCACCTGGTTCTTTGGGTCCACATAGGAGAAAGCACCGCGGATCACA
CCCGATCCATCGGACACCTCGGTATGCTGGCGATCCACATGGCCGGGAGC
ACGGCCAGCTTGGTAGCTGAACACATACGGACTTGCTGGAACCTTCGGTT
CCGGGGTGACCAGATGGGACACATCGGCCGCAGCGACTGCCAGCAAACAA
ACGACCAAAACTATAAACATGTCGACTGATAACT
BO06919.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18066-PA | 555 | CG18066-RA | 1..552 | 570..19 | 2760 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:08:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57d-RB | 1488 | CG30150-RB | 50..602 | 571..19 | 2765 | 100 | Minus |
Cpr57A-RB | 1488 | CG18066-RB | 50..602 | 571..19 | 2765 | 100 | Minus |
Cpr57A-RA | 656 | CG18066-RA | 50..602 | 571..19 | 2765 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 05:08:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20549631..20549989 | 198..556 | 1795 | 100 | Plus |
2R | 25286936 | 2R | 20549382..20549561 | 19..198 | 900 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 05:08:15 has no hits.
BO06919.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:39 Download gff for
BO06919.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18066-PA | 1..555 | 18..570 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:57 Download gff for
BO06919.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18066-PA | 1..555 | 18..570 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:20:30 Download gff for
BO06919.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RA | 43..602 | 19..578 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 09:31:06 Download gff for
BO06919.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RA | 43..602 | 19..578 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 09:31:06 Download gff for
BO06919.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20549382..20549561 | 19..198 | 100 | <- | Plus |
2R | 20549632..20549988 | 199..555 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:20:30 Download gff for
BO06919.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16436887..16437066 | 19..198 | 100 | <- | Plus |
arm_2R | 16437137..16437493 | 199..555 | 100 | <- | Plus |
BO06919.5prime Sequence
584 bp (583 high quality bases) assembled on 2005-12-03
> BO06919.5prime
GAAGTTATCAGTCGACATGTTTATAGTTTTGGTCGTTTGTTTGCTGGCAG
TCGCTGCGGCCGATGTGTCCCATCTGGTCACCCCGGAACCGAAGGTTCCA
GCAAGTCCGTATGTGTTCAGCTACCAAGCTGGCCGTGCTCCCGGCCATGT
GGATCGCCAGCATACCGAGGTGTCCGATGGATCGGGTGTGATCCGCGGTG
CTTTCTCCTATGTGGACCCAAAGAACCAGGTGCGCACCGTACAGTATGTG
GCGGATGAGCATGGTTTCCATCCTCAGCTTAGCCACAAACTGGAGGACAG
CGCCGCCGTCCAGGCAGCCAAGCAAAGGCACTTCGCGGCCTACAATCGGA
TTGCGCAAGAGCATGCCAACCACACGCCAGGCCAAGTTGCACTAGCAAAT
GCCCCCCATGCCAGCGCCGCCGTTGCACATGCCACCCAGAAGCACCTGAG
CGCCTTCGAGCGGATCGCTGCCGAGCACGCGGCCATTGGACGCCAACAGG
AGGCACAGCGTCTGGCGCTGGCCGCTCAATCTGAGCATGGAGAGATCGAA
GATGGACAGTACCATCCGGCAAGCTTTCTAGACC
BO06919.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 12:51:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18066-PA | 555 | CG18066-RA | 1..552 | 17..568 | 2760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 23:07:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57d-RB | 1488 | CG30150-RB | 50..602 | 16..568 | 2765 | 100 | Plus |
Cpr57A-RB | 1488 | CG18066-RB | 50..602 | 16..568 | 2765 | 100 | Plus |
Cpr57A-RA | 656 | CG18066-RA | 50..602 | 16..568 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 23:07:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20549631..20549989 | 389..31 | 1795 | 100 | Minus |
2R | 25286936 | 2R | 20549382..20549561 | 568..389 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 23:07:45 has no hits.
BO06919.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:03:40 Download gff for
BO06919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18066-PA | 1..555 | 17..569 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 01:40:58 Download gff for
BO06919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18066-PA | 1..555 | 17..569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:45:54 Download gff for
BO06919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RA | 43..602 | 9..568 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:48:55 Download gff for
BO06919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RA | 43..602 | 9..568 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:48:55 Download gff for
BO06919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20549382..20549561 | 389..568 | 100 | <- | Minus |
2R | 20549632..20549988 | 32..388 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:45:54 Download gff for
BO06919.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16436887..16437066 | 389..568 | 100 | <- | Minus |
arm_2R | 16437137..16437493 | 32..388 | 100 | <- | Minus |
BO06919.complete Sequence
586 bp (586 high quality bases) assembled on 2005-12-09
GenBank Submission: FJ630594
> BO06919.complete
GAAGTTATCAGTCGACATGTTTATAGTTTTGGTCGTTTGTTTGCTGGCAG
TCGCTGCGGCCGATGTGTCCCATCTGGTCACCCCGGAACCGAAGGTTCCA
GCAAGTCCGTATGTGTTCAGCTACCAAGCTGGCCGTGCTCCCGGCCATGT
GGATCGCCAGCATACCGAGGTGTCCGATGGATCGGGTGTGATCCGCGGTG
CTTTCTCCTATGTGGACCCAAAGAACCAGGTGCGCACCGTACAGTATGTG
GCGGATGAGCATGGTTTCCATCCTCAGCTTAGCCACAAACTGGAGGACAG
CGCCGCCGTCCAGGCAGCCAAGCAAAGGCACTTCGCGGCCTACAATCGGA
TTGCGCAAGAGCATGCCAACCACACGCCAGGCCAAGTTGCACTAGCAAAT
GCCCCCCATGCCAGCGCCGCCGTTGCACATGCCACCCAGAAGCACCTGAG
CGCCTTCGAGCGGATCGCTGCCGAGCACGCGGCCATTGGACGCCAACAGG
AGGCACAGCGTCTGGCGCTGGCCGCTCAATCTGAGCATGGAGAGATCGAA
GATGGACAGTACCATCCGGCAAGCTTTCTAGACCAT
BO06919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:07:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr57A-RB | 555 | CG18066-PB | 1..552 | 17..568 | 2760 | 100 | Plus |
Cpr57A-RA | 555 | CG18066-PA | 1..552 | 17..568 | 2760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp57d-RB | 1488 | CG30150-RB | 50..602 | 16..568 | 2765 | 100 | Plus |
Cpr57A-RB | 1488 | CG18066-RB | 50..602 | 16..568 | 2765 | 100 | Plus |
Cpr57A-RA | 656 | CG18066-RA | 50..602 | 16..568 | 2765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20549631..20549989 | 389..31 | 1795 | 100 | Minus |
2R | 25286936 | 2R | 20549382..20549561 | 568..389 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:07:52 has no hits.
BO06919.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:04:25 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RB | 1..555 | 17..569 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:23:35 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57d-RB | 18..577 | 9..568 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:39:53 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RA | 57..602 | 23..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:04:25 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp57d-RB | 18..577 | 9..568 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:45:21 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cpr57A-RA | 57..602 | 23..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:45:21 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20549380..20549561 | 389..570 | 98 | <- | Minus |
2R | 20549632..20549996 | 23..388 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:39:53 Download gff for
BO06919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16436885..16437066 | 389..570 | 98 | <- | Minus |
arm_2R | 16437137..16437501 | 23..388 | 98 | | Minus |
BO06919.pep Sequence
Translation from 16 to 586
> BO06919.pep
MFIVLVVCLLAVAAADVSHLVTPEPKVPASPYVFSYQAGRAPGHVDRQHT
EVSDGSGVIRGAFSYVDPKNQVRTVQYVADEHGFHPQLSHKLEDSAAVQA
AKQRHFAAYNRIAQEHANHTPGQVALANAPHASAAVAHATQKHLSAFERI
AAEHAAIGRQQEAQRLALAAQSEHGEIEDGQYHPASFLDH
BO06919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:04:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cpr57A-PB | 184 | CG18066-PB | 1..184 | 1..184 | 949 | 100 | Plus |
Cpr57A-PA | 184 | CG18066-PA | 1..184 | 1..184 | 949 | 100 | Plus |